4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Roots Cd
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List of experiments correlated with "Roots Cd"  Help Download transcriptome of top 30
Score Experiment Correlation from
Roots Cd		 Correlation to
Roots Cd		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Roots Cd 1.00 >More info 1.00 >More info Roots control Cd Root Original data GEO bulk
2 oas-a1.1 Cd 18h -0.63 >More info -0.70 >More info Cd 18h root Root Original data GEO bulk
3 6h +Pi 0.69 >More info 0.64 >More info 6h -Pi root Original data GEO bulk
4 dorn1-1 Root 100 mM ATP 30 min 0.62 >More info 0.70 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
5 root Dosed gold -0.75 >More info -0.57 >More info root No gold .125 mM gold 24 h roots Original data
6 0.125 mM gold 24 h -0.75 >More info -0.57 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
7 Leaf wounded -0.60 >More info -0.70 >More info Leaf control vegetative leaf Original data GEO bulk
8 Salt Stress 24 h (root) -0.77 >More info -0.51 >More info Stress mock 24 h (root) Original data Stress treatments
9 plant (tga2-5-6) 4h phytoprostane A1 -0.49 >More info -0.78 >More info plant (tga2-5-6) 4h control Original data GEO bulk
10 NJ15 -0.54 >More info -0.72 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
11 seedlings-week-old RECA1-overexpressing
transgenic		 -0.71 >More info -0.55 >More info seedlings-week-old Col-0 seedlings Original data
12 (Ws-2)+100 uM As -0.63 >More info -0.61 >More info (Ws-2)+0 uM As treated with 100 uM As Roots Original data GEO bulk
13 Cocultivation 8 hrs root -0.64 >More info -0.60 >More info Mock cocultivation 8 hrs root Root Original data
14 Nicotinamide-57hr -0.72 >More info -0.52 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
15 Phytoprostane A1 4 h -0.53 >More info -0.70 >More info Col-0 Original data GEO bulk
16 root protoplasts 40 mM NaCl -0.60 >More info -0.62 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
17 P.p 2.5hai -0.59 >More info -0.62 >More info At-Control roots Original data GEO bulk
18 TNT-seedlings -0.36 >More info -0.85 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
19 inhibitor A Treated -0.51 >More info -0.69 >More info Negative Control Original data GEO bulk
20 Osmotic Stress 24 h (root) -0.71 >More info -0.49 >More info Stress mock 24 h (root) Original data Stress treatments
21 IAA/inhibitor A Treated -0.56 >More info -0.63 >More info IAA Treated Original data GEO bulk
22 WT 30μM arsenate 8 hours. -0.56 >More info -0.63 >More info WT control (not supplemented). Original data
23 12m.KCl -0.69 >More info -0.50 >More info To. KCl 14 day old Roots Original data GEO bulk
24 R. solani AG8 -0.58 >More info -0.61 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
25 WT+chitooctaose -0.51 >More info -0.68 >More info WT+water chitooctaose seedlings Original data GEO bulk
26 WT 3H Cold -0.58 >More info -0.60 >More info WT control Original data GEO bulk
27 Selenate (root) -0.45 >More info -0.73 >More info Ws (root) Original data GEO bulk
28 Root Selenate -0.45 >More info -0.73 >More info Root control 40 micromolar selenate Root Original data GEO bulk
29 seedling -S Exp -0.38 >More info -0.79 >More info seedling FN Exp seedling Original data
30 Whole root - low pH 6H -0.65 >More info -0.51 >More info Whole root - Std pH 6H pH 4.6 for 6 hr Original data GEO bulk
31 tfl1-1-16ºC -0.67 >More info -0.49 >More info WT-16ºC Original data GEO bulk
32 SCR-GR Time 1H Dex -0.58 >More info -0.58 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
33 FLIGHT TAGESB plate6 ROOTS -0.44 >More info -0.72 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
34 9 hr Hypoxia 1 hr recovery Total RNA -0.55 >More info -0.60 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
35 Cold Stress 24 h (root) -0.65 >More info -0.50 >More info Stress mock 24 h (root) Original data Stress treatments
36 AgNO3 3 h -0.39 >More info -0.76 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
37 seedling h S Exp 0.39 >More info 0.76 >More info seedling -S Exp seedling Original data
38 pepr1-1 Pepr2-3 +Pep2 10h 0.59 >More info 0.55 >More info WT +Pep2 10h Pep2 Original data GEO bulk
39 root stele 40 mM NaCls -0.58 >More info -0.55 >More info root stele Original data GEO bulk
40 WT chitooctaose -0.51 >More info -0.62 >More info WT water Original data GEO bulk
41 Nicotinamide-81hr -0.63 >More info -0.49 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
42 WT-16ºC 0.59 >More info 0.53 >More info WT-23ºC Original data GEO bulk
43 15m.KCl -0.71 >More info -0.41 >More info To. KCl 14 day old Roots Original data GEO bulk
44 P.p 6hai -0.64 >More info -0.47 >More info At-Control roots Original data GEO bulk
45 bak1-3 +Pep2 10h -0.62 >More info -0.49 >More info WT +Pep2 10h Pep2 Original data GEO bulk
46 Nicotinamide-53hr -0.63 >More info -0.48 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
47 root endodermis -S 0.61 >More info 0.50 >More info root endodermis and quiescent center pH5.7 Original data GEO bulk
48 WT+H2O2 -0.37 >More info -0.74 >More info WT H2O2 Original data GEO bulk
49 P.p 10.5hai -0.62 >More info -0.48 >More info At-Control roots Original data GEO bulk
50 Leaf systemic -0.57 >More info -0.53 >More info Leaf control vegetative leaf Original data GEO bulk
51 TA induced -0.52 >More info -0.58 >More info Methanol TA Suspension cells Original data GEO bulk
52 dicamba -0.58 >More info -0.52 >More info WT mock whole seedling Original data GEO bulk
53 chito-octamer -0.43 >More info -0.67 >More info Col Mock Original data GEO bulk
54 sfr6 drought 0.55 >More info 0.54 >More info WT drought All aerial tissue Original data GEO bulk
55 hira-root 0.52 >More info 0.56 >More info WT-root root Original data
56 coi1-2 -0.42 >More info -0.66 >More info Col-0 mock Whole seedling Original data GEO bulk
57 Te 8h -0.56 >More info -0.51 >More info Te CA Leaves Original data
58 Nicotinamide-61hr -0.64 >More info -0.43 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
59 K starvation (root) -0.63 >More info -0.44 >More info Ws (root) Original data GEO bulk
60 WT AntimycinA 3h -0.59 >More info -0.48 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
61 Nicotinamide-85hr -0.58 >More info -0.48 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
62 low CO2 + light -0.51 >More info -0.55 >More info normal CO2 + light Original data GEO bulk
63 Root -K -0.63 >More info -0.43 >More info Control-root Original data GEO bulk
64 Wounding Stress3 h (shoot) -0.59 >More info -0.47 >More info Stress mock 3 h (shoot) Original data Stress treatments
65 ABA SA 24h -0.46 >More info -0.60 >More info EtOH 24h 24hr Original data GEO bulk
66 P.p 30hai -0.63 >More info -0.42 >More info At-Control roots Original data GEO bulk
67 IXB induced -0.45 >More info -0.60 >More info Methanol IXB Suspension cells Original data GEO bulk
68 (Col-0)+200 uM As -0.40 >More info -0.64 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
69 bHLH122 ox 0.38 >More info 0.66 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
70 max4 hypocotyl -0.49 >More info -0.55 >More info wt hypocotyl hypocotyl Original data GEO bulk
71 Seedling-HeatStressed TOTALmRNA -0.49 >More info -0.54 >More info Seedling-control TOTALmRNA seedling Original data
72 root longitudinal zone-2 low sulfur 0.55 >More info 0.47 >More info root longitudinal zone-2 pH 5.7 Original data GEO bulk
73 Heat and anoxia -0.50 >More info -0.52 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
74 HARAP aerobic 0.33 >More info 0.69 >More info WT aerobic aerobic Original data GEO bulk
75 myb61 cork -0.42 >More info -0.59 >More info wt cork cork Original data GEO bulk
76 3m.KCl -0.59 >More info -0.41 >More info To. KCl 14 day old Roots Original data GEO bulk
77 Nicotinamide-69hr -0.58 >More info -0.42 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
78 safener treated -0.54 >More info -0.46 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
79 9 hr Hypoxia 1 hr recovery IP RNA -0.47 >More info -0.53 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
80 P35S:rGRF1 0.57 >More info 0.42 >More info Col-0 Original data GEO bulk
81 Whole root - low pH 3H -0.53 >More info -0.46 >More info Whole root - Std pH 3H pH 4.6 for 3 hr Original data GEO bulk
82 Nicotinamide-89hr -0.66 >More info -0.33 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
83 -Sulfate 24 h -0.14 >More info -0.85 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
84 Col in Pi deficiency medium -0.28 >More info -0.71 >More info Col in control medium root Original data GEO bulk
85 aba1 hypocotyl -0.34 >More info -0.65 >More info Ler hypocotyl hypocotyl Original data GEO bulk
86 WT drought -0.39 >More info -0.60 >More info WT control All aerial tissue Original data GEO bulk
87 hsfa2 KO 0.64 >More info 0.34 >More info WT (Col-0) whole seedling Original data GEO bulk
88 Root dark control 24h -0.59 >More info -0.39 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
89 root longitudinal zone-1 low sulfur 0.54 >More info 0.44 >More info root longitudinal zone-1 pH 5.7 Original data GEO bulk
90 dorn1-1 Root MES buffer 30 min 0.63 >More info 0.35 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
91 Nicotinamide-73hr -0.61 >More info -0.37 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
92 pepr1-1 Pepr2-3 +Pep2 2h 0.45 >More info 0.53 >More info WT +Pep2 2h Pep2 Original data GEO bulk
93 Rsch 8h -0.43 >More info -0.55 >More info Rsch CA Leaves Original data
94 ein5-1 ski2-3 -0.50 >More info -0.47 >More info Col-0 aerial tissue Original data
95 Nicotinamide-49hr -0.59 >More info -0.38 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
96 17 0h total 0.58 >More info 0.39 >More info 27 0h total whole seedlings floating on MS medium Original data
97 Nicotinamide-65hr -0.64 >More info -0.33 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
98 5-Triiodobenzoic acid3 h -0.24 >More info -0.73 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
99 til1-1 22C -0.39 >More info -0.58 >More info Col-0 22C Original data GEO bulk
100 1h +Pi 0.28 >More info 0.69 >More info 1h -Pi root Original data GEO bulk
101 GA -0.45 >More info -0.52 >More info none GA Rosette Original data GEO bulk
102 AtLysM RLK1 mutant chitooctaose 0.38 >More info 0.59 >More info WT chitooctaose Original data GEO bulk
103 BLM+INA -0.47 >More info -0.50 >More info CK BLM and INA seedling Original data
104 detached inflorescences 24h -0.59 >More info -0.37 >More info detached inflorescences 0h detached dark-held immature inflorescences inflorescences from the primary bolts Original data GEO bulk
105 plant (Col-0) 4h phytoprostane A1 -0.39 >More info -0.57 >More info plant (tga2-5-6) 4h control Original data GEO bulk
106 8hr-pH4.5 -0.39 >More info -0.57 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
107 siliques AtHb1 control 0.44 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
108 Whole root - low pH 30min -0.46 >More info -0.50 >More info Whole root - Std pH 30min pH 4.6 for 30 min Original data GEO bulk
109 Col0 roots 2hr KNO3 nitrogen 0.33 >More info 0.63 >More info Col0 roots 2hr KCl control root Original data GEO bulk
110 Whole root - S 3H -0.27 >More info -0.68 >More info Whole root - S 0H Original data GEO bulk
111 rosette leaves fdh -0.52 >More info -0.43 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
112 Var2-1 roots 2hr KCl control 0.63 >More info 0.32 >More info Col0 roots 2hr KCl control root Original data GEO bulk
113 tor mutant glucose -0.51 >More info -0.44 >More info WT (Col) glucose glucose seedlings Original data GEO bulk
114 bZIP1ko mutant N+Light- -0.43 >More info -0.52 >More info WT-sib N+Light- whole plant Original data GEO bulk
115 35S:RPS4 eds1-2 2h 0.30 >More info 0.65 >More info 35S:RPS4 2h leaves Original data
116 vte2 leaves 48h LT -0.44 >More info -0.51 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
117 Seedling-HeatStressed POLYSOMESmRNA -0.43 >More info -0.51 >More info Seedling-control POLYSOMESmRNA seedling Original data
118 6h volatiles Sp. HRO-C48 -0.56 >More info -0.37 >More info 6h untreated whole seedling Original data GEO bulk
119 WT-Dry -0.26 >More info -0.67 >More info WT-CK dehydration treatment 1h Original data
120 gun4-1 -0.61 >More info -0.32 >More info WT Col-0 seedling Original data GEO bulk
121 Cycloheximide 3 h -0.34 >More info -0.59 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
122 Seedling KUA1-IOX est -0.38 >More info -0.54 >More info Seedling KUA1-IOX mock Original data
123 root hypoxia pPEP -0.50 >More info -0.42 >More info root hypoxia total hypoxia root Original data GEO bulk
124 Root submergence 24h -0.60 >More info -0.32 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
125 root epidermis and lateral root cap -S 0.51 >More info 0.41 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
126 Col-0 low oxygen -0.39 >More info -0.52 >More info Col-0 control low oxygen root Original data GEO bulk
127 Differentiation 36h 0.58 >More info 0.33 >More info Differentiation 0h leaves Original data
128 4h decapitation 0.62 >More info 0.29 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
129 17 2h total 0.56 >More info 0.34 >More info 27 1h total 1.5mM 4SU added at h whole seedlings floating on MS medium Original data
130 Bay-0-30min IAA -0.65 >More info -0.25 >More info Bay-0-0h IAA whole plant Original data GEO bulk
131 whole roots 140 mM NaCl 4 hour -0.50 >More info -0.40 >More info whole roots standard Original data GEO bulk
132 shoot-10 μM DEX- 6 hr -0.52 >More info -0.38 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
133 ISOXABEN 0.51 >More info 0.39 >More info CON 0.1 mM ISOXABEN Original data GEO bulk
134 1hr-pH4.5 -0.39 >More info -0.51 >More info 1hr-pH6 1hr pH 4.5 roots Original data GEO bulk
135 amiRAP aerobic 0.26 >More info 0.64 >More info WT aerobic aerobic Original data GEO bulk
136 WT 90-105 min Xanthomonas -0.37 >More info -0.53 >More info WT T0 Original data GEO bulk
137 4C 1h -0.20 >More info -0.70 >More info 4C 0h Original data GEO bulk
138 oligomycin 1 h -0.33 >More info -0.56 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
139 CMV-WT -0.50 >More info -0.39 >More info Mock-At Aerial tissues Original data GEO bulk
140 Drought Stress 24 h (root) 0.51 >More info 0.38 >More info Stress mock 24 h (root) Original data Stress treatments
141 8-DAC chr11-1chr17-1 -0.51 >More info -0.38 >More info 8-DAC Col-0 leaf explants Original data
142 Shoot apex inflorescence (after bolting) 0.24 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
143 dcl2-1 -0.57 >More info -0.32 >More info Col-0 Original data GEO bulk
144 AFB1 0h -0.59 >More info -0.30 >More info WT 0h Leaf tissue Original data GEO bulk
145 17 2h unlabelled 0.53 >More info 0.35 >More info 27 1h unlabelled 1.5mM 4SU added at h whole seedlings floating on MS medium Original data
146 chito-tetramer -0.21 >More info -0.67 >More info Col Mock Original data GEO bulk
147 npr1 sni1 ssn2 SA 0.53 >More info 0.34 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
148 wnk8-2 untreated 0.34 >More info 0.53 >More info Col-0 untreated seedlings Original data GEO bulk
149 SA -0.32 >More info -0.55 >More info WT mock Whole seedling Original data GEO bulk
150 dark-hs -0.31 >More info -0.56 >More info dark-control seedling Original data
151 dcl3-1 -0.52 >More info -0.35 >More info Col-0 Original data GEO bulk
152 Col-0 C2H4 24h -0.50 >More info -0.37 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
153 edr1 36 h powdery mildew -0.55 >More info -0.31 >More info Col-0 36 h powdery mildew Original data GEO bulk
154 ABA 24h -0.52 >More info -0.34 >More info EtOH 24h 24hr Original data GEO bulk
155 rosette Light Wounded -0.31 >More info -0.55 >More info rosette Light Control Original data GEO bulk
156 myb3 myb3r4d -0.33 >More info -0.53 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
157 gpa1-4/agb1-2 ozone 2d 0.24 >More info 0.62 >More info Col ozone 2d ozone Original data GEO bulk
158 bak1-3 +Pep2 2h -0.28 >More info -0.58 >More info WT +Pep2 2h Pep2 Original data GEO bulk
159 root stele -S 0.51 >More info 0.34 >More info root stele pH5.7 Original data GEO bulk
160 Heat shock optimum 0.20 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
161 QC pSCR(QC pSCRBRI1) 3h BL -0.53 >More info -0.31 >More info QC pSCR(QC pSCRBRI1) 0h BL brassinosteroid root Original data
162 whole roots 140 mM NaCl 30 minutes -0.28 >More info -0.56 >More info whole roots standard Original data GEO bulk
163 Differentiation 24h 0.61 >More info 0.23 >More info Differentiation 0h leaves Original data
164 8h-DC3000 avrRpm1 -0.61 >More info -0.23 >More info 8h-DC3000 leaves Original data GEO bulk
165 Protoplast Induced -0.15 >More info -0.69 >More info Uninduced Original data GEO bulk
166 9m.KCl -0.53 >More info -0.30 >More info To. KCl 14 day old Roots Original data GEO bulk
167 rdr6-15 0.53 >More info 0.30 >More info Col-0 Original data GEO bulk
168 flu -0.23 >More info -0.60 >More info WT Col Original data GEO bulk
169 Laer pretreat GA Flg22 1h 0.12 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
170 sim smr1 0.25 >More info 0.58 >More info WT seedling Original data GEO bulk
171 OE-HRA1 2HS  -0.54 >More info -0.28 >More info Col-0 2HS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
172 15m.KNO3 -0.51 >More info -0.31 >More info To. KNO3 14 day old Roots Original data GEO bulk
173 Apex mir-3TCP 14DAS 0.56 >More info 0.26 >More info Apex Col 14DAS Original data GEO bulk
174 flu over-tAPX -0.27 >More info -0.55 >More info WT Col Original data GEO bulk
175 IPT8 mutant tZ 12h -0.61 >More info -0.21 >More info Control 12h 12 hours primary root tip (5 mm) Original data GEO bulk
176 4C 2h(SOIL) -0.23 >More info -0.59 >More info 4C 0h(SOIL) Original data GEO bulk
177 ATR1 OE -0.52 >More info -0.29 >More info WT for ATR1/MYB51 Original data GEO bulk
178 Mutant axr3-1 (IAA) -0.14 >More info -0.67 >More info Col (IAA) Original data GEO bulk
179 npr1-3 MOCK 48h 0.20 >More info 0.61 >More info Col-0 MOCK 48h Original data GEO bulk
180 (Col-0)+100 uM As -0.16 >More info -0.65 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
181 AAF-OX -0.50 >More info -0.30 >More info Col-0 Rosette leaf Original data GEO bulk
182 Kas2 roots 2hr KCl control 0.53 >More info 0.27 >More info Col0 roots 2hr KCl control root Original data GEO bulk
183 Nicotinamide-93hr -0.56 >More info -0.23 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
184 Differentiation 48h 0.50 >More info 0.29 >More info Differentiation 0h leaves Original data
185 Mutant arf2 (etiol) -0.29 >More info -0.50 >More info Col (etiol) Original data GEO bulk
186 arf2 mock -0.29 >More info -0.50 >More info Col mock Original data GEO bulk
187 CDB1-Knockout 0.10 >More info 0.69 >More info WT Original data GEO bulk
188 siliques AtHb1 hypoxia 0.53 >More info 0.25 >More info siliques WT hypoxia hypoxia silique Original data GEO bulk
189 WT (Col) glucose 0.50 >More info 0.28 >More info WT (Col) glucose seedlings Original data GEO bulk
190 250uM K-nitrate 20min roots 0.51 >More info 0.27 >More info 250uM KCl 20min roots Roots Original data GEO bulk
191 Sha-30min IAA -0.52 >More info -0.26 >More info Sha-0h IAA whole plant Original data GEO bulk
192 24h +Pi 0.21 >More info 0.57 >More info 24h -Pi root Original data GEO bulk
193 gai MeJA 1h 0.50 >More info 0.27 >More info Laer MeJA 1h leaf discs Original data GEO bulk
194 P.syringae AvrRpt2 4 h (leaf) -0.27 >More info -0.50 >More info Mock 4 h (leaf) Original data Elicitor treatments
195 Col-0 37C -0.27 >More info -0.50 >More info Col-0 22C Original data GEO bulk
196 IAA/inhibitor B Treated -0.10 >More info -0.67 >More info IAA Treated Original data GEO bulk
197 Anoxia -0.22 >More info -0.55 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
198 bri1-116 0.04 >More info 0.73 >More info Col seedling Original data GEO bulk
199 R. solani AG2-1 -0.25 >More info -0.52 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
200 Col ozone 3h -0.15 >More info -0.62 >More info Col clean-air 3h ozone Original data GEO bulk
201 A. thaliana-A. lyrata hybrid 0.27 >More info 0.50 >More info A. thaliana mature leaves before flowering Original data GEO bulk
202 spch -0.55 >More info -0.21 >More info Col-0 WT whole seedling Original data GEO bulk
203 abi1 hypocotyl -0.08 >More info -0.68 >More info Ler hypocotyl hypocotyl Original data GEO bulk
204 seedling 24h after HZE WT -0.53 >More info -0.22 >More info seedling day 2 unirradiated WT 24h Original data
205 npr1 sni1 ssn2 0.54 >More info 0.21 >More info npr1 sni1 water water seedling Original data GEO bulk
206 Col -Fe -0.52 >More info -0.22 >More info Col-es root Original data GEO bulk
207 wnk8-1 untreated 0.17 >More info 0.57 >More info Col-0 untreated seedlings Original data GEO bulk
208 pXVE:HA-EDM2-a untreated 0.14 >More info 0.60 >More info Col-0 untreated seedlings Original data GEO bulk
209 WT seedlings MV -0.24 >More info -0.50 >More info WT seedlings control Seedlings Original data GEO bulk
210 WT 3h -P -0.08 >More info -0.65 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
211 ani1 T0.5 0.18 >More info 0.55 >More info WT T0.5 root tissue Original data GEO bulk
212 WT (Col-0) inflorescence drought day 5 -0.52 >More info -0.20 >More info WT (Col-0) inflorescence well-watered day 5 Unopen flower buds Original data GEO bulk
213 FLIGHT TAGES 2B plate6 HYPOCOTYLS -0.50 >More info -0.22 >More info GROUND CONTROL TAGES 2B plate6 HYPOCOTYLS plant tissue Original data
214 inhibitor B Treated -0.09 >More info -0.63 >More info Negative Control Original data GEO bulk
215 CCA1-ox 6am non-polysomal 0.21 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
216 Uniconazole 12 h -0.55 >More info -0.16 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
217 root - 08% oxygen - 48h 0.15 >More info 0.56 >More info root - 21% oxygen - 48h Original data GEO bulk
218 pip3 At2g19270 RNAi 24 -0.53 >More info -0.18 >More info Nd-1 whole plant Original data GEO bulk
219 Col 8h -0.20 >More info -0.51 >More info Col CA Leaves Original data
220 CeO2 germinant 0.06 >More info 0.65 >More info Millipore Water germinant CeO2 seedling Original data
221 root callus inducing medium 96 h 0.53 >More info 0.17 >More info root callus inducing medium 0 h 96 hours after incubating on callus inducing medium root explants Original data GEO bulk
222 Col BTH 0.03 >More info 0.67 >More info Col rosettes Original data GEO bulk
223 CMV-A2b mutant -0.51 >More info -0.19 >More info Mock-At Aerial tissues Original data GEO bulk
224 Col-7 Sucrose 0.54 >More info 0.15 >More info col-7 Original data GEO bulk
225 tcp14 -0.54 >More info -0.15 >More info WT inflorescences Original data GEO bulk
226 toc1-1-65hr -0.17 >More info -0.52 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
227 cngc4 -0.51 >More info -0.18 >More info Ws-2 Seedlings Original data GEO bulk
228 Root submergence 7h -0.54 >More info -0.14 >More info Root light control 7 h submergence in darkness whole root Original data GEO bulk
229 Root P recovery -0.58 >More info -0.10 >More info Root -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
230 ANOXIA 0.07 >More info 0.61 >More info ANOXIA+SUCROSE Original data GEO bulk
231 npr1 sni1 brca2a SA 0.10 >More info 0.57 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
232 pap1-D -0.50 >More info -0.16 >More info Col-0 aerial part Original data
233 WR 35S 3h BL -0.62 >More info -0.04 >More info WR 35S 0h BL brassinosteroid root Original data
234 rdr6-15 0.11 >More info 0.55 >More info Col-0 plant inflorescence Original data
235 IAA7mII over-expressor IAA Treated -0.03 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
236 toc1-1-53hr -0.06 >More info -0.60 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
237 Flagellin 4 h (leaf) -0.15 >More info -0.50 >More info Mock 4 h (leaf) Original data Elicitor treatments
238 sid2-1 warm 0.15 >More info 0.50 >More info WT warm entire aerial part Original data GEO bulk
239 DMTU 0.54 >More info 0.10 >More info control Original data GEO bulk
240 sfr6 control 0.56 >More info 0.08 >More info WT control All aerial tissue Original data GEO bulk
241 seed germinating in countinuous light 24h SL -0.03 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
242 seedlings protease IV -0.10 >More info -0.54 >More info seedlings nontreated control whole seedling Original data
243 root longitudinal zone-4 NaCl -0.08 >More info -0.55 >More info root longitudinal zone-4 Original data GEO bulk
244 Mutant arf19-1 0.06 >More info 0.57 >More info Col Original data GEO bulk
245 phyB Rc50 -0.54 >More info -0.08 >More info WT(Ler) Rc50 Original data GEO bulk
246 OsSAP11 expressing 0.09 >More info 0.53 >More info WT seedlings Original data GEO bulk
247 Ws HS -0.06 >More info -0.55 >More info Ws control heat shocked seedling Original data GEO bulk
248 gun1gun5 far-red pretreated 0.06 >More info 0.55 >More info WT far-red pretreated Original data GEO bulk
249 08h Col-0 0.53 >More info 0.08 >More info 00h Col-0 Original data GEO bulk
250 tunicamycin 0.11 >More info 0.50 >More info DMF Original data GEO bulk
251 IPT8 induced 12h -0.61 >More info 0.02 >More info Control 12h 12 hours primary root tip (5 mm) Original data GEO bulk
252 C58 6dpi 0.51 >More info 0.07 >More info Reference 6dpi wounded inflorescence stalk segments Original data GEO bulk
253 nd-1 V. longisporum-inoculated 48 hpi -0.50 >More info -0.08 >More info Col-0 V. longisporum-inoculated 48 hpi Pool of >50 individual roots Original data
254 Nuclear GSH3 0.52 >More info 0.05 >More info Cytoplasmic GSH3 Media change Original data GEO bulk
255 seedling 30 min S Exp -0.50 >More info -0.07 >More info seedling -S Exp seedling Original data
256 Rose Bengal 0.5 uM 0.04 >More info -0.61 >More info Control RB and PER Rose Bengal Original data
257 LTN005-2 TSA 0.51 >More info 0.04 >More info LTN012-2 Mock Original data
258 GST-overexpression seedlings control -0.53 >More info -0.02 >More info WT seedlings control Seedlings Original data
259 WT flg22 2h -0.03 >More info -0.52 >More info WT 0h Leaf tissue Original data GEO bulk
260 TaFLS overexpression line (OE1) 0.54 >More info 0.00 >More info Col-0 Rosette leaves Original data
261 Red/FR Light45min 0.30 >More info -0.84 >More info FarRed Light 45min Original data Light treatments
262 mpk6-ko Flg22 4h 0.01 >More info -0.55 >More info mpk6-ko H2O 4h Original data GEO bulk
263 Chemically 0.16 >More info -0.70 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
264 flu dark 8hours/30 minute light 0.13 >More info -0.66 >More info col dark 8hours/30 minute light Original data GEO bulk
265 PRR5-VP 18h light on 0.50 >More info 0.02 >More info WT 18h light on whole plant Original data GEO bulk
266 ex2 flu dark 8hours/30 minute light 0.19 >More info -0.70 >More info col dark 8hours/30 minute light Original data GEO bulk
267 ein2 mutant roots mock 0.51 >More info -0.02 >More info roots mock Original data GEO bulk
268 toc1-1-85hr 0.13 >More info -0.62 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
269 GV3101 6dpi 0.52 >More info -0.05 >More info Reference 6dpi wounded inflorescence stalk segments Original data GEO bulk
270 opr3 OPDA 0.5 h 0.20 >More info -0.66 >More info opr3 0 h Original data GEO bulk
271 Inflorescence miR-NGA 0.54 >More info -0.11 >More info Inflorescence wt Original data GEO bulk
272 root - 04% oxygen - 2h -0.08 >More info 0.51 >More info root - 21% oxygen - 2h Original data GEO bulk
273 Col-0 HS 0.20 >More info -0.62 >More info Col-0 control heat shocked seedling Original data GEO bulk
274 WT (Col-0) heat shock 0.20 >More info -0.62 >More info WT (Col-0) whole seedling Original data GEO bulk
275 desiccated mature pollen grains -0.23 >More info 0.64 >More info hydrated pollen grains Original data GEO bulk
276 estradiole-induced ANAC059 0.18 >More info -0.58 >More info transgenic (empty vector inducible system) Original data GEO bulk
277 Kas-1 -Fe 24h -0.18 >More info 0.56 >More info Kas-1 +Fe 24h roots Original data GEO bulk
278 Kas -Fe 24h Roots -0.18 >More info 0.56 >More info Kas +Fe 24h Roots Original data GEO bulk
279 miR396b overexpressor -0.51 >More info 0.13 >More info Col-0 vegetative apices together with the leaf primordia Original data
280 WT Nitrate 0.5h -0.53 >More info 0.16 >More info WT untreated Original data GEO bulk
281 NFA8 roots 2hr KCl control 0.52 >More info -0.15 >More info Col0 roots 2hr KCl control root Original data GEO bulk
282 FarRed Light 45min -0.31 >More info 0.67 >More info White Light 45min Original data Light treatments
283 Col-0 RNAi-MBS2/mbs1-1 HL 3h -0.21 >More info 0.57 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
284 3x(m) 0.25 >More info -0.61 >More info 2x two week old seedlings Original data
285 agb1 gpa1 -ABA GC -0.20 >More info 0.53 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
286 A2hsfa1-ox in quadruple mutant 0.57 >More info -0.24 >More info hsfa1 quadruple mutant whole seedling Original data GEO bulk
287 Oxidative Stress 3 h (root) -0.17 >More info 0.50 >More info Stress mock 3 h (root) Original data Stress treatments
288 Leafminer damaged seedlings -0.26 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
289 6xX2x interploidy cross -0.51 >More info 0.23 >More info 2xX2x cross Original data GEO bulk
290 root - 08% oxygen - 2h -0.22 >More info 0.50 >More info root - 21% oxygen - 2h Original data GEO bulk
291 Col0-PsmES4326-24hpi -0.38 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
292 upb1-1 elongation zone -0.34 >More info 0.54 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
293 Split KNO3 roots - 8hours -0.42 >More info 0.52 >More info Split KCl roots - 8hours 5mM KNO3 on ONE side for 8 hours roots Original data GEO bulk