4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on root cells stele -Fe
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List of experiments correlated with "root cells stele -Fe"  Help Download transcriptome of top 30
Score Experiment Correlation from
root cells stele -Fe		 Correlation to
root cells stele -Fe		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 root cells stele -Fe 1.00 >More info 1.00 >More info whole roots standard Original data GEO bulk
2 root cells -Fe 0.91 >More info 0.88 >More info whole roots standard Standard media transferred to -Fe media for 24 hours prior to harvesting tissue Original data GEO bulk
3 root cells endodermis and quiescent center -Fe 0.87 >More info 0.86 >More info whole roots standard Original data GEO bulk
4 root cells columella root cap -Fe 0.85 >More info 0.78 >More info whole roots standard Original data GEO bulk
5 protoplasted roots pH4.6 0.80 >More info 0.79 >More info Whole root - Std pH 1H pH 4.6 for 24H Original data GEO bulk
6 root protoplasts 40 mM NaCl 0.75 >More info 0.83 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
7 root cells epidermis and lateral root cap -Fe 0.82 >More info 0.71 >More info whole roots standard Original data GEO bulk
8 2hr continuous KNO3 SR cell 0.75 >More info 0.77 >More info 2hr KCl control PrR cell Stele root cells Original data GEO bulk
9 2hr KCl control SR cell 0.71 >More info 0.72 >More info 2hr KCl control PrR cell Stele root cells Original data GEO bulk
10 2hr transitory KNO3 SR cell 0.73 >More info 0.69 >More info 2hr KCl control PrR cell Stele root cells Original data GEO bulk
11 Protoplast Induced 0.56 >More info 0.75 >More info Uninduced Original data GEO bulk
12 FLIGHT TAGESB plate6 ROOTS 0.54 >More info 0.69 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
13 IAA/inhibitor B Treated 0.53 >More info 0.66 >More info IAA Treated Original data GEO bulk
14 inhibitor B Treated 0.49 >More info 0.69 >More info Negative Control Original data GEO bulk
15 abi1 hypocotyl 0.51 >More info 0.65 >More info Ler hypocotyl hypocotyl Original data GEO bulk
16 4C 1h 0.46 >More info 0.70 >More info 4C 0h Original data GEO bulk
17 whole roots 140 mM NaCl 30 minutes 0.41 >More info 0.74 >More info whole roots standard Original data GEO bulk
18 Selenate (root) 0.45 >More info 0.68 >More info Ws (root) Original data GEO bulk
19 Root Selenate 0.45 >More info 0.68 >More info Root control 40 micromolar selenate Root Original data GEO bulk
20 root cells cortex -Fe 0.85 >More info 0.26 >More info whole roots standard Original data GEO bulk
21 WT 3H Cold 0.40 >More info 0.70 >More info WT control Original data GEO bulk
22 root longitudinal zone-3 pH 4.6 -0.51 >More info -0.58 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
23 whole roots 140 mM NaCl 1 hour 0.43 >More info 0.65 >More info whole roots standard Original data GEO bulk
24 arr-dmso-sample 0.56 >More info 0.49 >More info Wt-dmso-sample seedling Original data
25 root stele 40 mM NaCls 0.60 >More info 0.44 >More info root stele Original data GEO bulk
26 WT seedlings MV 0.46 >More info 0.58 >More info WT seedlings control Seedlings Original data GEO bulk
27 WT-Dry 0.39 >More info 0.61 >More info WT-CK dehydration treatment 1h Original data
28 stele pSHR 0h BL 0.60 >More info 0.39 >More info WR 35S 0h BL brassinosteroid root Original data
29 ex2 flu dark 8hours/30 minute light 0.37 >More info 0.62 >More info col dark 8hours/30 minute light Original data GEO bulk
30 Bur-0-30min IAA 0.44 >More info 0.53 >More info Bur-0h IAA whole plant Original data GEO bulk
31 aba1 hypocotyl 0.46 >More info 0.51 >More info Ler hypocotyl hypocotyl Original data GEO bulk
32 entire vegetative rosette 0.52 >More info 0.44 >More info Col-0 Mock WL entire vegetative rosette Original data
33 apl -0.50 >More info -0.46 >More info WT phloem Original data
34 root longitudinal zone-4 low sulfur 0.53 >More info 0.43 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
35 bbx24 in Simulated Shade -0.27 >More info -0.68 >More info WT in simulated shade shade seedling Original data
36 IAA/inhibitor A Treated 0.50 >More info 0.45 >More info IAA Treated Original data GEO bulk
37 Methyl Jasmonate 0.5 h 0.39 >More info 0.55 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
38 9m.KCl 0.35 >More info 0.59 >More info To. KCl 14 day old Roots Original data GEO bulk
39 Leaf wounded 0.31 >More info 0.63 >More info Leaf control vegetative leaf Original data GEO bulk
40 myb61 xylem 0.25 >More info 0.69 >More info wt xylem xylem Original data GEO bulk
41 Rose Bengal 0.5 uM 0.35 >More info 0.59 >More info Control RB and PER Rose Bengal Original data
42 rosette Dark Wounded 0.43 >More info 0.50 >More info rosette Dark Control Original data GEO bulk
43 TNT-seedlings 0.14 >More info 0.78 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
44 4C 2h(SOIL) 0.27 >More info 0.63 >More info 4C 0h(SOIL) Original data GEO bulk
45 1h +Pi -0.27 >More info -0.62 >More info 1h -Pi root Original data GEO bulk
46 whole roots 140 mM NaCl 4 hour 0.36 >More info 0.53 >More info whole roots standard Original data GEO bulk
47 DUO1 induced 12h 0.36 >More info 0.52 >More info 12hr-not-induced whole plant Original data GEO bulk
48 Heat shock optimum 0.23 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
49 3x(m) 0.29 >More info 0.59 >More info 2x two week old seedlings Original data
50 35S:VND7-VP16-GR+DEX +CHX 0.29 >More info 0.58 >More info 35S:VND7-VP16-GR+CHX 10mM cycloheximide (CHX) 2hrs followed by 10mM dexamethazone (DEX) 4hrs whole seedlings Original data GEO bulk
51 roottip hypoxia total 0.35 >More info 0.51 >More info roottip control total Original data GEO bulk
52 myb61 cork 0.28 >More info 0.58 >More info wt cork cork Original data GEO bulk
53 -Sulfate 2 h 0.33 >More info 0.52 >More info Mock 2 h (1500uM sulfate) Original data Response to sulfate limitation
54 35S::RSL4 -0.31 >More info -0.54 >More info Col-0 Control root Original data GEO bulk
55 Fe starvation 3 h 0.21 >More info 0.64 >More info Control Original data GEO bulk
56 whole roots -Fe 3 hour 0.21 >More info 0.64 >More info whole roots standard Original data GEO bulk
57 1hr-pH4.5 0.35 >More info 0.50 >More info 1hr-pH6 1hr pH 4.5 roots Original data GEO bulk
58 spx1 spx2 no Pi 0.50 >More info 0.34 >More info WT no Pi seedlings Original data
59 whole roots -Fe 12 hour 0.18 >More info 0.65 >More info whole roots standard Original data GEO bulk
60 WT seedlings IAA 0.32 >More info 0.51 >More info WT seedlings control Seedlings Original data GEO bulk
61 ex1 flu dark 8hours/30 minute light 0.22 >More info 0.61 >More info col dark 8hours/30 minute light Original data GEO bulk
62 5-Triiodobenzoic acid3 h 0.21 >More info 0.60 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
63 bri1-116 0.08 >More info 0.73 >More info Col seedling Original data GEO bulk
64 Chemically 0.23 >More info 0.58 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
65 Methyl Jasmonate 1 h 0.27 >More info 0.53 >More info Mock 1 h Original data Basic hormone treatment of seedlings
66 QK HS 0.24 >More info 0.56 >More info QK control heat shocked seedling Original data GEO bulk
67 Whole root - low pH 3H 0.20 >More info 0.60 >More info Whole root - Std pH 3H pH 4.6 for 3 hr Original data GEO bulk
68 Kas-1 -Fe 24h -0.24 >More info -0.54 >More info Kas-1 +Fe 24h roots Original data GEO bulk
69 Kas -Fe 24h Roots -0.24 >More info -0.54 >More info Kas +Fe 24h Roots Original data GEO bulk
70 plant (tga2-5-6) 4h phytoprostane A1 0.21 >More info 0.55 >More info plant (tga2-5-6) 4h control Original data GEO bulk
71 2hr transitory KNO3 PrR cell 0.57 >More info 0.18 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
72 Col-0 HS 0.22 >More info 0.53 >More info Col-0 control heat shocked seedling Original data GEO bulk
73 WT (Col-0) heat shock 0.22 >More info 0.53 >More info WT (Col-0) whole seedling Original data GEO bulk
74 flu dark 8hours/30 minute light 0.22 >More info 0.52 >More info col dark 8hours/30 minute light Original data GEO bulk
75 15m.KCl 0.22 >More info 0.51 >More info To. KCl 14 day old Roots Original data GEO bulk
76 ABA 1 h 0.20 >More info 0.52 >More info Mock 1 h Original data Basic hormone treatment of seedlings
77 Col0-PsmES4326-24hpi 0.11 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
78 CDB1-Knockout -0.08 >More info -0.64 >More info WT Original data GEO bulk
79 Leafminer damaged seedlings 0.15 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
80 Mutant axr3-1 (IAA) 0.17 >More info 0.53 >More info Col (IAA) Original data GEO bulk
81 WT 3h -P 0.16 >More info 0.53 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
82 Laer pretreat GA Flg22 1h -0.02 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
83 Shoot apex inflorescence (after bolting) -0.00 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
84 2hr continuous KNO3 PrR cell 0.55 >More info 0.09 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
85 CCA1-ox 6am non-polysomal 0.13 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
86 root BA 12h 0.12 >More info 0.51 >More info root control 12h boron (5mM) root Original data GEO bulk
87 gpa1-4/agb1-2 ozone 2d 0.10 >More info 0.52 >More info Col ozone 2d ozone Original data GEO bulk
88 Fe starvation 24 h 0.09 >More info 0.52 >More info Control Original data GEO bulk
89 whole roots -Fe 24hour 0.09 >More info 0.52 >More info whole roots standard Original data GEO bulk
90 Col-0 0h NAA 0.10 >More info 0.50 >More info Col-0 6h MOCK Original data GEO bulk
91 35S:RPS4 rrs1-11 2h -0.09 >More info -0.51 >More info 35S:RPS4 2h leaves Original data
92 siliques AtHb1 control 0.05 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
93 seed germinating in countinuous light 24h SL -0.10 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
94 IAA7mII over-expressor IAA Treated -0.12 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
95 root longitudinal zone-4 NaCl 0.03 >More info 0.53 >More info root longitudinal zone-4 Original data GEO bulk
96 Col BTH -0.17 >More info 0.67 >More info Col rosettes Original data GEO bulk
97 xyl-grown cell culture- 1h 1mM Suc 0.10 >More info -0.51 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
98 cat2-2; 8h switch to ambient CO2 concentrations; -0.14 >More info 0.52 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
99 35S:MYB28 like miR -0.21 >More info 0.50 >More info WT for miR Original data GEO bulk