4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on WT Col-0 Bgh inoculated
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "WT Col-0 Bgh inoculated"  Help Download transcriptome of top 30
Score Experiment Correlation from
WT Col-0 Bgh inoculated		 Correlation to
WT Col-0 Bgh inoculated		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 WT Col-0 Bgh inoculated 1.00 >More info 1.00 >More info WT Col-0 Un-inoculated Original data GEO bulk
2 ataf1-1 mutant Col-0 Bgh inoculated 0.92 >More info 0.91 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
3 Col-0 9 hpi A. brassicicola 0.85 >More info 0.80 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
4 B.cinerea 18 h infection 0.83 >More info 0.81 >More info Mock 18 h Original data Botrytis cinerea infection
5 Botrytis cinerea 18h 0.83 >More info 0.81 >More info control 18h Original data GEO bulk
6 AvrRpt2 Col-0 6hpi 0.84 >More info 0.79 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
7 Shoot -Cs 0.77 >More info 0.86 >More info Control-shoot Original data GEO bulk
8 col-5 hrpA 12h 0.81 >More info 0.82 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
9 ein2-1 9 hpi A. brassicicola 0.84 >More info 0.78 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
10 Col ozone 3h 0.79 >More info 0.83 >More info Col clean-air 3h ozone Original data GEO bulk
11 hrcC 0.81 >More info 0.80 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
12 hrpA 7h 0.81 >More info 0.80 >More info Mock 7h hrpA Original data GEO bulk
13 flu over-tAPX 0.81 >More info 0.80 >More info WT Col Original data GEO bulk
14 GST NPP1 4 h (leaf) 0.80 >More info 0.80 >More info Mock 4 h (leaf) Original data Elicitor treatments
15 HopZ1a treated 0.81 >More info 0.79 >More info col Original data GEO bulk
16 flu 0.81 >More info 0.78 >More info WT Col Original data GEO bulk
17 anac017-2 AntimycinA 3h -0.80 >More info -0.79 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
18 col-5 DC3000 12h 0.79 >More info 0.79 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
19 Cor hrpS 10h 0.79 >More info 0.78 >More info Mock 10h Cor hrpS Original data GEO bulk
20 35S:RPS4 eds1-2 8h -0.80 >More info -0.77 >More info 35S:RPS4 8h leaves Original data
21 Col-0-avrB-6h 0.80 >More info 0.76 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
22 E.coli TUV86 2 fliC 7h 0.78 >More info 0.77 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
23 Col whole leaf 7dpi 0.80 >More info 0.75 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
24 hrpA fliC 7h 0.80 >More info 0.75 >More info Mock 7h hrpA fliC Original data GEO bulk
25 35S::ERF104 Flg22 4h 0.76 >More info 0.79 >More info 35S::ERF104 H2O 4h Original data GEO bulk
26 P.syringae AvrRpt2 4 h (leaf) 0.71 >More info 0.84 >More info Mock 4 h (leaf) Original data Elicitor treatments
27 Elevated CO2 AMPLE N NIGHT 0.77 >More info 0.77 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
28 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.85 >More info 0.69 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
29 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.86 >More info 0.68 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
30 WT-SA 0.79 >More info 0.75 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
31 WT flg22 2h 0.76 >More info 0.78 >More info WT 0h Leaf tissue Original data GEO bulk
32 Phaseolicola 2 h (leaf) 0.74 >More info 0.79 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
33 HopZ1a treated ulp1c ulp1d 0.79 >More info 0.74 >More info col Original data GEO bulk
34 Laer Flg22 2h 0.78 >More info 0.75 >More info Laer Control leaf discs Original data GEO bulk
35 coi1-16 ein2 sid2 ctrl -0.85 >More info -0.68 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
36 Col whole leaf 5dpi 0.78 >More info 0.75 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
37 sid2-2 9 hpi A. brassicicola 0.81 >More info 0.72 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
38 Botrytis cinerea 48h 0.84 >More info 0.69 >More info control 48h Original data GEO bulk
39 ice1 control 0.73 >More info 0.79 >More info WT control Original data GEO bulk
40 Col-0 ozone 0.85 >More info 0.67 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
41 DFPM 0.80 >More info 0.72 >More info control Original data GEO bulk
42 Cor 10h 0.76 >More info 0.76 >More info Mock 10h Cor Original data GEO bulk
43 E.coli 0157 H7 7h 0.74 >More info 0.77 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
44 Fenclorim 4hr 0.79 >More info 0.72 >More info Acetone 4hr root Original data GEO bulk
45 pepr1-1 Pepr2-3 +Pep2 2h -0.77 >More info -0.74 >More info WT +Pep2 2h Pep2 Original data GEO bulk
46 Te ozone 0.84 >More info 0.67 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
47 col-5 DC3000-avrRpm 4h 0.78 >More info 0.73 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
48 Laer Flg22 1h 0.77 >More info 0.73 >More info Laer Control leaf discs Original data GEO bulk
49 WT Bc inoculation 14h 0.85 >More info 0.65 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
50 Laer Flg22+GA 2h 0.78 >More info 0.72 >More info Laer Control leaf discs Original data GEO bulk
51 seedlings protease IV 0.73 >More info 0.77 >More info seedlings nontreated control whole seedling Original data
52 AgNO3 3 h 0.81 >More info 0.69 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
53 Col-Luc WT 3h antimycin A 0.78 >More info 0.72 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
54 CMP 4hr 0.77 >More info 0.72 >More info Acetone 4hr root Original data GEO bulk
55 35S:RPS4 eds1-2 24h -0.77 >More info -0.72 >More info 35S:RPS4 24h leaves Original data
56 Laer Flg22+GA 1h 0.77 >More info 0.72 >More info Laer Control leaf discs Original data GEO bulk
57 rosette Dark Wounded 0.73 >More info 0.75 >More info rosette Dark Control Original data GEO bulk
58 WT 2-4h Xanthomonas 0.71 >More info 0.77 >More info WT T0 Original data GEO bulk
59 AFB1 flg22 2h 0.75 >More info 0.73 >More info WT 0h Leaf tissue Original data GEO bulk
60 miR393 flg22 2h 0.71 >More info 0.77 >More info WT 0h Leaf tissue Original data GEO bulk
61 seedlings-week-old RECA1-overexpressing
transgenic		 0.75 >More info 0.73 >More info seedlings-week-old Col-0 seedlings Original data
62 del1-1 mutant 5d uninfected 0.79 >More info 0.68 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
63 CLO 4mM 0.71 >More info 0.76 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
64 DC3000 7h 0.72 >More info 0.75 >More info Mock 7h DC3000 Original data GEO bulk
65 CT101 ozone 0.83 >More info 0.64 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
66 Pst-DC3000(avrRpm1)-4hpi 0.74 >More info 0.73 >More info Pst-DC3000-4hpi Original data GEO bulk
67 miR393 flg22 1h 0.71 >More info 0.76 >More info WT 0h Leaf tissue Original data GEO bulk
68 WT flg22 1h 0.73 >More info 0.74 >More info WT 0h Leaf tissue Original data GEO bulk
69 efr-1 +elf18 10h -0.75 >More info -0.72 >More info WT +elf18 10h elf18 Original data GEO bulk
70 Flagellin 4 h (leaf) 0.74 >More info 0.73 >More info Mock 4 h (leaf) Original data Elicitor treatments
71 mpk6-ko Flg22 4h 0.71 >More info 0.76 >More info mpk6-ko H2O 4h Original data GEO bulk
72 CMP 24hr 0.76 >More info 0.71 >More info Acetone 24hr root Original data GEO bulk
73 SLWF infested 0.74 >More info 0.73 >More info SLWF uninfested rosette tissue Original data GEO bulk
74 wrky33 Bc inoculation 14h 0.85 >More info 0.61 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
75 ceh1 mutant 0.76 >More info 0.70 >More info Parent line Original data
76 ulp1c ulp1d +Pto 0.73 >More info 0.73 >More info ulp1c ulp1d mock Original data GEO bulk
77 TNT-seedlings 0.71 >More info 0.75 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
78 GST 4 h (leaf) 0.68 >More info 0.78 >More info Mock 4 h (leaf) Original data Elicitor treatments
79 WT 3h -P 0.66 >More info 0.79 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
80 35S:VND7-VP16-GR+CHX 0.64 >More info 0.81 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
81 WT NAA/flg 1h 0.72 >More info 0.73 >More info WT 0h Leaf tissue Original data GEO bulk
82 coi1-16 ein2 sid2 ozone 0.83 >More info 0.61 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
83 Col0-PsmES4326-24hpi 0.83 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
84 AFB1 flg22 1h 0.71 >More info 0.73 >More info WT 0h Leaf tissue Original data GEO bulk
85 Chitosan 3h Treatment 0.77 >More info 0.66 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
86 Seedling KUA1-IOX est 0.72 >More info 0.71 >More info Seedling KUA1-IOX mock Original data
87 rosette Light Wounded 0.70 >More info 0.73 >More info rosette Light Control Original data GEO bulk
88 erf104-ko Flg22 4h 0.70 >More info 0.73 >More info erf104-ko H2O 4h Original data GEO bulk
89 Lipopolysaccaride4 h (leaf) 0.71 >More info 0.72 >More info Mock 4 h (leaf) Original data Elicitor treatments
90 Elevated CO2 fully expanded leaf 0.77 >More info 0.65 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
91 oligomycin 4 h 0.75 >More info 0.67 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
92 msh1 albino 0.77 >More info 0.65 >More info WT aerial part Original data GEO bulk
93 Pto inoculated 0.76 >More info 0.66 >More info col Original data GEO bulk
94 C24 ozone 0.81 >More info 0.61 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
95 WT-NOCO2 INFECTED 0.75 >More info 0.67 >More info WT-MOCK Original data GEO bulk
96 IMI 4mM 0.80 >More info 0.62 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
97 DC3000 24h 0.71 >More info 0.71 >More info Mock 24h DC3000 Original data GEO bulk
98 Leafminer locally damaged thaliana seedlings 0.75 >More info 0.66 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
99 pmr5 pmr6 0.74 >More info 0.67 >More info Col-0 Original data GEO bulk
100 UV 0.76 >More info 0.65 >More info WT aerial region Original data GEO bulk
101 WT powdery mildew 0.75 >More info 0.66 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
102 GO5; 8h switch to ambient CO2 concentrations; 0.74 >More info 0.67 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
103 WT AntimycinA 3h 0.73 >More info 0.68 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
104 Sulfometuron EC50 0.81 >More info 0.60 >More info Carrier Original data GEO bulk
105 AvrRpm1 2 h (leaf) 0.69 >More info 0.72 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
106 DC3000 2 h (leaf) 0.70 >More info 0.71 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
107 S58-2 0.73 >More info 0.67 >More info wt Original data GEO bulk
108 Mutant siz1-3 (Drought) 0.75 >More info 0.65 >More info Col-0 (Drought) Original data GEO bulk
109 siz1-3 drought 0.75 >More info 0.65 >More info Col-0 drought Original data GEO bulk
110 aba3-1 0.67 >More info 0.72 >More info wt Original data GEO bulk
111 cpr5npr1svi1 0.68 >More info 0.71 >More info WT(COL) Original data GEO bulk
112 Laer treat paclobutrazol (PAC) 0.74 >More info 0.65 >More info Laer Control leaf discs Original data GEO bulk
113 S15-118 0.69 >More info 0.70 >More info wt Original data GEO bulk
114 ice1 6H Cold 0.72 >More info 0.66 >More info WT 6H Cold Original data GEO bulk
115 WT+H2O2 0.66 >More info 0.72 >More info WT H2O2 Original data GEO bulk
116 pmr5 0.71 >More info 0.67 >More info Col-0 Original data GEO bulk
117 mkk1/mkk2 24h BTH rep 0.78 >More info 0.60 >More info Col-0 24h BTH rep Original data GEO bulk
118 PAHs stress 0.75 >More info 0.63 >More info exp control phenanthrene whole plants Original data GEO bulk
119 WT +elf18 2h 0.68 >More info 0.69 >More info WT untreated elf18 Original data GEO bulk
120 Primisulfuron EC50 0.77 >More info 0.60 >More info Carrier (primisulfuron) Original data GEO bulk
121 ice1 3H Cold 0.72 >More info 0.65 >More info WT 3H Cold Original data GEO bulk
122 pho1 0.73 >More info 0.64 >More info Col2WT Original data GEO bulk
123 dde2-2 9 hpi A. brassicicola 0.76 >More info 0.61 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
124 Col leaves 48h LT 0.66 >More info 0.71 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
125 safener treated 0.71 >More info 0.66 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
126 Wounding Stress3 h (shoot) 0.68 >More info 0.69 >More info Stress mock 3 h (shoot) Original data Stress treatments
127 bak1-3 +Pep2 10h 0.73 >More info 0.63 >More info WT +Pep2 10h Pep2 Original data GEO bulk
128 col-5 hrpA 2h 0.69 >More info 0.67 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
129 P.p 30hai 0.65 >More info 0.71 >More info At-Control roots Original data GEO bulk
130 shoots bhlh100/101 0uM Fe 0.76 >More info 0.59 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
131 pad4-PsmES4326-24hpi -0.70 >More info -0.65 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
132 35S::PI ap3-3 35S::AP-GR +DEX 0.61 >More info 0.74 >More info 0hr DEX Original data GEO bulk
133 abh1 -ABA 0.62 >More info 0.73 >More info Col-0 -ABA Original data GEO bulk
134 Mutant coi1(leaf) -0.66 >More info -0.69 >More info Col-0 (leaf) Original data GEO bulk
135 mkk1/mkk2 control rep 0.76 >More info 0.59 >More info Col-0 Time 0 rep Original data GEO bulk
136 WT NAA/flg 2h 0.66 >More info 0.68 >More info WT 0h Leaf tissue Original data GEO bulk
137 npr1-1 SA -0.75 >More info -0.59 >More info Col-0 SA complete seedling Original data
138 Laer pretreat GA Flg22 1h 0.63 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
139 Col-0 under 4 days salt 0.77 >More info 0.57 >More info Col-0 under control 4 days salt treatment rosette Original data
140 Dex-rga(delta17) 4h GA4+DEX -0.72 >More info -0.62 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
141 P.p 10.5hai 0.61 >More info 0.73 >More info At-Control roots Original data GEO bulk
142 anac017-1 H2O2 3h -0.71 >More info -0.63 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
143 pnp1-1 3h +P 0.74 >More info 0.60 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
144 gh3.5-1D 48 hpi 0.71 >More info 0.63 >More info Col-0 uninoculated Original data GEO bulk
145 Col-0 flu HL 3h 0.73 >More info 0.61 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
146 Imidazolinone EC50 0.72 >More info 0.61 >More info Carrier (Imidazolinone) Original data GEO bulk
147 P.p 6hai 0.65 >More info 0.68 >More info At-Control roots Original data GEO bulk
148 mil4 BTH 0.72 >More info 0.61 >More info Col BTH rosettes Original data GEO bulk
149 Triazolopyrimidine EC50 0.77 >More info 0.55 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
150 cpr5scv1 0.73 >More info 0.59 >More info WT(COL) Original data GEO bulk
151 pnp1-1 1wk +P 0.73 >More info 0.59 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
152 sid2-1 cold -0.70 >More info -0.62 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
153 pvip1 pvip2 0.69 >More info 0.63 >More info Col-0 whole rosettes Original data GEO bulk
154 Leafminer damaged seedlings 0.75 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
155 toc1-1-49hr 0.65 >More info 0.66 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
156 Mutant siz1-3 0.68 >More info 0.63 >More info Col-0 Original data GEO bulk
157 Cor 24h 0.68 >More info 0.63 >More info Mock 24h Cor Original data GEO bulk
158 siz1-3 control 0.68 >More info 0.63 >More info Col-0 control Original data GEO bulk
159 ERF96OE 0.66 >More info 0.65 >More info WT leaf Original data
160 +1.6 mM Tween 20 1 h. 0.59 >More info 0.72 >More info +distilled water 1 h. Original data GEO bulk
161 cs26 long day 0.68 >More info 0.63 >More info Leaves-WT-LD leaf Original data GEO bulk
162 Mutant gh3.5-1D (AvrRpt2) 0.66 >More info 0.64 >More info Col-0 (AvrRpt2) Original data GEO bulk
163 penta Alternaria 3dpi 0.74 >More info 0.56 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
164 CMV-WT 0.70 >More info 0.60 >More info Mock-At Aerial tissues Original data GEO bulk
165 root Dosed gold 0.69 >More info 0.61 >More info root No gold .125 mM gold 24 h roots Original data
166 0.125 mM gold 24 h 0.69 >More info 0.61 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
167 eds16 whole leaf 5dpi -0.67 >More info -0.62 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
168 smg7b-1 0.71 >More info 0.58 >More info WT whole plant Original data GEO bulk
169 Cycloheximide 3 h 0.63 >More info 0.66 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
170 gun1gun5 far-red pretreated -0.63 >More info -0.66 >More info WT far-red pretreated Original data GEO bulk
171 leaf13 0.65 >More info 0.64 >More info unwounded leaves none Original data GEO bulk
172 8h-DC3000 avrRpm1 0.70 >More info 0.59 >More info 8h-DC3000 leaves Original data GEO bulk
173 sid2 -0.73 >More info -0.55 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
174 petiole in D 0.63 >More info 0.65 >More info petiole in WL petioles Original data GEO bulk
175 edr1 18 h powdery mildew 0.73 >More info 0.55 >More info Col-0 18 h powdery mildew Original data GEO bulk
176 Laer pretreat GA+JA Flg22 0h 0.73 >More info 0.54 >More info Laer pretreat water control leaf discs Original data GEO bulk
177 Dex-rga(delta17) 2h GA4+DEX -0.69 >More info -0.58 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
178 Leaf GLU1-KO 0.67 >More info 0.60 >More info Leaf Col(0) rosette leaves Original data GEO bulk
179 UV Stress 24 h (shoot) 0.64 >More info 0.63 >More info Stress mock 24 h (shoot) Original data Stress treatments
180 Elevated CO2 AMPLE N DAY 0.66 >More info 0.61 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
181 Col-0 low oxygen 0.66 >More info 0.61 >More info Col-0 Original data GEO bulk
182 LTN008-2 aza-dc 0.73 >More info 0.54 >More info LTN012-2 Mock Original data
183 cpr5 0.71 >More info 0.56 >More info WT seedling Original data GEO bulk
184 edr1 36 h powdery mildew 0.67 >More info 0.60 >More info Col-0 36 h powdery mildew Original data GEO bulk
185 R. solani AG8 0.70 >More info 0.57 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
186 ice1 24H Cold 0.67 >More info 0.59 >More info WT 24H Cold Original data GEO bulk
187 atgsnor1-1 -0.67 >More info -0.59 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
188 P.p 2.5hai 0.60 >More info 0.66 >More info At-Control roots Original data GEO bulk
189 Shoot -K 0.71 >More info 0.55 >More info Control-shoot Original data GEO bulk
190 K starvation (shoot) 0.71 >More info 0.55 >More info Ws (shoot) Original data GEO bulk
191 Mature callus 0.67 >More info 0.58 >More info Young callus hypocotyls Original data GEO bulk
192 gai Control 0.73 >More info 0.52 >More info Laer Control leaf discs Original data GEO bulk
193 SA 4mM 0.74 >More info 0.51 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
194 chito-octamer 0.57 >More info 0.67 >More info Col Mock Original data GEO bulk
195 PBZ 0.57 >More info 0.67 >More info none PBZ Rosette Original data GEO bulk
196 pnp1-1 1wk -P 0.69 >More info 0.55 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
197 gpa1 -ABA GC -0.55 >More info -0.69 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
198 Light 3day wt -0.72 >More info -0.52 >More info 0h wt Original data
199 camta1/2/3 warm 0.66 >More info 0.58 >More info WT warm entire aerial part Original data GEO bulk
200 Col-0 INA 48h 0.65 >More info 0.58 >More info Col-0 MOCK 48h Original data GEO bulk
201 Fenclorim 24hr 0.64 >More info 0.59 >More info Acetone 24hr root Original data GEO bulk
202 WT +elf18 10h 0.67 >More info 0.56 >More info WT untreated elf18 Original data GEO bulk
203 gpa1-4/agb1-2 ozone 2d -0.60 >More info -0.63 >More info Col ozone 2d ozone Original data GEO bulk
204 Col ozone 2d 0.63 >More info 0.60 >More info Col clean-air 2d ozone Original data GEO bulk
205 bZIP1ko mutant N+Light- 0.58 >More info 0.65 >More info WT-sib N+Light- whole plant Original data GEO bulk
206 Col-0 C2H4 24h 0.69 >More info 0.54 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
207 aerial organ callus inducing medium 96 h 0.67 >More info 0.56 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
208 mkk2 24h BTH rep 0.66 >More info 0.56 >More info Col-0 24h BTH rep Original data GEO bulk
209 Osmotic Stress 24 h (shoot) 0.70 >More info 0.52 >More info Stress mock 24 h (shoot) Original data Stress treatments
210 del1-1 5dpi 0.65 >More info 0.57 >More info Col-0 5dpi mature fully expanded leaves Original data GEO bulk
211 Glyphosate EC50 0.61 >More info 0.61 >More info Carrier (Glyphosate) Original data GEO bulk
212 WT+chitooctaose 0.51 >More info 0.71 >More info WT+water chitooctaose seedlings Original data GEO bulk
213 mbd6 mutant thaliana 10-day-old seedling 0.66 >More info 0.55 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
214 pepr1-1 Pepr2-3 +Pep2 10h -0.63 >More info -0.58 >More info WT +Pep2 10h Pep2 Original data GEO bulk
215 downy mildew cotyledons late stage 0.65 >More info 0.56 >More info mock inoculated Cotyledons Original data GEO bulk
216 nia1nia2 0.64 >More info 0.57 >More info Col-0 whole seedlings Original data GEO bulk
217 Col whole leaf amplified 5 dpi 0.67 >More info 0.54 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
218 Methyl Jasmonate 1 h 0.59 >More info 0.62 >More info Mock 1 h Original data Basic hormone treatment of seedlings
219 chito-tetramer 0.54 >More info 0.66 >More info Col Mock Original data GEO bulk
220 Col BTH 0.53 >More info 0.67 >More info Col rosettes Original data GEO bulk
221 WT in -N 0.67 >More info 0.53 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
222 Laer pretreat JA Flg22 1h 0.70 >More info 0.50 >More info Laer pretreat water control leaf discs Original data GEO bulk
223 ARR22-ox (t-zeatin 3 h) 0.69 >More info 0.51 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
224 WT 1wk -P 0.68 >More info 0.51 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
225 Dark 3day ivd 0.68 >More info 0.51 >More info 0h ivd Original data
226 cpr5npr1 0.67 >More info 0.51 >More info WT(COL) Original data GEO bulk
227 plant (tga2-5-6) 4h OPDA 0.66 >More info 0.52 >More info plant (tga2-5-6) 4h control Original data GEO bulk
228 vtc1 (II) 0.64 >More info 0.54 >More info Col (II) rosette Original data GEO bulk
229 phr1 phl1 Root-Pi 0.66 >More info 0.52 >More info WT Shoot+Pi roots Original data GEO bulk
230 leaf blade in D 0.53 >More info 0.65 >More info leaf blade in WL leaf blades Original data GEO bulk
231 sta1 0.57 >More info 0.61 >More info WT Original data GEO bulk
232 camta1/3 warm 0.58 >More info 0.60 >More info WT warm entire aerial part Original data GEO bulk
233 A. thaliana-A. lyrata hybrid -0.59 >More info -0.59 >More info A. thaliana mature leaves before flowering Original data GEO bulk
234 rao2 H2O2 3h -0.61 >More info -0.57 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
235 Col-0 Flg22 4h 0.52 >More info 0.65 >More info Col-0 H2O 4h Original data GEO bulk
236 camta1/2/3 24h cold 0.59 >More info 0.58 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
237 RPL18 TuMV inoculated total RNA 0.62 >More info 0.55 >More info mock inoculated total RNA PO Original data GEO bulk
238 lht1 PstDC3000 48h 0.64 >More info 0.53 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
239 ABA DFPM 0.69 >More info 0.48 >More info control Original data GEO bulk
240 Heat shock optimum 0.52 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
241 cat2-2; 8h switch to ambient CO2 concentrations; 0.68 >More info 0.48 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
242 R. solani AG2-1 0.63 >More info 0.53 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
243 tunicamycin -0.61 >More info -0.55 >More info DMF Original data GEO bulk
244 miR393 0h -0.54 >More info -0.62 >More info WT 0h Leaf tissue Original data GEO bulk
245 5-Triiodobenzoic acid3 h 0.64 >More info 0.52 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
246 aerial organ callus inducing medium 48 h 0.68 >More info 0.48 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
247 OH1 0.60 >More info 0.56 >More info Col-0 leaves Original data GEO bulk
248 8hr-pH4.5 0.60 >More info 0.55 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
249 dor drought 0.65 >More info 0.50 >More info WT drought Original data GEO bulk
250 vte2-1 3d vernalization 0.61 >More info 0.54 >More info WT 3d vernalization Original data GEO bulk
251 bio4-1 mutant leaves 0.58 >More info 0.57 >More info WT leaves leaves Original data GEO bulk
252 bHLH122 ox -0.51 >More info -0.64 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
253 col-5 hrpA 4h 0.55 >More info 0.59 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
254 camta2/3 warm 0.61 >More info 0.53 >More info WT warm entire aerial part Original data GEO bulk
255 cpr5 0.62 >More info 0.52 >More info WT(COL) Original data GEO bulk
256 Col whole leaf 5 dpi 0.60 >More info 0.54 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
257 Bur-0-3h IAA 0.63 >More info 0.51 >More info Bur-0h IAA whole plant Original data GEO bulk
258 WT no Pi 0.61 >More info 0.53 >More info WT complete seedlings Original data
259 JA 0.53 >More info 0.60 >More info Col-0 mock Whole seedling Original data GEO bulk
260 DC3000 hrcC 2 h (leaf) 0.51 >More info 0.62 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
261 6h +Pi -0.61 >More info -0.52 >More info 6h -Pi root Original data GEO bulk
262 coi1-PsmES4326-24hpi -0.50 >More info -0.63 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
263 1 h Light IP RNA -0.51 >More info -0.61 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
264 aerial organ callus inducing medium 12 h 0.60 >More info 0.52 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
265 upf1 0.57 >More info 0.55 >More info WT whole plant Original data GEO bulk
266 Laer pretreat GA+JA Flg22 1h 0.68 >More info 0.44 >More info Laer pretreat water control leaf discs Original data GEO bulk
267 Col-0 V. longisporum-inoculated 48 hpi 0.52 >More info 0.60 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
268 plant (tga2-5-6) 4h phytoprostane A1 0.62 >More info 0.50 >More info plant (tga2-5-6) 4h control Original data GEO bulk
269 lht1 untreated 0.52 >More info 0.60 >More info WT untreated untreated leaf Original data GEO bulk
270 csn5 (csn5a-2 csn5b) light 0.65 >More info 0.47 >More info WT light Original data GEO bulk
271 Laer pretreat JA Flg22 2h 0.72 >More info 0.40 >More info Laer pretreat water control leaf discs Original data GEO bulk
272 Laer pretreat GA Flg22 0h 0.69 >More info 0.42 >More info Laer pretreat water control leaf discs Original data GEO bulk
273 rpoTmp(line) MLD stressed 0.58 >More info 0.53 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
274 sni1 0.58 >More info 0.53 >More info WT Original data GEO bulk
275 WT roots - Fe 0.63 >More info 0.48 >More info WT roots + Fe Roots Original data GEO bulk
276 WT chitooctaose 0.47 >More info 0.64 >More info WT water Original data GEO bulk
277 short 10-degree- 0.55 >More info 0.55 >More info control short Original data GEO bulk
278 WT seedlings MV 0.61 >More info 0.49 >More info WT seedlings control Seedlings Original data GEO bulk
279 plant (Col-0) 4h OPDA 0.65 >More info 0.45 >More info plant (Col-0) 4h control Original data GEO bulk
280 OPDA 4 h 0.65 >More info 0.45 >More info Col-0 Original data GEO bulk
281 Col whole leaf 3dpi 0.46 >More info 0.64 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
282 current injection 0.46 >More info 0.64 >More info no current injection 4 microampere of electric current for 1 second Original data GEO bulk
283 Mutant cry1 (High Light) -0.54 >More info -0.55 >More info Col-0 (High Light) Original data GEO bulk
284 ein5-1 ski2-3 0.56 >More info 0.53 >More info Col-0 aerial tissue Original data
285 scrm-D 0.64 >More info 0.45 >More info Col-0 WT whole seedling Original data GEO bulk
286 cry1 high light -0.54 >More info -0.55 >More info Col-O high light Original data GEO bulk
287 protoplasts T2 [flg22] 0.45 >More info 0.64 >More info protoplasts T2 [CPK] mesophyll protoplasts Original data GEO bulk
288 coi1-2 0.52 >More info 0.57 >More info Col-0 mock Whole seedling Original data GEO bulk
289 upf3 0.59 >More info 0.50 >More info WT whole plant Original data GEO bulk
290 Norflurazon 0.49 >More info 0.60 >More info Col-0 Original data GEO bulk
291 inhibitor A Treated 0.49 >More info 0.60 >More info Negative Control Original data GEO bulk
292 Norflurazon 0.49 >More info 0.60 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
293 short 8-degree- 0.57 >More info 0.51 >More info control short Original data GEO bulk
294 WT H2O2 3h 0.53 >More info 0.55 >More info WT water 3h 3h_H2O2 Original data GEO bulk
295 vtc2 (I) 0.59 >More info 0.49 >More info Col (I) rosette Original data GEO bulk
296 aerial organ callus inducing medium 24h 0.62 >More info 0.46 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
297 Laer pretreat GA+JA Flg22 2h 0.64 >More info 0.44 >More info Laer pretreat water control leaf discs Original data GEO bulk
298 GSH 0.54 >More info 0.54 >More info control GSH treated seedlings Original data GEO bulk
299 Methyl Jasmonate 3 h 0.55 >More info 0.52 >More info Mock 3 h Original data Basic hormone treatment of seedlings
300 CMV-A2b mutant 0.52 >More info 0.55 >More info Mock-At Aerial tissues Original data GEO bulk
301 9 hr Hypoxia 1 hr recovery IP RNA 0.55 >More info 0.52 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
302 col-5 DC3000 4h 0.41 >More info 0.66 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
303 atgsnor1-3-avrB-6h 0.57 >More info 0.50 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
304 RRE2 Chitin 0.58 >More info 0.48 >More info Chitin Original data GEO bulk
305 camta3-2 0.58 >More info 0.48 >More info WT Original data GEO bulk
306 rcf1-1 cold 24h 0.57 >More info 0.49 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
307 Cold Stress 24 h (shoot) 0.58 >More info 0.48 >More info Stress mock 24 h (shoot) Original data Stress treatments
308 WT +Pep2 2h 0.71 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
309 rcf1-1 cold 12h 0.54 >More info 0.52 >More info WT cold 12 h cold at 4°C seedlings Original data GEO bulk
310 vte2 leaves 48h LT 0.64 >More info 0.42 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
311 WT 90-105 min Xanthomonas 0.39 >More info 0.67 >More info WT T0 Original data GEO bulk
312 wavy 0.51 >More info 0.54 >More info WT Original data GEO bulk
313 Atss3 Light4 -0.59 >More info -0.46 >More info Atss3 Dark0.5 Original data GEO bulk
314 rosettes WT drought 0.60 >More info 0.45 >More info rosettes WT watered Original data GEO bulk
315 arf2 brz -0.51 >More info -0.54 >More info arf2 mock Original data GEO bulk
316 Col-0 DCA 48h 0.45 >More info 0.60 >More info Col-0 MOCK 48h Original data GEO bulk
317 M6PR transgenic leaf 100mM NaCl -0.38 >More info -0.67 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
318 NJ15 0.33 >More info 0.72 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
319 Differentiation 12h 0.57 >More info 0.48 >More info Differentiation 0h leaves Original data
320 toc1-1-65hr 0.61 >More info 0.43 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
321 ein2-PsmES4326-24hpi -0.55 >More info -0.49 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
322 leaf rlt1-1rlt2-1 -0.51 >More info -0.53 >More info leaf Col-0 leaf Original data GEO bulk
323 Nicotinamide-53hr 0.62 >More info 0.42 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
324 tt4 0.52 >More info 0.52 >More info Col-0 aerial part Original data
325 seedlings by volatiles from leafminer damaged
Lima bean 48h		 0.51 >More info 0.53 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
326 Leafminer systemically damaged thaliana seedlings 0.50 >More info 0.54 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
327 Col-0 drought 0.61 >More info 0.43 >More info Col-0 control Original data GEO bulk
328 Selenate (root) 0.47 >More info 0.57 >More info Ws (root) Original data GEO bulk
329 Col laser microdissected 5 dpi 0.47 >More info 0.57 >More info Col laser microdissected 5d UI LMD leaf epidermal and mesophyll cells Original data GEO bulk
330 Root Selenate 0.47 >More info 0.57 >More info Root control 40 micromolar selenate Root Original data GEO bulk
331 arf2 mock 0.50 >More info 0.53 >More info Col mock Original data GEO bulk
332 WT cold 0.61 >More info 0.42 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
333 fls1-3 0.52 >More info 0.51 >More info Col-0 Rosette leaves Original data
334 cdpk6-yfp 0.57 >More info 0.46 >More info Kan seedlings Original data GEO bulk
335 Mutant arf2 (etiol) 0.50 >More info 0.53 >More info Col (etiol) Original data GEO bulk
336 WT 30μM arsenate 8 hours. 0.57 >More info 0.46 >More info WT control (not supplemented). Original data
337 wt systemic wounding 0.52 >More info 0.51 >More info wt control leaves Original data GEO bulk
338 Mutant ein2(leaf) -0.45 >More info -0.58 >More info Col-0 (leaf) Original data GEO bulk
339 35S:RPS4 eds1-2 2h -0.38 >More info -0.65 >More info 35S:RPS4 2h leaves Original data
340 short 12-degree- 0.52 >More info 0.50 >More info control short Original data GEO bulk
341 apk1 apk2 0.61 >More info 0.41 >More info Col0-control whole rosette Original data GEO bulk
342 nia1nia2noa1-2 0.56 >More info 0.46 >More info Col-0 whole seedlings Original data GEO bulk
343 ASL9-ox -0.57 >More info -0.45 >More info WT aerial parts of seedlings Original data GEO bulk
344 abi4 vtc2 (I) 0.55 >More info 0.47 >More info Col (I) rosette Original data GEO bulk
345 Phytoprostane A1 4 h 0.57 >More info 0.44 >More info Col-0 Original data GEO bulk
346 mbd4 mutant thaliana 10-day-old seedling 0.55 >More info 0.46 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
347 WT resupplied Pi 4h 0.53 >More info 0.48 >More info WT complete seedlings Original data
348 aox1a(line) MLD stressed 0.56 >More info 0.45 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
349 MIL4 ox BTH 0.60 >More info 0.41 >More info Col BTH Original data GEO bulk
350 Col-0 norflurazon 0.49 >More info 0.52 >More info Col-0 control Original data GEO bulk
351 atgsnor1-1-avrB-6h 0.43 >More info 0.58 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
352 HARAP hypoxic 0.48 >More info 0.53 >More info hypoxic hypoxia Original data GEO bulk
353 root protoplasts 40 mM NaCl 0.47 >More info 0.54 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
354 ani1 T0.5 -0.48 >More info -0.53 >More info WT T0.5 root tissue Original data GEO bulk
355 IRP1-OE-Ctrl--root 0.44 >More info 0.57 >More info COL-0-Ctrl--root root Original data
356 Rsch 1d 0.47 >More info 0.54 >More info Rsch CA Leaves Original data
357 Time-0 chr11-1chr17-1 -0.57 >More info -0.43 >More info Time-0 Col-0 leaf explants Original data
358 SCR-GR Time 1H Dex 0.59 >More info 0.41 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
359 35S-MIF1 dark grown 0.54 >More info 0.46 >More info Dark-grown WT control Original data GEO bulk
360 Col-0 SA 0.61 >More info 0.39 >More info Col-0 Original data GEO bulk
361 C24-3h IAA 0.59 >More info 0.41 >More info C24-0h IAA whole plant Original data GEO bulk
362 Cocultivation 8 hrs root 0.54 >More info 0.46 >More info Mock cocultivation 8 hrs root Root Original data
363 ced1 -0.53 >More info -0.47 >More info WT PEG 6hr seedlings Original data GEO bulk
364 Bur-0-1h IAA 0.56 >More info 0.44 >More info Bur-0h IAA whole plant Original data GEO bulk
365 IAA/inhibitor A Treated 0.40 >More info 0.60 >More info IAA Treated Original data GEO bulk
366 Laer Alternaria 3dpi -0.46 >More info -0.54 >More info Laer Control leaf discs Original data GEO bulk
367 (Col-0)+100 uM As 0.47 >More info 0.53 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
368 rosette leaves fdh 0.52 >More info 0.47 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
369 WT Seedling BL -0.53 >More info -0.46 >More info WT Seedling Dark Original data GEO bulk
370 sng1 UV 0.51 >More info 0.48 >More info UV aerial region Original data GEO bulk
371 gpa1 -ABA LF 0.51 >More info 0.48 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
372 IRP1-OE-Fe--shoot 0.55 >More info 0.44 >More info COL-0-Fe--shoot shoot Original data
373 myb3 myb3r4d 0.55 >More info 0.44 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
374 WT 1mM phosphate 8 hours. -0.58 >More info -0.41 >More info WT control (not supplemented). Original data
375 gpa1 +ABA GC -0.50 >More info -0.49 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
376 Rsch 8h 0.41 >More info 0.58 >More info Rsch CA Leaves Original data
377 RPL18 TuMV inoculated polysomal RNA 0.56 >More info 0.42 >More info mock inoculated polysomal RNA PO Original data GEO bulk
378 penta Pst DC3000 12hpi 0.62 >More info 0.36 >More info Laer Pst DC3000 12hpi leaf discs Original data GEO bulk
379 GST-overexpression seedlings control 0.69 >More info 0.29 >More info WT seedlings control Seedlings Original data
380 clf-28 swn-7 0.48 >More info 0.50 >More info Col whole plant Original data GEO bulk
381 npr1 sni1 brca2a SA -0.48 >More info -0.50 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
382 ckh1 CK200 0.46 >More info 0.52 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
383 Transgenic LEC2GR Seedling 1h Dex 0.45 >More info 0.53 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
384 OE WRKY63.3 high light 0.43 >More info 0.55 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
385 Col 3d 0.43 >More info 0.55 >More info Col CA Leaves Original data
386 20d after anthesis 0.58 >More info 0.39 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
387 smg5-2 0.56 >More info 0.41 >More info WT whole plant Original data GEO bulk
388 Col-0 48 hpi 0.58 >More info 0.39 >More info Col-0 uninoculated Original data GEO bulk
389 WT light -0.55 >More info -0.42 >More info WT dark Original data GEO bulk
390 toc1-1-53hr 0.66 >More info 0.31 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
391 12h-DC3000 avrRpm1 0.31 >More info 0.66 >More info 12h-DC3000 leaves Original data GEO bulk
392 Dex-rga(delta17) 4h GA4 -0.40 >More info -0.57 >More info Vector 4h GA4 shoots Original data GEO bulk
393 AsAKiin11 T2 0.47 >More info 0.50 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
394 ataf1-1 mutant Col-0 Un-inoculated -0.63 >More info -0.33 >More info WT Col-0 Un-inoculated Original data GEO bulk
395 35:SUB1A 0.62 >More info 0.34 >More info WT whole seedling Original data GEO bulk
396 seedling 1.5h after Gamma atm-1 0.52 >More info 0.44 >More info seedling day 1 unirradiated atm-1 1.5h Original data
397 Full AC2 T2 0.59 >More info 0.37 >More info AC2 and AC2del control T2 two days post infusion with Agrobacterium containing full-length CaLCuV AC2 Arabidopsis rosette leaves Original data
398 oas-a1.1 shoot -0.44 >More info -0.52 >More info WT-Untreated Shoot Original data GEO bulk
399 oas-a1.1 Cd 18h 0.45 >More info 0.51 >More info Cd 18h root Root Original data GEO bulk
400 1 h Light Total RNA -0.42 >More info -0.54 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
401 opr3 JA 2 h 0.31 >More info 0.65 >More info opr3 0 h Original data GEO bulk
402 NAA -AA 0.55 >More info 0.40 >More info B5 -AA B5 media supplemented with 4.5 µM NAA and untreated Original data
403 9 hr Hypoxia IP RNA 0.51 >More info 0.44 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
404 ws 24h4c q8ws 0.57 >More info 0.38 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
405 Col-0-3h IAA 0.60 >More info 0.35 >More info Col-0-0h IAA whole plant Original data GEO bulk
406 Nicotinamide-57hr 0.54 >More info 0.41 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
407 long 14-degree- 0.45 >More info 0.50 >More info control long Original data GEO bulk
408 15m.KCl 0.38 >More info 0.57 >More info To. KCl 14 day old Roots Original data GEO bulk
409 Truncated AC2 T2 -0.66 >More info -0.28 >More info AC2 and AC2del control T2 two days post infusion with Agrobacterium containing a truncated version of CaLCuV AC2 Arabidopsis rosette leaves Original data
410 auxin and brassinazole seedlings 0.55 >More info 0.39 >More info auxin seedlings Original data GEO bulk
411 camta3-1 0.50 >More info 0.44 >More info WT Original data GEO bulk
412 Col leaf scrape 5 dpi 0.58 >More info 0.36 >More info Col whole leaf 5d UI leaf section scrapes Original data GEO bulk
413 abi4-102 (II) 0.51 >More info 0.43 >More info Col (II) rosette Original data GEO bulk
414 Salt Stress 24 h (root) 0.51 >More info 0.43 >More info Stress mock 24 h (root) Original data Stress treatments
415 Methyl Jasmonate 0.5 h 0.30 >More info 0.64 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
416 aba1 hypocotyl 0.33 >More info 0.61 >More info Ler hypocotyl hypocotyl Original data GEO bulk
417 S14-150 0.53 >More info 0.40 >More info wt Original data GEO bulk
418 Nicotinamide-69hr 0.55 >More info 0.38 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
419 Salt Stress 24 h (shoot) 0.52 >More info 0.41 >More info Stress mock 24 h (shoot) Original data Stress treatments
420 albino Ds13-2198-1 -0.57 >More info -0.36 >More info control Original data GEO bulk
421 35S:RPS4 rrs1-11 8h -0.51 >More info -0.42 >More info 35S:RPS4 8h leaves Original data
422 pmr4-1 control 0.52 >More info 0.41 >More info WT control uninoculated Original data GEO bulk
423 Whole root - low pH 12H 0.41 >More info 0.52 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
424 AsAKiin11 T1 0.30 >More info 0.63 >More info C2 C2del and (As)AKiin11 control T1 one day post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
425 Compost 0.54 >More info 0.38 >More info Perlite Compost Original data GEO bulk
426 seedling -S Exp 0.52 >More info 0.40 >More info seedling FN Exp seedling Original data
427 irradiated leaf (WT 1d) 0.61 >More info 0.31 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
428 irradiated leaf (cmt 1d) 0.58 >More info 0.34 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
429 SCR-GR Time 12H Dex 0.61 >More info 0.31 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
430 long 17-degree- 0.31 >More info 0.61 >More info control long Original data GEO bulk
431 Nicotinamide-93hr 0.53 >More info 0.38 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
432 Mutant arf2-6 -0.54 >More info -0.37 >More info Col Original data GEO bulk
433 Nicotinamide-89hr 0.51 >More info 0.40 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
434 agb1 gpa1 +ABA GC -0.38 >More info -0.53 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
435 Nicotinamide-81hr 0.57 >More info 0.34 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
436 Ws 100mM NaCl 0.50 >More info 0.41 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
437 Ws leaf 100mM NaCl 0.50 >More info 0.41 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
438 npr1-PsmES4326-24hpi -0.50 >More info -0.41 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
439 csn3-1 light 0.51 >More info 0.39 >More info WT light Original data GEO bulk
440 apum23 0.53 >More info 0.37 >More info WT (Col-3) aerial parts Original data GEO bulk
441 Heat shock 20%Inhibition 0.51 >More info 0.39 >More info Heat shock baseline Photosynthesis at 20% inhibition from optimum leaf first fully expanded Original data GEO bulk
442 Nicotinamide-65hr 0.54 >More info 0.36 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
443 leaf blade in FRD 0.39 >More info 0.51 >More info leaf blade in WL leaf blades Original data GEO bulk
444 9m.KCl 0.35 >More info 0.55 >More info To. KCl 14 day old Roots Original data GEO bulk
445 Light 0.38 >More info 0.52 >More info Control Original data GEO bulk
446 sid2-1 warm -0.32 >More info -0.58 >More info WT warm entire aerial part Original data GEO bulk
447 atmospheric CO2 high Mg shoot 0.55 >More info 0.34 >More info atmospheric CO2 normal Mg shoot Shoot Original data
448 WT mitomycin C 0.55 >More info 0.34 >More info WT mock shoot apical meristem Original data
449 atmospheric CO2 low Mg shoot 0.56 >More info 0.33 >More info atmospheric CO2 normal Mg shoot Shoot Original data
450 2d dark-grown pif1pif3pif4pif5 (pifq) mutant/1 hr
red light 		-0.50 >More info -0.39 >More info 2d dark-grown WT(Col-0)/1 hr red light Original data GEO bulk
451 toc1-1-57hr 0.50 >More info 0.39 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
452 Atss3 Dark8 -0.39 >More info -0.50 >More info Atss3 Dark0.5 Original data GEO bulk
453 abi1 hypocotyl 0.29 >More info 0.60 >More info Ler hypocotyl hypocotyl Original data GEO bulk
454 SA 0.55 >More info 0.33 >More info WT mock Whole seedling Original data GEO bulk
455 D2O 0.55 >More info 0.33 >More info H2O seedling Original data GEO bulk
456 Polysomal RNA 35S:AtCSP1-FH1 0.32 >More info 0.56 >More info Polysomal RNA csp1 12h non-stress rosettes Original data GEO bulk
457 6-trichlorophenoxyacetic acid 3 h 0.36 >More info 0.52 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
458 FarRed Light 45min -0.18 >More info -0.70 >More info White Light 45min Original data Light treatments
459 agb1 gpa1 -ABA GC -0.31 >More info -0.57 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
460 root protophloem 40 mM NaCl 0.50 >More info 0.37 >More info root protophloem Original data GEO bulk
461 scrm-D:mute 0.52 >More info 0.35 >More info Col-0 WT whole seedling Original data GEO bulk
462 rosettes myoox drought 0.54 >More info 0.32 >More info rosettes myoox watered Original data GEO bulk
463 penta Control 0.55 >More info 0.31 >More info Laer Control leaf discs Original data GEO bulk
464 Nicotinamide-73hr 0.53 >More info 0.33 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
465 anac017-2 H2O2 3h -0.60 >More info -0.26 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
466 35S::HRE2 Hypoxic -0.36 >More info -0.50 >More info Col-0 wt Hypoxic hypoxic treatment Original data GEO bulk
467 AtLysM RLK1 mutant chitooctaose -0.35 >More info -0.51 >More info WT chitooctaose Original data GEO bulk
468 WT-Dry 0.27 >More info 0.59 >More info WT-CK dehydration treatment 1h Original data
469 expressing C2 MeJA -0.57 >More info -0.29 >More info LUC2T Original data GEO bulk
470 WT Shoot-Pi 0.55 >More info 0.30 >More info WT Shoot+Pi shoots Original data GEO bulk
471 MPK6 ox Shoot Hypoxia 0.54 >More info 0.31 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
472 E.orontii Infection 3 day 0.33 >More info 0.52 >More info Uninfection 3 day Original data Elicitor treatments
473 long 12-degree- 0.31 >More info 0.54 >More info control long Original data GEO bulk
474 Col in Pi deficiency medium 0.30 >More info 0.55 >More info Col in control medium root Original data GEO bulk
475 CeO2 germinant -0.31 >More info -0.54 >More info Millipore Water germinant CeO2 seedling Original data
476 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.64 >More info -0.21 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
477 Rose Bengal 0.5 uM 0.21 >More info 0.64 >More info Control RB and PER Rose Bengal Original data
478 total mRNA eif3k 0.52 >More info 0.32 >More info total mRNA WT aerial part Original data GEO bulk
479 Dark 6h ivd 0.56 >More info 0.28 >More info 0h ivd Original data
480 Red/FR Light45min 0.03 >More info 0.81 >More info FarRed Light 45min Original data Light treatments
481 1h +Pi -0.33 >More info -0.51 >More info 1h -Pi root Original data GEO bulk
482 Laer Flg22(Agrobacterium) 2h -0.21 >More info -0.63 >More info Laer Control leaf discs Original data GEO bulk
483 Nicotinamide-49hr 0.51 >More info 0.32 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
484 sps1 -0.53 >More info -0.30 >More info WT seedling Original data GEO bulk
485 siliques AtHb1 control 0.31 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
486 oligomycin 1 h 0.30 >More info 0.53 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
487 Atwrky63 -0.51 >More info -0.31 >More info Col0 none leaf Original data GEO bulk
488 treated group 0.55 >More info 0.27 >More info Control group Original data
489 seedlings +5AC 0.53 >More info 0.29 >More info control seedlings 10-day old whole seedling Original data GEO bulk
490 RGA-GR-DEX 0.26 >More info 0.56 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
491 cat2-long-day 2d -0.50 >More info -0.31 >More info Col0-LD2 transferred to air (400 ppm) for 2 days in long day regime (16h light/8h dark) rosette leaf material Original data GEO bulk
492 shoots WT 0uM Fe 0.55 >More info 0.26 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
493 GRX-overexpression seedlings control 0.56 >More info 0.25 >More info WT seedlings control Seedlings Original data GEO bulk
494 BLM+INA 0.50 >More info 0.31 >More info CK BLM and INA seedling Original data
495 Col-0 24hpi A. brassicicola 0.79 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
496 IAA7mII over-expressor IAA Treated 0.12 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
497 JA 3h 0.22 >More info 0.59 >More info EtOH 3h 3hr Original data GEO bulk
498 tor mutant 0.54 >More info 0.26 >More info WT (Col) none seedlings Original data GEO bulk
499 low CO2 + light 0.51 >More info 0.29 >More info normal CO2 + light Original data GEO bulk
500 penta MeJA 1h 0.53 >More info 0.27 >More info Laer MeJA 1h leaf discs Original data GEO bulk
501 Protoplast Induced 0.19 >More info 0.61 >More info Uninduced Original data GEO bulk
502 HARAP aerobic -0.24 >More info -0.56 >More info WT aerobic aerobic Original data GEO bulk
503 G3P 0.58 >More info 0.22 >More info Mock distal leaves Original data GEO bulk
504 FLIGHT TAGESB plate6 ROOTS 0.21 >More info 0.59 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
505 spx1 spx2 complete 0.50 >More info 0.29 >More info WT complete seedlings Original data
506 Lip0 UV 0.66 >More info 0.13 >More info Lip0 mock UV seedling Original data
507 low water potential 0.54 >More info 0.25 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
508 Ambient CO2 expanding leaf -0.52 >More info -0.27 >More info Control for tissue data expanding leaf Original data
509 shoots bhlh100/101 100uM Fe 0.29 >More info 0.50 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
510 atmyc2 Seedling BL -0.16 >More info -0.63 >More info WT Seedling BL Original data GEO bulk
511 21h-DC3000 avrRpm1 -0.60 >More info -0.18 >More info 21h-DC3000 leaves Original data GEO bulk
512 light -0.59 >More info -0.18 >More info dark light seedling Original data GEO bulk
513 Col-0 RNAi-MBS2/mbs1-1 HL 0h 0.50 >More info 0.27 >More info Col-0 WT HL 0h without high light treatment whole seedlings without root Original data
514 bak1-3 +Pep2 2h 0.26 >More info 0.51 >More info WT +Pep2 2h Pep2 Original data GEO bulk
515 HairpinZ 4 h (leaf) 0.79 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
516 Mock pft1 leaf 0.08 >More info 0.68 >More info Mock Col-0 leaf water leaf Original data GEO bulk
517 0h hml 0.64 >More info 0.11 >More info 0h wt Original data
518 WT cotyledons -0.51 >More info -0.24 >More info Control for tissue data cotyledons Original data
519 gtl1 0.54 >More info 0.21 >More info WT trichome Original data GEO bulk
520 gtl1-1 0.54 >More info 0.21 >More info WT trichome Original data GEO bulk
521 Nicotinamide-61hr 0.50 >More info 0.24 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
522 toc1-1-77hr 0.68 >More info 0.06 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
523 sfr3 cold 0.56 >More info 0.18 >More info WT-cold aerial tissues Original data GEO bulk
524 SA Treated 0.66 >More info 0.08 >More info Water Original data GEO bulk
525 35:SUB1C 0.50 >More info 0.23 >More info WT whole seedling Original data GEO bulk
526 cat2-hCO2 -0.62 >More info -0.11 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
527 WT zebularine 5d -0.51 >More info -0.20 >More info WT mock 5d shoot apical meristem Original data
528 Ba1 UV 0.51 >More info 0.20 >More info Ba1 mock UV seedling Original data
529 Infected pft1 leaf 0.16 >More info 0.54 >More info Infected Col-0 leaf F. oxysporum leaf Original data GEO bulk
530 flu dark 8hours/30 minute light 0.10 >More info 0.60 >More info col dark 8hours/30 minute light Original data GEO bulk
531 IAA/inhibitor B Treated 0.18 >More info 0.52 >More info IAA Treated Original data GEO bulk
532 P. infestans 6 h (leaf) 0.84 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
533 pXVE:HA-EDM2-a untreated -0.18 >More info -0.51 >More info Col-0 untreated seedlings Original data GEO bulk
534 Col PSTDC3000 24h 0.81 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
535 12h-DC3000 hrpA -0.53 >More info -0.15 >More info 12h-DC3000 leaves Original data GEO bulk
536 DUO1 induced 6h -0.50 >More info -0.17 >More info 6hr-not-induced whole plant Original data GEO bulk
537 vte2 leaves 120h LT 0.63 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
538 C24 UV1 -0.55 >More info -0.11 >More info C24 mock UV seedling Original data
539 cov1 cov2 stem Base 0.50 >More info 0.15 >More info WT stem Base stem Base Original data GEO bulk
540 wnk8-1 untreated -0.14 >More info -0.51 >More info Col-0 untreated seedlings Original data GEO bulk
541 bZIP1ko mutant N+Light+ 0.59 >More info 0.06 >More info WT-sib N+Light+ whole plant Original data GEO bulk
542 rao1-2 0.56 >More info 0.08 >More info Col-Luc WT mock water control treatment 3 hours whole green tissue Original data GEO bulk
543 agb1 -ABA GC -0.04 >More info -0.60 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
544 12h volatiles Sm. R3089 -0.10 >More info -0.54 >More info 12h untreated whole seedling Original data GEO bulk
545 opr3 JA 0.5 h -0.06 >More info 0.69 >More info opr3 0 h Original data GEO bulk
546 35S:RPS4 rrs1-11 2h 0.54 >More info 0.08 >More info 35S:RPS4 2h leaves Original data
547 Light 3day hml -0.66 >More info 0.04 >More info 0h hml Original data
548 Mh0 UV -0.67 >More info 0.06 >More info Mh0 mock UV seedling Original data
549 AtMYB30-ox 90-105 min Xanthomonas 0.54 >More info 0.06 >More info WT 90-105 min Xanthomonas Original data GEO bulk
550 t-zeatin 0.5 h -0.03 >More info -0.57 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
551 AtMYB30-ox 2-4h Xanthomonas 0.65 >More info -0.06 >More info WT 2-4h Xanthomonas Original data GEO bulk
552 0.5h pollen tube 0.06 >More info 0.51 >More info drypollen in vitro-grown pollen tubes Original data GEO bulk
553 4C 1h 0.03 >More info 0.54 >More info 4C 0h Original data GEO bulk
554 GO5; 0h switch to ambient CO2 concentrations; -0.58 >More info 0.01 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
555 pvip1 pvip2 seedling 0.59 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
556 Shoot -P -0.51 >More info -0.04 >More info Shoot Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
557 seed germinating in countinuous light 24h SL -0.13 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
558 Leaf wounded 0.02 >More info 0.51 >More info Leaf control vegetative leaf Original data GEO bulk
559 harboring empty vector+CHX -0.50 >More info -0.02 >More info harboring empty vector+DEX +CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
560 glk1 glk2 GLK1-GR +DEX 4h 0.05 >More info -0.57 >More info glk1 glk2 GLK1-GR mock 4h dexamethasone whole seedlings Original data GEO bulk
561 Shoot submergence 7h 0.50 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
562 CCA1-ox 6am non-polysomal -0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
563 Cs shoot 0.03 >More info -0.50 >More info control shoot Original data GEO bulk
564 coi1 0.17 >More info -0.56 >More info Col-0 Leaves Original data GEO bulk
565 Shoot apex inflorescence (after bolting) -0.28 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
566 bri1-116 -0.39 >More info 0.73 >More info Col seedling Original data GEO bulk