4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on 1hr-pH4.5
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List of experiments correlated with "1hr-pH4.5"  Help Download transcriptome of top 30
Score Experiment Correlation from
1hr-pH4.5		 Correlation to
1hr-pH4.5		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 1hr-pH4.5 1.00 >More info 1.00 >More info 1hr-pH6 1hr pH 4.5 roots Original data GEO bulk
2 1h +Pi -0.85 >More info -0.92 >More info 1h -Pi root Original data GEO bulk
3 Whole root - low pH 3H 0.59 >More info 0.82 >More info Whole root - Std pH 3H pH 4.6 for 3 hr Original data GEO bulk
4 Whole root - low pH 30min 0.69 >More info 0.72 >More info Whole root - Std pH 30min pH 4.6 for 30 min Original data GEO bulk
5 Whole root - low pH 1H 0.63 >More info 0.68 >More info Whole root - Std pH 1H pH 4.6 for 1 hr Original data GEO bulk
6 WT Nitrate 0.5h 0.66 >More info 0.59 >More info WT untreated Original data GEO bulk
7 6h +Pi -0.64 >More info -0.48 >More info 6h -Pi root Original data GEO bulk
8 Kas -Fe 24h Roots -0.56 >More info -0.55 >More info Kas +Fe 24h Roots Original data GEO bulk
9 Kas-1 -Fe 24h -0.56 >More info -0.55 >More info Kas-1 +Fe 24h roots Original data GEO bulk
10 inhibitor B Treated 0.50 >More info 0.58 >More info Negative Control Original data GEO bulk
11 ex2 flu dark 8hours/30 minute light 0.45 >More info 0.56 >More info col dark 8hours/30 minute light Original data GEO bulk
12 Leaf wounded 0.47 >More info 0.54 >More info Leaf control vegetative leaf Original data GEO bulk
13 8hr-pH4.5 0.53 >More info 0.47 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
14 Whole root - low pH 6H 0.46 >More info 0.52 >More info Whole root - Std pH 6H pH 4.6 for 6 hr Original data GEO bulk
15 WT 3H Cold 0.39 >More info 0.59 >More info WT control Original data GEO bulk
16 4C 2h(SOIL) 0.45 >More info 0.53 >More info 4C 0h(SOIL) Original data GEO bulk
17 PsJN -0.40 >More info -0.57 >More info Control inoculated with the PGPR bacterial model Burkholderia phytofirmans PsJN Plantlet Original data GEO bulk
18 35S:RPS4 eds1-2 2h -0.43 >More info -0.54 >More info 35S:RPS4 2h leaves Original data
19 inhibitor A Treated 0.50 >More info 0.46 >More info Negative Control Original data GEO bulk
20 Heat shock optimum 0.30 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
21 Col in Pi deficiency medium 0.50 >More info 0.44 >More info Col in control medium root Original data GEO bulk
22 IXB induced 0.43 >More info 0.51 >More info Methanol IXB Suspension cells Original data GEO bulk
23 hira-root -0.55 >More info -0.38 >More info WT-root root Original data
24 rosette Light Wounded 0.52 >More info 0.40 >More info rosette Light Control Original data GEO bulk
25 Roots Cd -0.51 >More info -0.39 >More info Roots control Cd Root Original data GEO bulk
26 Col0 roots 2hr KNO3 nitrogen -0.15 >More info -0.75 >More info Col0 roots 2hr KCl control root Original data GEO bulk
27 myb61 cork 0.33 >More info 0.57 >More info wt cork cork Original data GEO bulk
28 4C 1h 0.33 >More info 0.56 >More info 4C 0h Original data GEO bulk
29 flu dark 8hours/30 minute light 0.35 >More info 0.54 >More info col dark 8hours/30 minute light Original data GEO bulk
30 myb61 xylem 0.38 >More info 0.51 >More info wt xylem xylem Original data GEO bulk
31 bak1-3 +Pep2 2h 0.35 >More info 0.53 >More info WT +Pep2 2h Pep2 Original data GEO bulk
32 rosette Dark Wounded 0.53 >More info 0.34 >More info rosette Dark Control Original data GEO bulk
33 Col-0-1h IAA 0.54 >More info 0.33 >More info Col-0-0h IAA whole plant Original data GEO bulk
34 Col-Luc WT 3h antimycin A 0.50 >More info 0.36 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
35 2hr continuous KNO3 PrR cell 0.28 >More info 0.58 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
36 BI-1-30min IAA 0.51 >More info 0.34 >More info BI-1-0h IAA whole plant Original data GEO bulk
37 root cells stele -Fe 0.50 >More info 0.35 >More info whole roots standard Original data GEO bulk
38 Bur-0-30min IAA 0.50 >More info 0.35 >More info Bur-0h IAA whole plant Original data GEO bulk
39 Col0-PsmES4326-24hpi 0.24 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
40 Split KNO3 roots - 2hours 0.26 >More info 0.59 >More info Split KCl roots - 2hours 5mM KNO3 on ONE side for 2 hours roots Original data GEO bulk
41 vte2 leaves 0h LT -0.27 >More info -0.58 >More info Col leaves 0h LT h 9-11th adult leaves Original data
42 Cocultivation 8 hrs root 0.51 >More info 0.33 >More info Mock cocultivation 8 hrs root Root Original data
43 2hr continuous KNO3 ECR cell 0.32 >More info 0.52 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
44 root protoplasts 40 mM NaCl 0.52 >More info 0.31 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
45 Selenate (root) 0.54 >More info 0.29 >More info Ws (root) Original data GEO bulk
46 Root Selenate 0.54 >More info 0.29 >More info Root control 40 micromolar selenate Root Original data GEO bulk
47 Col-0-30min IAA 0.54 >More info 0.28 >More info Col-0-0h IAA whole plant Original data GEO bulk
48 Imbibed 1 h (seed) 0.24 >More info 0.57 >More info Dry seed Original data Time course of early seed germination
49 seed germinating in countinuous light 24h SL 0.13 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
50 CDB1-Knockout -0.29 >More info -0.50 >More info WT Original data GEO bulk
51 Hydrogen Peroxide 500 uM 0.25 >More info 0.54 >More info Control RB and PER Hydrogen Peroxide Original data
52 Cold Stress 24 h (root) 0.51 >More info 0.27 >More info Stress mock 24 h (root) Original data Stress treatments
53 Leafminer damaged seedlings 0.22 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
54 root cells columella root cap -Fe 0.51 >More info 0.23 >More info whole roots standard Original data GEO bulk
55 Shoot apex inflorescence (after bolting) 0.08 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
56 Col BTH 0.05 >More info 0.67 >More info Col rosettes Original data GEO bulk
57 Laer pretreat GA Flg22 1h 0.00 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
58 line J2731-5 days control + 2 days salt s 0.18 >More info 0.53 >More info line J2731-7 days-control Original data
59 ANOXIA -0.18 >More info -0.51 >More info ANOXIA+SUCROSE Original data GEO bulk
60 Red/FR Light45min 0.09 >More info 0.59 >More info FarRed Light 45min Original data Light treatments
61 Split KNO3 roots - 8hours 0.05 >More info 0.62 >More info Split KCl roots - 8hours 5mM KNO3 on ONE side for 8 hours roots Original data GEO bulk
62 2hr transitory KNO3 ECR cell 0.02 >More info 0.65 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
63 3x(m) 0.06 >More info 0.60 >More info 2x two week old seedlings Original data
64 2hr continuous KNO3 and MSX PeR cell 0.05 >More info 0.60 >More info 2hr continuous KCl and MSX control PeR cell Pericycle root cells Original data GEO bulk
65 chl1-5 Nitrate 0.5h -0.13 >More info -0.51 >More info WT Nitrate 0.5h Original data GEO bulk
66 2hr continuous KNO3 EPR cell 0.12 >More info 0.51 >More info 2hr KCl control EPR cell Endodermis&Pericycle root cells Original data GEO bulk
67 siliques AtHb1 control 0.07 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
68 cat2-2; 8h switch to ambient CO2 concentrations; 0.04 >More info 0.55 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
69 250uM K-nitrate 20min roots 0.07 >More info 0.51 >More info 250uM KCl 20min roots Roots Original data GEO bulk
70 IAA7mII over-expressor IAA Treated -0.11 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
71 bri1-116 -0.18 >More info 0.73 >More info Col seedling Original data GEO bulk
72 CCA1-ox 6am non-polysomal 0.04 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
73 oas-a1.1 root -0.02 >More info -0.52 >More info WT-Untreated Root Original data GEO bulk
74 Ws 2h KNO3 -0.04 >More info 0.54 >More info Ws 2h KCl 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
75 Col 0 2h KNO3 -0.04 >More info 0.52 >More info Col 0 2h KCl 5 mM KNO3 root Original data GEO bulk