4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on whole roots 140 mM NaCl 1 hour
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List of experiments correlated with "whole roots 140 mM NaCl 1 hour"  Help Download transcriptome of top 30
Score Experiment Correlation from
whole roots 140 mM NaCl 1 hour		 Correlation to
whole roots 140 mM NaCl 1 hour		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 whole roots 140 mM NaCl 1 hour 1.00 >More info 1.00 >More info whole roots standard Original data GEO bulk
2 whole roots 140 mM NaCl 30 minutes 0.92 >More info 0.94 >More info whole roots standard Original data GEO bulk
3 NaCl Col 0.86 >More info 0.84 >More info Col Original data GEO bulk
4 whole roots 140 mM NaCl 4 hour 0.82 >More info 0.82 >More info whole roots standard Original data GEO bulk
5 root longitudinal zone-4 NaCl 0.79 >More info 0.84 >More info root longitudinal zone-4 Original data GEO bulk
6 root stele 40 mM NaCls 0.82 >More info 0.79 >More info root stele Original data GEO bulk
7 root endodermis and quiescent center 40 mM NaCl 0.78 >More info 0.77 >More info root endodermis and quiescent center Original data GEO bulk
8 root cells cortex 140mM NaCl 1 hour 0.80 >More info 0.72 >More info root cells cortex standard 1 hour root cells cortex Original data
9 ABA 1 h 0.64 >More info 0.85 >More info Mock 1 h Original data Basic hormone treatment of seedlings
10 root longitudinal zone-3 NaCl 0.74 >More info 0.75 >More info root longitudinal zone-3 Original data GEO bulk
11 NJ15 0.72 >More info 0.74 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
12 root cells epidermis 140mM NaCl 1 hour 0.74 >More info 0.71 >More info root cells epidermis standard 1 hour root cells epidermis Original data
13 WT 3H Cold 0.62 >More info 0.82 >More info WT control Original data GEO bulk
14 whole roots 140 mM NaCl 16 hour 0.74 >More info 0.68 >More info whole roots standard Original data GEO bulk
15 root columella root cap 40 mM NaCl 0.65 >More info 0.76 >More info root columella root cap Original data GEO bulk
16 Salt Stress 24 h (root) 0.78 >More info 0.62 >More info Stress mock 24 h (root) Original data Stress treatments
17 root epidermis and lateral root cap 40 mM NaCl 0.75 >More info 0.65 >More info root epidermis and lateral root cap Original data GEO bulk
18 Osmotic Stress 24 h (root) 0.76 >More info 0.62 >More info Stress mock 24 h (root) Original data Stress treatments
19 WT-Dry 0.69 >More info 0.68 >More info WT-CK dehydration treatment 1h Original data
20 root cells stele 140mM NaCl 1 hour 0.72 >More info 0.65 >More info root cells stele standard 1 hour root cells stele Original data
21 root longitudinal zone-2 NaCl 0.61 >More info 0.74 >More info root longitudinal zone-2 Original data GEO bulk
22 whole roots 140 mM NaCl 32 hour 0.74 >More info 0.61 >More info whole roots standard Original data GEO bulk
23 root cells endodermis 140mM NaCl 1 hour 0.70 >More info 0.64 >More info root cells endodermis standard 1 hour root cells endodermis Original data
24 6h +Pi -0.64 >More info -0.70 >More info 6h -Pi root Original data GEO bulk
25 WT H2O2 3h 0.68 >More info 0.65 >More info WT water 3h 3h_H2O2 Original data GEO bulk
26 ABA 3 h 0.65 >More info 0.67 >More info Mock 3 h Original data Basic hormone treatment of seedlings
27 root cells stele 140mM NaCl 3 hours 0.66 >More info 0.63 >More info root cells stele standard 1 hour root cells stele Original data
28 8hr-pH4.5 0.64 >More info 0.64 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
29 WT 24H Cold 0.68 >More info 0.59 >More info WT control Original data GEO bulk
30 Col-0 low oxygen 0.62 >More info 0.63 >More info Col-0 control low oxygen root Original data GEO bulk
31 root cells epidermis 140mM NaCl 3 hours 0.62 >More info 0.63 >More info root cells epidermis standard 1 hour root cells epidermis Original data
32 AgNO3 3 h 0.54 >More info 0.71 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
33 Col-0 under 4 days salt 0.68 >More info 0.56 >More info Col-0 under control 4 days salt treatment rosette Original data
34 WT 6H Cold 0.53 >More info 0.71 >More info WT control Original data GEO bulk
35 root Dosed gold 0.66 >More info 0.57 >More info root No gold .125 mM gold 24 h roots Original data
36 ABA DFPM 0.68 >More info 0.55 >More info control Original data GEO bulk
37 0.125 mM gold 24 h 0.66 >More info 0.57 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
38 Cold Stress 24 h (root) 0.68 >More info 0.54 >More info Stress mock 24 h (root) Original data Stress treatments
39 dicamba 0.66 >More info 0.56 >More info WT mock whole seedling Original data GEO bulk
40 GA 120min 0.60 >More info 0.62 >More info CON120 GA 120 min. root tips Original data GEO bulk
41 root cortex 40 mM NaCl 0.64 >More info 0.57 >More info root cortex Original data GEO bulk
42 oas-a1.1 Cd 18h 0.49 >More info 0.72 >More info Cd 18h root Root Original data GEO bulk
43 ABA 0.5 h 0.64 >More info 0.56 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
44 WT 30μM arsenate 8 hours. 0.54 >More info 0.66 >More info WT control (not supplemented). Original data
45 HSP90 Reduced RNAi-A2 0.56 >More info 0.64 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
46 Whole root - low pH 12H 0.49 >More info 0.71 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
47 K starvation (root) 0.66 >More info 0.53 >More info Ws (root) Original data GEO bulk
48 root longitudinal zone-1 NaCl 0.46 >More info 0.73 >More info root longitudinal zone-1 Original data GEO bulk
49 24h +Pi -0.64 >More info -0.54 >More info 24h -Pi root Original data GEO bulk
50 low CO2 + light 0.53 >More info 0.65 >More info normal CO2 + light Original data GEO bulk
51 inhibitor A Treated 0.63 >More info 0.55 >More info Negative Control Original data GEO bulk
52 inhibitor B Treated 0.62 >More info 0.56 >More info Negative Control Original data GEO bulk
53 hira-root -0.57 >More info -0.61 >More info WT-root root Original data
54 rosettes WT drought 0.59 >More info 0.59 >More info rosettes WT watered Original data GEO bulk
55 Seedling-HeatStressed POLYSOMESmRNA 0.61 >More info 0.57 >More info Seedling-control POLYSOMESmRNA seedling Original data
56 flu 0.56 >More info 0.61 >More info WT Col Original data GEO bulk
57 Leafminer damaged seedlings 0.61 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
58 FLIGHT TAGESB plate6 ROOTS 0.55 >More info 0.62 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
59 root cells columella root cap -Fe 0.77 >More info 0.40 >More info whole roots standard Original data GEO bulk
60 Root -K 0.66 >More info 0.51 >More info Control-root Original data GEO bulk
61 Osmotic Stress 24 h (shoot) 0.60 >More info 0.56 >More info Stress mock 24 h (shoot) Original data Stress treatments
62 root protophloem 40 mM NaCl 0.62 >More info 0.54 >More info root protophloem Original data GEO bulk
63 TNT-seedlings 0.50 >More info 0.66 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
64 Col0-PsmES4326-24hpi 0.55 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
65 flu over-tAPX 0.56 >More info 0.60 >More info WT Col Original data GEO bulk
66 Col-0 flu HL 3h 0.62 >More info 0.53 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
67 IAA/inhibitor B Treated 0.51 >More info 0.64 >More info IAA Treated Original data GEO bulk
68 root cells stele 140mM NaCl 8 hours 0.59 >More info 0.55 >More info root cells stele standard 1 hour root cells stele Original data
69 bak1-3 +Pep2 10h 0.61 >More info 0.53 >More info WT +Pep2 10h Pep2 Original data GEO bulk
70 CMP 24hr 0.64 >More info 0.50 >More info Acetone 24hr root Original data GEO bulk
71 Protoplast Induced 0.50 >More info 0.64 >More info Uninduced Original data GEO bulk
72 Seedling-HeatStressed TOTALmRNA 0.56 >More info 0.57 >More info Seedling-control TOTALmRNA seedling Original data
73 Phytoprostane A1 4 h 0.51 >More info 0.61 >More info Col-0 Original data GEO bulk
74 rosette Light Wounded 0.56 >More info 0.56 >More info rosette Light Control Original data GEO bulk
75 WT drought 0.56 >More info 0.55 >More info WT control All aerial tissue Original data GEO bulk
76 root cells endodermis 140mM NaCl 3 hours 0.59 >More info 0.52 >More info root cells endodermis standard 1 hour root cells endodermis Original data
77 CMP 4hr 0.57 >More info 0.54 >More info Acetone 4hr root Original data GEO bulk
78 HSP90 Reduced RNAi-B1 0.52 >More info 0.59 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
79 9 hr Hypoxia 1 hr recovery Total RNA 0.49 >More info 0.62 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
80 WT seedlings MV 0.54 >More info 0.56 >More info WT seedlings control Seedlings Original data GEO bulk
81 root cells stele 140mM NaCl 32 hours 0.52 >More info 0.58 >More info root cells stele standard 1 hour root cells stele Original data
82 IAA/inhibitor A Treated 0.57 >More info 0.53 >More info IAA Treated Original data GEO bulk
83 root BA 12h 0.51 >More info 0.59 >More info root control 12h boron (5mM) root Original data GEO bulk
84 root cells cortex 140mM NaCl 8 hours 0.57 >More info 0.53 >More info root cells cortex standard 1 hour root cells cortex Original data
85 12m.KCl 0.44 >More info 0.66 >More info To. KCl 14 day old Roots Original data GEO bulk
86 rosettes myoox drought 0.53 >More info 0.56 >More info rosettes myoox watered Original data GEO bulk
87 WT AntimycinA 3h 0.55 >More info 0.54 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
88 root cells epidermis 140mM NaCl 8 hours 0.55 >More info 0.53 >More info root cells epidermis standard 1 hour root cells epidermis Original data
89 siliques AtHb1 control 0.56 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
90 root cells stele -Fe 0.65 >More info 0.43 >More info whole roots standard Original data GEO bulk
91 9m.KCl 0.52 >More info 0.56 >More info To. KCl 14 day old Roots Original data GEO bulk
92 Chitosan 3h Treatment 0.57 >More info 0.51 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
93 Red/FR Light45min 0.32 >More info 0.76 >More info FarRed Light 45min Original data Light treatments
94 plant (tga2-5-6) 4h phytoprostane A1 0.43 >More info 0.65 >More info plant (tga2-5-6) 4h control Original data GEO bulk
95 Whole root - low pH 24H 0.45 >More info 0.63 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
96 4C 1h 0.31 >More info 0.77 >More info 4C 0h Original data GEO bulk
97 A. thaliana-A. lyrata hybrid -0.48 >More info -0.60 >More info A. thaliana mature leaves before flowering Original data GEO bulk
98 tt4 UV 0.52 >More info 0.55 >More info UV aerial region Original data GEO bulk
99 Col in Pi deficiency medium 0.50 >More info 0.57 >More info Col in control medium root Original data GEO bulk
100 2 hr Hypoxia Total RNA 0.57 >More info 0.50 >More info 2 hr Non-Stress Total RNA seedlings Original data GEO bulk
101 dor drought 0.57 >More info 0.50 >More info WT drought Original data GEO bulk
102 coi1-2 0.49 >More info 0.58 >More info Col-0 mock Whole seedling Original data GEO bulk
103 Cocultivation 8 hrs root 0.47 >More info 0.60 >More info Mock cocultivation 8 hrs root Root Original data
104 ABA control 0.53 >More info 0.53 >More info No ABA control Original data GEO bulk
105 Leafminer locally damaged thaliana seedlings 0.61 >More info 0.45 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
106 root cells endodermis and quiescent center -Fe 0.72 >More info 0.34 >More info whole roots standard Original data GEO bulk
107 9 hr Hypoxia Total RNA 0.51 >More info 0.55 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
108 Anoxia 0.59 >More info 0.47 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
109 Heat shock optimum 0.41 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
110 bbx24 in Simulated Shade -0.59 >More info -0.46 >More info WT in simulated shade shade seedling Original data
111 pmr5 pmr6 0.55 >More info 0.50 >More info Col-0 Original data GEO bulk
112 root cells cortex 140mM NaCl 3 hours 0.56 >More info 0.49 >More info root cells cortex standard 1 hour root cells cortex Original data
113 Fenclorim 4hr 0.55 >More info 0.50 >More info Acetone 4hr root Original data GEO bulk
114 5-Triiodobenzoic acid3 h 0.50 >More info 0.55 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
115 rdr6-15 -0.63 >More info -0.42 >More info Col-0 Original data GEO bulk
116 col-5 DC3000 12h 0.55 >More info 0.50 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
117 IMI 4mM 0.54 >More info 0.51 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
118 M6PR transgenic leaf 100mM NaCl -0.39 >More info -0.66 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
119 WT+H2O2 0.48 >More info 0.57 >More info WT H2O2 Original data GEO bulk
120 Col-0 2HS 0.57 >More info 0.47 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
121 Salt Stress 24 h (shoot) 0.56 >More info 0.48 >More info Stress mock 24 h (shoot) Original data Stress treatments
122 nhx5-2/nhx6 0.56 >More info 0.48 >More info WT Rosette leaf Original data GEO bulk
123 Fe starvation 72 h 0.46 >More info 0.58 >More info Control Original data GEO bulk
124 whole roots -Fe 72 hour 0.46 >More info 0.58 >More info whole roots standard Original data GEO bulk
125 Col-0 0h NAA 0.48 >More info 0.56 >More info Col-0 6h MOCK Original data GEO bulk
126 vte2 leaves 0h LT -0.40 >More info -0.64 >More info Col leaves 0h LT h 9-11th adult leaves Original data
127 rosette Dark Wounded 0.53 >More info 0.50 >More info rosette Dark Control Original data GEO bulk
128 Seedling KUA1-IOX est 0.50 >More info 0.53 >More info Seedling KUA1-IOX mock Original data
129 rosettes drought 0.53 >More info 0.50 >More info rosettes watered Original data GEO bulk
130 Col-0 37C 0.59 >More info 0.44 >More info Col-0 22C Original data GEO bulk
131 root cells epidermis 140mM NaCl 48 hours 0.52 >More info 0.51 >More info root cells epidermis standard 1 hour root cells epidermis Original data
132 P.p 30hai 0.55 >More info 0.48 >More info At-Control roots Original data GEO bulk
133 low CO2 + dark 0.49 >More info 0.54 >More info normal CO2 + light Original data GEO bulk
134 root cells stele 140mM NaCl 48 hours 0.49 >More info 0.54 >More info root cells stele standard 1 hour root cells stele Original data
135 dorn1-1 Root 100 mM ATP 30 min -0.38 >More info -0.65 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
136 Heat and anoxia 0.55 >More info 0.47 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
137 SCR 48hr-S 0.52 >More info 0.50 >More info SCR 0hr endodermis Original data
138 whole roots -Fe 48 hour 0.44 >More info 0.58 >More info whole roots standard Original data GEO bulk
139 tetraploid 0.39 >More info 0.63 >More info diploid Original data GEO bulk
140 seedlings +5AC 0.62 >More info 0.39 >More info control seedlings 10-day old whole seedling Original data GEO bulk
141 Col-O high light 0.56 >More info 0.45 >More info Col-O bule light Original data GEO bulk
142 root cells cortex 140mM NaCl 48 hours 0.53 >More info 0.48 >More info root cells cortex standard 1 hour root cells cortex Original data
143 low water potential 0.54 >More info 0.47 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
144 sicy-192 gun1-101 cotyledons 0.40 >More info 0.61 >More info WT cotyledons cotyledons Original data
145 Fenclorim 24hr 0.59 >More info 0.41 >More info Acetone 24hr root Original data GEO bulk
146 SCR 24hr-S 0.54 >More info 0.46 >More info SCR 0hr endodermis Original data
147 nhx5-1/nhx6 0.54 >More info 0.46 >More info WT Rosette leaf Original data GEO bulk
148 pmr5 0.54 >More info 0.46 >More info Col-0 Original data GEO bulk
149 afb3-1 2h KNO3 0.48 >More info 0.52 >More info Ws 2h KNO3 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
150 Leaf wounded 0.35 >More info 0.65 >More info Leaf control vegetative leaf Original data GEO bulk
151 root cells cortex 140mM NaCl 20 hours 0.48 >More info 0.52 >More info root cells cortex standard 1 hour root cells cortex Original data
152 RRE2 Chitin 0.63 >More info 0.36 >More info Chitin Original data GEO bulk
153 DUO1 induced 24h 0.60 >More info 0.39 >More info 24hr-not-induced whole plant Original data GEO bulk
154 WT seedlings NaCl 0.52 >More info 0.47 >More info WT seedlings control Seedlings Original data GEO bulk
155 root cells epidermis 140mM NaCl 20 hours 0.50 >More info 0.49 >More info root cells epidermis standard 1 hour root cells epidermis Original data
156 root cells -Fe 0.69 >More info 0.30 >More info whole roots standard Standard media transferred to -Fe media for 24 hours prior to harvesting tissue Original data GEO bulk
157 SA 0.49 >More info 0.50 >More info WT mock Whole seedling Original data GEO bulk
158 chito-octamer 0.49 >More info 0.50 >More info Col Mock Original data GEO bulk
159 line J2731-5 days control + 2 days salt s 0.46 >More info 0.53 >More info line J2731-7 days-control Original data
160 root cells stele 140mM NaCl 20 hours 0.43 >More info 0.56 >More info root cells stele standard 1 hour root cells stele Original data
161 DUO1 induced 12h 0.57 >More info 0.41 >More info 12hr-not-induced whole plant Original data GEO bulk
162 nia1nia2 0.57 >More info 0.41 >More info Col-0 whole seedlings Original data GEO bulk
163 pepr1-1 Pepr2-3 +Pep2 10h -0.41 >More info -0.57 >More info WT +Pep2 10h Pep2 Original data GEO bulk
164 Sulfometuron EC50 0.47 >More info 0.51 >More info Carrier Original data GEO bulk
165 CMV-WT 0.52 >More info 0.45 >More info Mock-At Aerial tissues Original data GEO bulk
166 35S:RPS4 eds1-2 24h -0.54 >More info -0.43 >More info 35S:RPS4 24h leaves Original data
167 RRE1 Chitin 0.65 >More info 0.31 >More info Chitin Original data GEO bulk
168 upf3 0.53 >More info 0.43 >More info WT whole plant Original data GEO bulk
169 FarRed Light 45min -0.19 >More info -0.77 >More info White Light 45min Original data Light treatments
170 roottip hypoxia total 0.43 >More info 0.53 >More info roottip control total Original data GEO bulk
171 Nicotinamide-57hr 0.44 >More info 0.52 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
172 15m.KCl 0.45 >More info 0.51 >More info To. KCl 14 day old Roots Original data GEO bulk
173 Col ozone 2d 0.55 >More info 0.39 >More info Col clean-air 2d ozone Original data GEO bulk
174 Root -Cs 0.27 >More info 0.67 >More info Control-root Original data GEO bulk
175 Shoot -K 0.52 >More info 0.42 >More info Control-shoot Original data GEO bulk
176 K starvation (shoot) 0.52 >More info 0.42 >More info Ws (shoot) Original data GEO bulk
177 WT leaf-drought 0.44 >More info 0.50 >More info WT leaf-well watered Original data GEO bulk
178 toc1-1-81hr 0.41 >More info 0.53 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
179 ABA SA 3h 0.37 >More info 0.57 >More info EtOH 3h 3hr Original data GEO bulk
180 rcf1-1 cold 24h 0.41 >More info 0.53 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
181 cpr5scv1 0.55 >More info 0.38 >More info WT(COL) Original data GEO bulk
182 GA4 3 h (ga1 seed) 0.55 >More info 0.38 >More info Mock 3 h Original data Effect of gibberellin during seed imbibition
183 Col-0 2h NAA 0.53 >More info 0.40 >More info Col-0 6h MOCK Original data GEO bulk
184 lug3 flowers 0.55 >More info 0.38 >More info WT-flowers flowers Original data GEO bulk
185 toc1-1-53hr 0.39 >More info 0.54 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
186 npr1 sni1 brca2a SA -0.39 >More info -0.54 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
187 R. solani AG8 0.37 >More info 0.56 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
188 pepr1-1 Pepr2-3 +Pep2 2h -0.40 >More info -0.53 >More info WT +Pep2 2h Pep2 Original data GEO bulk
189 ein5-1 ski2-3 0.51 >More info 0.42 >More info Col-0 aerial tissue Original data
190 SCL3 OE -0.51 >More info -0.42 >More info Col-0 whole root Original data GEO bulk
191 3x(p) 0.31 >More info 0.62 >More info 2x two week old seedlings Original data
192 6 h SL Attim 17-1 1 -0.53 >More info -0.39 >More info 0 h Attim 17-1 1 seed Original data
193 atr mitomycin C 0.58 >More info 0.34 >More info WT mitomycin C shoot apical meristem Original data
194 embryo ABA 0.51 >More info 0.41 >More info embryo-control ABA embryo Original data GEO bulk
195 aox1a(line) MLD stressed 0.52 >More info 0.39 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
196 gul2-1 mutant 0.52 >More info 0.39 >More info WT 7 day-old whole seedlings Original data
197 atr zebularine 0.63 >More info 0.28 >More info WT zebularine shoot apical meristem Original data
198 35S::RSL4 -0.39 >More info -0.52 >More info Col-0 Control root Original data GEO bulk
199 Cor 10h 0.40 >More info 0.51 >More info Mock 10h Cor Original data GEO bulk
200 Col BTH 0.24 >More info 0.67 >More info Col rosettes Original data GEO bulk
201 rosettes atx drought 0.62 >More info 0.29 >More info rosettes atx watered Original data GEO bulk
202 abi1 hypocotyl 0.34 >More info 0.56 >More info Ler hypocotyl hypocotyl Original data GEO bulk
203 Selenate (shoot) 0.51 >More info 0.39 >More info Ws (shoot) Original data GEO bulk
204 csn5 (csn5a-2 csn5b) light 0.53 >More info 0.37 >More info WT light Original data GEO bulk
205 Shoot Selenate 0.51 >More info 0.39 >More info Shoot control 40 micromolar selenate Shoot Original data GEO bulk
206 C2 leaf-drought 0.39 >More info 0.51 >More info C2 leaf-well watered Original data GEO bulk
207 toc1-1-65hr 0.37 >More info 0.53 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
208 Dark 3day ivd 0.57 >More info 0.33 >More info 0h ivd Original data
209 OXUPB1-2 meristematic zone 0.60 >More info 0.30 >More info Col-0 meristematic zone Seedling root meristem zone Original data GEO bulk
210 seedling 24h after HZE atm-1 0.55 >More info 0.34 >More info seedling day 2 unirradiated atm-1 24h Original data
211 Mutant axr3-1 (IAA) 0.28 >More info 0.61 >More info Col (IAA) Original data GEO bulk
212 WT+chitooctaose 0.38 >More info 0.51 >More info WT+water chitooctaose seedlings Original data GEO bulk
213 Kas-1 -Fe 24h -0.36 >More info -0.53 >More info Kas-1 +Fe 24h roots Original data GEO bulk
214 Kas -Fe 24h Roots -0.36 >More info -0.53 >More info Kas +Fe 24h Roots Original data GEO bulk
215 Shoot -Cs 0.35 >More info 0.54 >More info Control-shoot Original data GEO bulk
216 Selenate (root) 0.29 >More info 0.60 >More info Ws (root) Original data GEO bulk
217 Root Selenate 0.29 >More info 0.60 >More info Root control 40 micromolar selenate Root Original data GEO bulk
218 35S:RPS4 rrs1-11 T0 0.32 >More info 0.56 >More info 35S:RPS4 T0 leaves Original data
219 oas-a1.1 Cd 24h 0.51 >More info 0.37 >More info Cd 24h root Shoot Original data GEO bulk
220 toc1-1-77hr 0.53 >More info 0.35 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
221 Cycloheximide 3 h 0.36 >More info 0.52 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
222 CeO2 germinant -0.24 >More info -0.64 >More info Millipore Water germinant CeO2 seedling Original data
223 clf-28 swn-7 0.56 >More info 0.31 >More info Col whole plant Original data GEO bulk
224 Heat 0.53 >More info 0.34 >More info Control 90 minutes at 38°C. Original data GEO bulk
225 anac017-2 H2O2 3h -0.54 >More info -0.33 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
226 Nicotinamide-53hr 0.34 >More info 0.53 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
227 Ws HS 0.33 >More info 0.54 >More info Ws control heat shocked seedling Original data GEO bulk
228 6 h SL WT -0.51 >More info -0.36 >More info 0 h WT seed Original data
229 Pto inoculated 0.50 >More info 0.37 >More info col Original data GEO bulk
230 toc1-1-85hr 0.35 >More info 0.52 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
231 bHLH122 ox -0.36 >More info -0.51 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
232 triploid female excess -0.23 >More info -0.64 >More info tetraploid Original data GEO bulk
233 atmospheric CO2 high Mg shoot 0.54 >More info 0.32 >More info atmospheric CO2 normal Mg shoot Shoot Original data
234 P.syringae vir 4 h (leaf) 0.54 >More info 0.32 >More info Mock 4 h (leaf) Original data Elicitor treatments
235 Col-0-3h IAA 0.51 >More info 0.35 >More info Col-0-0h IAA whole plant Original data GEO bulk
236 seedling -S Exp 0.27 >More info 0.59 >More info seedling FN Exp seedling Original data
237 Rose Bengal 0.5 uM 0.30 >More info 0.55 >More info Control RB and PER Rose Bengal Original data
238 seedlings-week-old RECA1-overexpressing
transgenic		 0.32 >More info 0.53 >More info seedlings-week-old Col-0 seedlings Original data
239 arr-dmso-sample 0.50 >More info 0.35 >More info Wt-dmso-sample seedling Original data
240 atmospheric CO2 low Mg shoot 0.57 >More info 0.28 >More info atmospheric CO2 normal Mg shoot Shoot Original data
241 bri1-116 0.12 >More info 0.73 >More info Col seedling Original data GEO bulk
242 hsfa1 quadruple mutant 0.52 >More info 0.32 >More info WT (Col-0) whole seedling Original data GEO bulk
243 toc1-1-73hr 0.28 >More info 0.56 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
244 Chemically 0.17 >More info 0.67 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
245 entire vegetative rosette 0.59 >More info 0.25 >More info Col-0 Mock WL entire vegetative rosette Original data
246 AFB1 0h 0.50 >More info 0.33 >More info Col 0h Leaf Original data GEO bulk
247 plant (Col-0) 4h OPDA 0.51 >More info 0.32 >More info plant (Col-0) 4h control Original data GEO bulk
248 OPDA 4 h 0.51 >More info 0.32 >More info Col-0 Original data GEO bulk
249 9 hr Hypoxia 1 hr recovery IP RNA 0.33 >More info 0.50 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
250 Laer pretreat GA Flg22 1h 0.11 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
251 rli 0.52 >More info 0.29 >More info WT whole plant Original data GEO bulk
252 SLWF infested 0.61 >More info 0.20 >More info SLWF uninfested rosette tissue Original data GEO bulk
253 mp-B4149 mutant IAA 0.60 >More info 0.20 >More info GR-bdl IAA Original data GEO bulk
254 CDB1-Knockout -0.19 >More info -0.61 >More info WT Original data GEO bulk
255 desiccated mature pollen grains -0.25 >More info -0.55 >More info hydrated pollen grains Original data GEO bulk
256 nhx6 0.55 >More info 0.24 >More info WT Rosette leaf Original data GEO bulk
257 downy mildew cotyledons late stage 0.53 >More info 0.26 >More info mock inoculated Cotyledons Original data GEO bulk
258 35S:RPS4 eds1-2 2h -0.27 >More info -0.52 >More info 35S:RPS4 2h leaves Original data
259 Ts5 roots 2hr KCl control 0.56 >More info 0.22 >More info Col0 roots 2hr KCl control root Original data GEO bulk
260 ACN1-2 -0.20 >More info -0.58 >More info col-7 Original data GEO bulk
261 root cells epidermis and lateral root cap -Fe 0.54 >More info 0.22 >More info whole roots standard Original data GEO bulk
262 SA 4mM 0.50 >More info 0.26 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
263 Col ozone 3h 0.24 >More info 0.52 >More info Col clean-air 3h ozone Original data GEO bulk
264 Imidazolinone EC50 0.52 >More info 0.23 >More info Carrier (Imidazolinone) Original data GEO bulk
265 penta MeJA 1h 0.50 >More info 0.25 >More info Laer MeJA 1h leaf discs Original data GEO bulk
266 oligomycin 1 h 0.21 >More info 0.54 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
267 anac017-1 water 3h 0.53 >More info 0.21 >More info WT water 3h 3h_water Original data GEO bulk
268 AsAKiin11 T3 -0.59 >More info -0.15 >More info C2 C2del and (As)AKiin11 control T3 three days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
269 IAA 3 h 0.20 >More info 0.54 >More info Mock 3 h Original data Basic hormone treatment of seedlings
270 root longitudinal zone-4 pH 4.6 0.15 >More info 0.59 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
271 root longitudinal zone-2 pH 4.6 0.21 >More info 0.53 >More info root longitudinal zone-2 pH 5.7 Original data GEO bulk
272 Imbibed 1 h (seed) 0.22 >More info 0.50 >More info Dry seed Original data Time course of early seed germination
273 ABA JA 3h 0.20 >More info 0.52 >More info EtOH 3h 3hr Original data GEO bulk
274 xyl-grown cell culture- 1h 1mM Suc 0.13 >More info 0.59 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
275 bZIP1ko mutant N+Light- 0.21 >More info 0.50 >More info WT-sib N+Light- whole plant Original data GEO bulk
276 Cs root -0.20 >More info -0.51 >More info control root Original data GEO bulk
277 Elevated CO2 AMPLE N NIGHT 0.20 >More info 0.51 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
278 RGA-GR-DEX 0.16 >More info 0.54 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
279 Dark -0.15 >More info -0.55 >More info Control Original data GEO bulk
280 35S:ATR1 like miR -0.16 >More info -0.54 >More info WT for miR Original data GEO bulk
281 flu dark 8hours/30 minute light 0.16 >More info 0.53 >More info col dark 8hours/30 minute light Original data GEO bulk
282 shoot hypoxia p35S 0.16 >More info 0.53 >More info shoot hypoxia total Original data GEO bulk
283 ptpks2 -0.14 >More info -0.55 >More info Col-WT leaves Original data GEO bulk
284 IAA 2h 0.18 >More info 0.51 >More info control 2h root Original data GEO bulk
285 ws 24h4c q8ws 0.50 >More info 0.16 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
286 pmr4-1 powdery mildew 0.15 >More info 0.51 >More info WT powdery mildew uninoculated Original data GEO bulk
287 root longitudinal zone-4 -Fe 0.51 >More info 0.14 >More info root longitudinal zone-4 standard Original data GEO bulk
288 myb3 myb3r4d 0.08 >More info 0.56 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
289 -Sulfate 24 h 0.09 >More info 0.52 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
290 opr3 OPDA 0.5 h 0.08 >More info 0.53 >More info opr3 0 h Original data GEO bulk
291 Col-0 24hpi A. brassicicola 0.56 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
292 vte2 leaves 120h LT 0.54 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
293 siliques WT hypoxia 0.57 >More info 0.01 >More info siliques WT control hypoxia silique Original data GEO bulk
294 SCR-GR Time 1H Dex 0.06 >More info 0.51 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
295 3x(m) 0.02 >More info 0.54 >More info 2x two week old seedlings Original data
296 CCA1-ox 6am non-polysomal 0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
297 seed germinating in countinuous light 24h SL -0.18 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
298 seedling SPL13 -0.52 >More info 0.03 >More info seedling Col-0 Original data GEO bulk
299 Shoot apex inflorescence (after bolting) -0.16 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
300 IAA7mII over-expressor IAA Treated -0.21 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
301 Col PSTDC3000 24h 0.57 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
302 gpa1-4/agb1-2 ozone 2d 0.10 >More info -0.52 >More info Col ozone 2d ozone Original data GEO bulk
303 spores of Gigaspora rosea -0.51 >More info 0.11 >More info Control Original data GEO bulk
304 QC pSCR 3h BL -0.26 >More info 0.62 >More info QC pSCR 0h BL brassinosteroid root Original data
305 ABA 0.53 >More info -0.22 >More info control Original data GEO bulk