4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on root protophloem 40 mM NaCl
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List of experiments correlated with "root protophloem 40 mM NaCl"  Help Download transcriptome of top 30
Score Experiment Correlation from
root protophloem 40 mM NaCl		 Correlation to
root protophloem 40 mM NaCl		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 root protophloem 40 mM NaCl 1.00 >More info 1.00 >More info root protophloem Original data GEO bulk
2 root columella root cap 40 mM NaCl 0.78 >More info 0.74 >More info root columella root cap Original data GEO bulk
3 root stele 40 mM NaCls 0.73 >More info 0.76 >More info root stele Original data GEO bulk
4 root endodermis and quiescent center 40 mM NaCl 0.60 >More info 0.75 >More info root endodermis and quiescent center Original data GEO bulk
5 whole roots 140 mM NaCl 1 hour 0.54 >More info 0.62 >More info whole roots standard Original data GEO bulk
6 Hydrogen Peroxide 500 uM 0.46 >More info 0.68 >More info Control RB and PER Hydrogen Peroxide Original data
7 whole roots 140 mM NaCl 4 hour 0.49 >More info 0.64 >More info whole roots standard Original data GEO bulk
8 NaCl Col 0.51 >More info 0.61 >More info Col Original data GEO bulk
9 HSP90 Reduced RNAi-B1 0.52 >More info 0.60 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
10 Col-0 under 4 days salt 0.63 >More info 0.48 >More info Col-0 under control 4 days salt treatment rosette Original data
11 cat2-2; 8h switch to ambient CO2 concentrations; 0.50 >More info 0.61 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
12 Salt Stress 24 h (root) 0.58 >More info 0.53 >More info Stress mock 24 h (root) Original data Stress treatments
13 flu over-tAPX 0.48 >More info 0.63 >More info WT Col Original data GEO bulk
14 flu 0.50 >More info 0.60 >More info WT Col Original data GEO bulk
15 rosette Dark Wounded 0.39 >More info 0.71 >More info rosette Dark Control Original data GEO bulk
16 HSP90 Reduced RNAi-A2 0.49 >More info 0.61 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
17 WT seedlings MV 0.45 >More info 0.64 >More info WT seedlings control Seedlings Original data GEO bulk
18 chito-tetramer 0.57 >More info 0.52 >More info Col Mock Original data GEO bulk
19 Col-0 flu HL 3h 0.58 >More info 0.51 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
20 Col0-PsmES4326-24hpi 0.48 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
21 6h +Pi -0.56 >More info -0.52 >More info 6h -Pi root Original data GEO bulk
22 rosette Light Wounded 0.46 >More info 0.62 >More info rosette Light Control Original data GEO bulk
23 plant (tga2-5-6) 4h phytoprostane A1 0.53 >More info 0.52 >More info plant (tga2-5-6) 4h control Original data GEO bulk
24 SCR-GR Time 1H Dex 0.42 >More info 0.63 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
25 Leafminer damaged seedlings 0.49 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
26 bak1-3 +Pep2 10h 0.57 >More info 0.46 >More info WT +Pep2 10h Pep2 Original data GEO bulk
27 root Dosed gold 0.56 >More info 0.47 >More info root No gold .125 mM gold 24 h roots Original data
28 0.125 mM gold 24 h 0.56 >More info 0.47 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
29 WT AntimycinA 3h 0.55 >More info 0.47 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
30 inhibitor A Treated 0.47 >More info 0.55 >More info Negative Control Original data GEO bulk
31 anac017-2 AntimycinA 3h -0.53 >More info -0.48 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
32 root protoplasts 40 mM NaCl 0.45 >More info 0.56 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
33 Fenclorim 4hr 0.54 >More info 0.46 >More info Acetone 4hr root Original data GEO bulk
34 rosette leaves fdh 0.49 >More info 0.51 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
35 WT 30μM arsenate 8 hours. 0.52 >More info 0.47 >More info WT control (not supplemented). Original data
36 ABA DFPM 0.56 >More info 0.43 >More info control Original data GEO bulk
37 pepr1-1 Pepr2-3 +Pep2 2h -0.54 >More info -0.44 >More info WT +Pep2 2h Pep2 Original data GEO bulk
38 Cocultivation 8 hrs root 0.55 >More info 0.43 >More info Mock cocultivation 8 hrs root Root Original data
39 ced1 -0.50 >More info -0.48 >More info WT PEG 6hr seedlings Original data GEO bulk
40 root epidermis and lateral root cap 40 mM NaCl 0.51 >More info 0.47 >More info root epidermis and lateral root cap Original data GEO bulk
41 rosette leaves lcr 0.46 >More info 0.52 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
42 rosettes WT drought 0.50 >More info 0.47 >More info rosettes WT watered Original data GEO bulk
43 Mutant gh3.5-1D (AvrRpt2) 0.53 >More info 0.43 >More info Col-0 (AvrRpt2) Original data GEO bulk
44 whole roots 140 mM NaCl 30 minutes 0.42 >More info 0.54 >More info whole roots standard Original data GEO bulk
45 gpa1 -ABA GC -0.40 >More info -0.55 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
46 gai Control 0.50 >More info 0.45 >More info Laer Control leaf discs Original data GEO bulk
47 AgNO3 3 h 0.50 >More info 0.44 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
48 SCR-GR Time 12H Dex 0.51 >More info 0.42 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
49 CMP 4hr 0.52 >More info 0.41 >More info Acetone 4hr root Original data GEO bulk
50 col-5 DC3000 12h 0.52 >More info 0.41 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
51 CMP 24hr 0.54 >More info 0.38 >More info Acetone 24hr root Original data GEO bulk
52 ulp1c ulp1d +Pto 0.50 >More info 0.42 >More info ulp1c ulp1d mock Original data GEO bulk
53 (Col-0)+200 uM As 0.42 >More info 0.50 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
54 DFPM 0.53 >More info 0.38 >More info control Original data GEO bulk
55 Shoot -Cs 0.40 >More info 0.51 >More info Control-shoot Original data GEO bulk
56 HSP90 Reduced RNAi-A3 0.35 >More info 0.56 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
57 root longitudinal zone-4 NaCl 0.29 >More info 0.62 >More info root longitudinal zone-4 Original data GEO bulk
58 Col BTH 0.23 >More info 0.67 >More info Col rosettes Original data GEO bulk
59 RGA-GR-DEX 0.34 >More info 0.55 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
60 Phytoprostane A1 4 h 0.37 >More info 0.51 >More info Col-0 Original data GEO bulk
61 Laer pretreat GA Flg22 1h 0.17 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
62 root cells epidermis 140mM NaCl 1 hour 0.33 >More info 0.54 >More info root cells epidermis standard 1 hour root cells epidermis Original data
63 dorn1-1 Root 100 mM ATP 30 min -0.33 >More info -0.54 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
64 anac017-2 H2O2 3h -0.50 >More info -0.37 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
65 WT Col-0 Bgh inoculated 0.37 >More info 0.50 >More info WT Col-0 Un-inoculated Original data GEO bulk
66 NJ15 0.32 >More info 0.54 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
67 WT +Pep2 2h 0.51 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
68 IMI 4mM 0.51 >More info 0.35 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
69 WT+chitooctaose 0.35 >More info 0.51 >More info WT+water chitooctaose seedlings Original data GEO bulk
70 WT 6H Cold 0.35 >More info 0.51 >More info WT control Original data GEO bulk
71 Seedling-HeatStressed POLYSOMESmRNA 0.35 >More info 0.50 >More info Seedling-control POLYSOMESmRNA seedling Original data
72 Laer pretreat JA Flg22 0h 0.24 >More info 0.60 >More info Laer pretreat water control leaf discs Original data GEO bulk
73 5-Triiodobenzoic acid3 h 0.28 >More info 0.55 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
74 Anoxia 0.27 >More info 0.56 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
75 Root wt CLE10 0.17 >More info 0.66 >More info Root wt CLE25 root tip Original data GEO bulk
76 gh3.5-1D 48 hpi 0.50 >More info 0.32 >More info Col-0 uninoculated Original data GEO bulk
77 Heat shock optimum 0.17 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
78 Rsch 8h 0.24 >More info 0.58 >More info Rsch CA Leaves Original data
79 Dark 3day ivd 0.51 >More info 0.28 >More info 0h ivd Original data
80 seed germinating in countinuous light 24h SL 0.12 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
81 gapcp1gapcp2 ABA -0.20 >More info -0.58 >More info WT ABA ABA seedling Original data GEO bulk
82 35S::PI ap3-3 35S::AP-GR +DEX 0.22 >More info 0.56 >More info 0hr DEX Original data GEO bulk
83 Red/FR Light45min 0.12 >More info 0.64 >More info FarRed Light 45min Original data Light treatments
84 ABA SA 24h 0.17 >More info 0.59 >More info EtOH 24h 24hr Original data GEO bulk
85 siliques AtHb1 control 0.21 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
86 Selenate (root) 0.21 >More info 0.50 >More info Ws (root) Original data GEO bulk
87 short 12-degree- 0.19 >More info 0.52 >More info control short Original data GEO bulk
88 Root Selenate 0.21 >More info 0.50 >More info Root control 40 micromolar selenate Root Original data GEO bulk
89 fls1-3 0.21 >More info 0.50 >More info Col-0 Rosette leaves Original data
90 Col 8h 0.18 >More info 0.53 >More info Col CA Leaves Original data
91 Blue Light 45 min -0.06 >More info -0.64 >More info White Light 45min Original data Light treatments
92 opr3 OPDA 0.5 h 0.09 >More info 0.57 >More info opr3 0 h Original data GEO bulk
93 Imbibed 1 h (seed) -0.02 >More info 0.67 >More info Dry seed Original data Time course of early seed germination
94 IAA7mII over-expressor IAA Treated -0.10 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
95 6-trichlorophenoxyacetic acid 3 h 0.06 >More info 0.50 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
96 Shoot apex inflorescence (after bolting) -0.09 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
97 gacA -0.04 >More info -0.52 >More info PA14 seedlings Original data GEO bulk
98 35S:MYB28 like miR -0.05 >More info -0.51 >More info WT for miR Original data GEO bulk
99 Col-0 24hpi A. brassicicola 0.51 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
100 CCA1-ox 6am non-polysomal 0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
101 JA 3h -0.15 >More info 0.66 >More info EtOH 3h 3hr Original data GEO bulk
102 Methyl Jasmonate 0.5 h -0.02 >More info 0.52 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
103 bri1-116 -0.25 >More info 0.73 >More info Col seedling Original data GEO bulk
104 GRX-overexpression seedlings MV -0.09 >More info 0.50 >More info WT seedlings MV Seedlings Original data GEO bulk