4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on root cells epidermis and lateral root cap -Fe
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List of experiments correlated with "root cells epidermis and lateral root cap -Fe"  Help Download transcriptome of top 30
Score Experiment Correlation from
root cells epidermis and lateral root cap -Fe		 Correlation to
root cells epidermis and lateral root cap -Fe		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 root cells epidermis and lateral root cap -Fe 1.00 >More info 1.00 >More info whole roots standard Original data GEO bulk
2 root cells -Fe 0.87 >More info 0.90 >More info whole roots standard Standard media transferred to -Fe media for 24 hours prior to harvesting tissue Original data GEO bulk
3 root cells columella root cap -Fe 0.85 >More info 0.85 >More info whole roots standard Original data GEO bulk
4 root cells stele -Fe 0.71 >More info 0.82 >More info whole roots standard Original data GEO bulk
5 protoplasted roots pH4.6 0.74 >More info 0.78 >More info Whole root - Std pH 1H pH 4.6 for 24H Original data GEO bulk
6 root cells endodermis and quiescent center -Fe 0.67 >More info 0.78 >More info whole roots standard Original data GEO bulk
7 root longitudinal zone-4 low sulfur 0.70 >More info 0.75 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
8 root protoplasts 40 mM NaCl 0.60 >More info 0.68 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
9 2hr transitory KNO3 PrR cell 0.72 >More info 0.45 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
10 Selenate (root) 0.46 >More info 0.70 >More info Ws (root) Original data GEO bulk
11 abi1 hypocotyl 0.45 >More info 0.71 >More info Ler hypocotyl hypocotyl Original data GEO bulk
12 Root Selenate 0.46 >More info 0.70 >More info Root control 40 micromolar selenate Root Original data GEO bulk
13 Cycloheximide 3 h 0.62 >More info 0.53 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
14 root stele -S 0.48 >More info 0.67 >More info root stele pH5.7 Original data GEO bulk
15 FLIGHT TAGESB plate6 ROOTS 0.47 >More info 0.64 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
16 ERF115OE roottip5days -0.57 >More info -0.53 >More info Col-0 roottip5days root tips Original data
17 lateral root cap-columella pBRN2 0h BL 0.72 >More info 0.38 >More info WR 35S 0h BL brassinosteroid root Original data
18 root cells cortex -Fe 0.81 >More info 0.26 >More info whole roots standard Original data GEO bulk
19 (Col-0)+200 uM As 0.50 >More info 0.56 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
20 2hr transitory KNO3 SR cell 0.51 >More info 0.53 >More info 2hr KCl control PrR cell Stele root cells Original data GEO bulk
21 WT seedlings MV 0.47 >More info 0.57 >More info WT seedlings control Seedlings Original data GEO bulk
22 cngc1-3 -0.59 >More info -0.41 >More info Col-0 root Original data GEO bulk
23 cngc19 -0.63 >More info -0.36 >More info Col-0 root Original data GEO bulk
24 GA4 3 h (ga1 seed) 0.56 >More info 0.42 >More info Mock 3 h Original data Effect of gibberellin during seed imbibition
25 aba1 hypocotyl 0.50 >More info 0.48 >More info Ler hypocotyl hypocotyl Original data GEO bulk
26 (Col-0)+100 uM As 0.45 >More info 0.52 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
27 Col-0 6h NAA 0.38 >More info 0.59 >More info Col-0 6h MOCK Original data GEO bulk
28 35S:RPS4 eds1-2 2h -0.35 >More info -0.62 >More info 35S:RPS4 2h leaves Original data
29 NAA 6h 0.37 >More info 0.59 >More info before treatment NAA root Original data GEO bulk
30 myb61 xylem 0.32 >More info 0.64 >More info wt xylem xylem Original data GEO bulk
31 WT 3H Cold 0.32 >More info 0.63 >More info WT control Original data GEO bulk
32 Kas2 roots 2hr KCl control 0.45 >More info 0.50 >More info Col0 roots 2hr KCl control root Original data GEO bulk
33 WT Seedling BL+ABA 0.50 >More info 0.44 >More info WT Seedling BL Original data GEO bulk
34 root longitudinal zone-3 low sulfur 0.33 >More info 0.61 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
35 4C 1h 0.42 >More info 0.51 >More info 4C 0h Original data GEO bulk
36 mp-B4149 mutant IAA 0.54 >More info 0.38 >More info GR-bdl IAA Original data GEO bulk
37 Protoplast Induced 0.28 >More info 0.64 >More info Uninduced Original data GEO bulk
38 inhibitor B Treated 0.28 >More info 0.64 >More info Negative Control Original data GEO bulk
39 SHR-GR Time 3H Dex -0.35 >More info -0.57 >More info SHR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
40 AtGATA2ox 0.54 >More info 0.37 >More info Col seedling Original data GEO bulk
41 5-Triiodobenzoic acid3 h 0.28 >More info 0.62 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
42 bri1-116 0.17 >More info 0.73 >More info Col seedling Original data GEO bulk
43 L2.4 mutant 0.31 >More info 0.59 >More info Wt Original data GEO bulk
44 slr-1 6h NAA -0.30 >More info -0.60 >More info Col-0 6h NAA Original data GEO bulk
45 Laer pretreat GA Flg22 1h 0.17 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
46 root longitudinal zone-4 pH 4.6 0.31 >More info 0.56 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
47 whole roots -Fe 12 hour 0.26 >More info 0.61 >More info whole roots standard Original data GEO bulk
48 myb61 cork 0.33 >More info 0.53 >More info wt cork cork Original data GEO bulk
49 cpctry 0.27 >More info 0.59 >More info Col Original data GEO bulk
50 TNT-seedlings 0.04 >More info 0.81 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
51 WT-Dry 0.26 >More info 0.59 >More info WT-CK dehydration treatment 1h Original data
52 Col0-PsmES4326-24hpi 0.23 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
53 2hr continuous KNO3 PrR cell 0.64 >More info 0.19 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
54 Col-0 2h NAA 0.26 >More info 0.54 >More info Col-0 6h MOCK Original data GEO bulk
55 Leafminer damaged seedlings 0.24 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
56 SHR-GR Time 1H Dex -0.28 >More info -0.50 >More info SHR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
57 Fe starvation 3 h 0.23 >More info 0.54 >More info Control Original data GEO bulk
58 whole roots -Fe 3 hour 0.23 >More info 0.54 >More info whole roots standard Original data GEO bulk
59 Light 0.24 >More info 0.53 >More info Control Original data GEO bulk
60 Leaf wounded 0.22 >More info 0.55 >More info Leaf control vegetative leaf Original data GEO bulk
61 whole roots 140 mM NaCl 30 minutes 0.19 >More info 0.58 >More info whole roots standard Original data GEO bulk
62 Rose Bengal 0.5 uM 0.27 >More info 0.50 >More info Control RB and PER Rose Bengal Original data
63 nrpe1 -0.12 >More info -0.64 >More info WT Original data
64 ask1 mutant flower buds 0.22 >More info 0.54 >More info Ler WT flower buds unopened flower buds Original data GEO bulk
65 whole roots 140 mM NaCl 1 hour 0.22 >More info 0.54 >More info whole roots standard Original data GEO bulk
66 4C 2h(SOIL) 0.22 >More info 0.53 >More info 4C 0h(SOIL) Original data GEO bulk
67 IAA/inhibitor B Treated 0.22 >More info 0.52 >More info IAA Treated Original data GEO bulk
68 OXUPB1-2 meristematic zone 0.24 >More info 0.50 >More info Col-0 meristematic zone Seedling root meristem zone Original data GEO bulk
69 cdpk6-yfp 0.23 >More info 0.50 >More info Kan seedlings Original data GEO bulk
70 ex1 flu dark 8hours/30 minute light 0.20 >More info 0.52 >More info col dark 8hours/30 minute light Original data GEO bulk
71 Heat shock optimum 0.07 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
72 35S:GIF -0.09 >More info -0.63 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
73 eto1-4 +370 -0.20 >More info -0.51 >More info eto1-4 whole seedling Original data GEO bulk
74 Brassinolide 1 h (det2) 0.16 >More info 0.54 >More info Mock 1 h (det2) Original data Basic hormone treatment of seedlings
75 flu dark 8hours/30 minute light 0.16 >More info 0.51 >More info col dark 8hours/30 minute light Original data GEO bulk
76 Col-0 0h NAA 0.08 >More info 0.58 >More info Col-0 6h MOCK Original data GEO bulk
77 IAA7mII over-expressor IAA Treated -0.04 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
78 ms35 silique stage 7 0.08 >More info 0.57 >More info Ler 6.7 anther and filament Original data GEO bulk
79 seed germinating in countinuous light 24h SL -0.05 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
80 atm3 -0.03 >More info -0.58 >More info Col0 whole plant Original data GEO bulk
81 siliques AtHb1 control 0.07 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
82 Kas-1 -Fe 24h -0.08 >More info -0.51 >More info Kas-1 +Fe 24h roots Original data GEO bulk
83 Kas -Fe 24h Roots -0.08 >More info -0.51 >More info Kas +Fe 24h Roots Original data GEO bulk
84 CCA1-ox 6am non-polysomal 0.05 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
85 ABA control 0.53 >More info 0.01 >More info No ABA control Original data GEO bulk
86 Col BTH -0.13 >More info 0.67 >More info Col rosettes Original data GEO bulk
87 BAM8-Lig Ox untreated 0.00 >More info 0.54 >More info WT untreated none shoot Original data
88 Shoot apex inflorescence (after bolting) -0.14 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
89 shoot control p35S 0.01 >More info -0.51 >More info shoot control total Original data GEO bulk
90 TaFLS overexpression line (OE1) -0.09 >More info 0.59 >More info Col-0 Rosette leaves Original data
91 Inflorescences Trp1 -0.16 >More info 0.61 >More info Inflorescences ler inflorescences Original data GEO bulk
92 21h-DC3000 avrRpm1 -0.10 >More info 0.53 >More info 21h-DC3000 leaves Original data GEO bulk