4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Nicotinamide-65hr
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List of experiments correlated with "Nicotinamide-65hr"  Help Download transcriptome of top 30
Score Experiment Correlation from
Nicotinamide-65hr		 Correlation to
Nicotinamide-65hr		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Nicotinamide-65hr 1.00 >More info 1.00 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
2 Nicotinamide-89hr 0.92 >More info 0.94 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
3 Nicotinamide-69hr 0.92 >More info 0.94 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
4 Nicotinamide-61hr 0.92 >More info 0.92 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
5 Nicotinamide-93hr 0.89 >More info 0.93 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
6 Nicotinamide-85hr 0.88 >More info 0.89 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
7 Nicotinamide-73hr 0.86 >More info 0.90 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
8 Nicotinamide-81hr 0.87 >More info 0.88 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
9 Nicotinamide-57hr 0.86 >More info 0.88 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
10 Nicotinamide-53hr 0.81 >More info 0.84 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
11 Nicotinamide-49hr 0.82 >More info 0.81 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
12 Nicotinamide-77hr 0.76 >More info 0.83 >More info WT-untreated-77hr nicotinamide aerial tissue Original data GEO bulk
13 spch 0.73 >More info 0.73 >More info Col-0 WT whole seedling Original data GEO bulk
14 TNT-seedlings 0.56 >More info 0.84 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
15 low CO2 + dark 0.63 >More info 0.75 >More info normal CO2 + light Original data GEO bulk
16 low CO2 + light 0.64 >More info 0.73 >More info normal CO2 + light Original data GEO bulk
17 detached inflorescences 24h 0.61 >More info 0.75 >More info detached inflorescences 0h detached dark-held immature inflorescences inflorescences from the primary bolts Original data GEO bulk
18 toc1-1-65hr 0.66 >More info 0.68 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
19 WT (Col) glucose -0.60 >More info -0.71 >More info WT (Col) glucose seedlings Original data GEO bulk
20 toc1-1-93hr 0.59 >More info 0.72 >More info WT-untreated-93hr none seedlings aerial tissue Original data GEO bulk
21 toc1-1-69hr 0.64 >More info 0.66 >More info WT-untreated-69hr none seedlings aerial tissue Original data GEO bulk
22 efr-1 +elf18 10h -0.63 >More info -0.67 >More info WT +elf18 10h elf18 Original data GEO bulk
23 Shoot submergence 24h 0.61 >More info 0.69 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
24 E.coli TUV86 2 fliC 7h 0.56 >More info 0.73 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
25 dde2-2 9 hpi A. brassicicola 0.57 >More info 0.72 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
26 CMP 4hr 0.61 >More info 0.68 >More info Acetone 4hr root Original data GEO bulk
27 4d red light grown hmr-5 seedlings 0.62 >More info 0.67 >More info 4d red light grown WT(Col-0) seedlings Original data
28 GST 4 h (leaf) 0.52 >More info 0.77 >More info Mock 4 h (leaf) Original data Elicitor treatments
29 SA 4mM 0.47 >More info 0.82 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
30 toc1-1-53hr 0.54 >More info 0.74 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
31 col-5 hrpA 12h 0.57 >More info 0.71 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
32 exo70A1 0.68 >More info 0.59 >More info Col-0 whole plant Original data GEO bulk
33 gun5 norflurazon 0.62 >More info 0.65 >More info gun5 control Original data GEO bulk
34 Col-0 C2H4 24h 0.59 >More info 0.68 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
35 Col-0 under 4 days salt 0.60 >More info 0.66 >More info Col-0 under control 4 days salt treatment rosette Original data
36 E.coli 0157 H7 7h 0.54 >More info 0.72 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
37 Col-0 9 hpi A. brassicicola 0.58 >More info 0.68 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
38 Laer treat paclobutrazol (PAC) 0.58 >More info 0.68 >More info Laer Control leaf discs Original data GEO bulk
39 IMI 4mM 0.57 >More info 0.69 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
40 hrpA 7h 0.55 >More info 0.70 >More info Mock 7h hrpA Original data GEO bulk
41 CMP 24hr 0.61 >More info 0.64 >More info Acetone 24hr root Original data GEO bulk
42 coi1-2 0.61 >More info 0.63 >More info Col-0 mock Whole seedling Original data GEO bulk
43 anac017-2 AntimycinA 3h -0.58 >More info -0.66 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
44 GST NPP1 4 h (leaf) 0.52 >More info 0.71 >More info Mock 4 h (leaf) Original data Elicitor treatments
45 bak1-3 +Pep2 10h 0.56 >More info 0.67 >More info WT +Pep2 10h Pep2 Original data GEO bulk
46 Seedling KUA1-IOX est 0.56 >More info 0.66 >More info Seedling KUA1-IOX mock Original data
47 Shoot dark control 24h 0.57 >More info 0.65 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
48 pepr1-1 Pepr2-3 +Pep2 2h -0.57 >More info -0.65 >More info WT +Pep2 2h Pep2 Original data GEO bulk
49 Lipopolysaccaride4 h (leaf) 0.51 >More info 0.71 >More info Mock 4 h (leaf) Original data Elicitor treatments
50 seedling 1.5h after HZE atm-1 0.60 >More info 0.61 >More info seedling day 1 unirradiated atm-1 1.5h Original data
51 hrpA fliC 7h 0.50 >More info 0.71 >More info Mock 7h hrpA fliC Original data GEO bulk
52 Flagellin 4 h (leaf) 0.50 >More info 0.71 >More info Mock 4 h (leaf) Original data Elicitor treatments
53 DFPM 0.54 >More info 0.67 >More info control Original data GEO bulk
54 WT 2-4h Xanthomonas 0.47 >More info 0.74 >More info WT T0 Original data GEO bulk
55 col-5 DC3000 12h 0.54 >More info 0.66 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
56 AgNO3 3 h 0.51 >More info 0.69 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
57 sfr6 control -0.68 >More info -0.51 >More info WT control All aerial tissue Original data GEO bulk
58 npr1 sni1 ssn2 SA -0.55 >More info -0.63 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
59 gun4-1 0.51 >More info 0.67 >More info WT Col-0 seedling Original data GEO bulk
60 WT AntimycinA 3h 0.53 >More info 0.65 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
61 6h +Pi -0.55 >More info -0.63 >More info 6h -Pi root Original data GEO bulk
62 SCR-GR Time 1H Dex 0.46 >More info 0.72 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
63 1 h Light Total RNA -0.46 >More info -0.72 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
64 +1.6 mM Tween 20 1 h. 0.49 >More info 0.69 >More info +distilled water 1 h. Original data GEO bulk
65 gun1-9 norflurazon 0.59 >More info 0.58 >More info gun1-9 control Original data GEO bulk
66 GO5; 8h switch to ambient CO2 concentrations; 0.50 >More info 0.67 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
67 WT hypoxia 0.55 >More info 0.61 >More info WT normoxia whole rosette Original data
68 4h decapitation -0.39 >More info -0.77 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
69 gabaculin 0.59 >More info 0.57 >More info WT Col-0 seedling Original data GEO bulk
70 35S::MBF1c 0.51 >More info 0.64 >More info control Original data GEO bulk
71 seedling 1.5h after HZE WT 0.58 >More info 0.57 >More info seedling day 1 unirradiated WT 1.5h Original data
72 mkk1/mkk2 24h BTH rep 0.53 >More info 0.62 >More info Col-0 24h BTH rep Original data GEO bulk
73 Phytoprostane A1 4 h 0.54 >More info 0.60 >More info Col-0 Original data GEO bulk
74 shoots bhlh100/101 0uM Fe 0.56 >More info 0.58 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
75 rosette leaves fdh 0.47 >More info 0.67 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
76 toc1-1-73hr 0.45 >More info 0.68 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
77 20h Col-0 -0.45 >More info -0.68 >More info 00h Col-0 Original data GEO bulk
78 CMV-WT 0.52 >More info 0.61 >More info Mock-At Aerial tissues Original data GEO bulk
79 Root dark control 24h 0.53 >More info 0.60 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
80 CAX1/CAX3 mutant 0.61 >More info 0.52 >More info Col whole plant Original data GEO bulk
81 seedlings-week-old RECA1-overexpressing
transgenic		 0.51 >More info 0.62 >More info seedlings-week-old Col-0 seedlings Original data
82 Col0-PsmES4326-24hpi 0.52 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
83 RGA-GR-DEX 0.43 >More info 0.70 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
84 Shoot dark control 7h 0.52 >More info 0.60 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
85 Dark 3day ivd 0.55 >More info 0.57 >More info 0h ivd Original data
86 cngc4 0.51 >More info 0.61 >More info Ws-2 Seedlings Original data GEO bulk
87 til1-1 22C 0.44 >More info 0.68 >More info Col-0 22C Original data GEO bulk
88 pad4-PsmES4326-24hpi -0.49 >More info -0.63 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
89 Col ozone 3h 0.44 >More info 0.68 >More info Col clean-air 3h ozone Original data GEO bulk
90 tor mutant glucose 0.55 >More info 0.56 >More info WT (Col) glucose glucose seedlings Original data GEO bulk
91 Col BTH 0.44 >More info 0.67 >More info Col rosettes Original data GEO bulk
92 msh1 stunt 0.50 >More info 0.61 >More info WT Col-0 above ground part of plant Original data GEO bulk
93 Root submergence 24h 0.53 >More info 0.58 >More info Root light control 24 h submergence in darkness whole root Original data GEO bulk
94 35S:RPS4 eds1-2 8h -0.52 >More info -0.59 >More info 35S:RPS4 8h leaves Original data
95 flu dark 8hours/30 minute light 0.41 >More info 0.70 >More info col dark 8hours/30 minute light Original data GEO bulk
96 ataf1-1 mutant Col-0 Bgh inoculated 0.49 >More info 0.62 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
97 Col-0-avrB-6h 0.47 >More info 0.64 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
98 AFB1 0h 0.53 >More info 0.57 >More info Col 0h Leaf Original data GEO bulk
99 oligomycin 4 h 0.51 >More info 0.59 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
100 Fenclorim 4hr 0.51 >More info 0.59 >More info Acetone 4hr root Original data GEO bulk
101 Uniconazole 12 h 0.51 >More info 0.59 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
102 dor drought 0.49 >More info 0.61 >More info WT drought Original data GEO bulk
103 HopZ1a treated ulp1c ulp1d 0.49 >More info 0.61 >More info col Original data GEO bulk
104 Sulfometuron EC50 0.46 >More info 0.64 >More info Carrier Original data GEO bulk
105 P.p 2.5hai 0.53 >More info 0.56 >More info At-Control roots Original data GEO bulk
106 hrcC 0.45 >More info 0.64 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
107 1 h Light IP RNA -0.41 >More info -0.68 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
108 UV 0.50 >More info 0.59 >More info WT aerial region Original data GEO bulk
109 toc1-1-61hr 0.36 >More info 0.73 >More info WT-untreated-61hr none seedlings aerial tissue Original data GEO bulk
110 HopZ1a treated 0.48 >More info 0.61 >More info col Original data GEO bulk
111 Chitosan 3h Treatment 0.54 >More info 0.54 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
112 sex1-3 0.39 >More info 0.69 >More info Col-WT leaves Original data GEO bulk
113 safener treated 0.47 >More info 0.61 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
114 8h-DC3000 avrRpm1 0.55 >More info 0.52 >More info 8h-DC3000 leaves Original data GEO bulk
115 ORS1 induced 0.42 >More info 0.65 >More info mock-induced rosette leaves Original data GEO bulk
116 toc1-1-49hr 0.60 >More info 0.47 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
117 leaf blade in D 0.49 >More info 0.58 >More info leaf blade in WL leaf blades Original data GEO bulk
118 LTN008-2 aza-dc 0.57 >More info 0.49 >More info LTN012-2 Mock Original data
119 plant (tga2-5-6) 4h phytoprostane A1 0.48 >More info 0.58 >More info plant (tga2-5-6) 4h control Original data GEO bulk
120 Col-0 low oxygen 0.47 >More info 0.59 >More info Col-0 control low oxygen root Original data GEO bulk
121 Col-0 SA 0.48 >More info 0.58 >More info Col-0 Original data GEO bulk
122 35S:RPS4 eds1-2 24h -0.48 >More info -0.58 >More info 35S:RPS4 24h leaves Original data
123 pepr1-1 Pepr2-3 +Pep2 10h -0.54 >More info -0.51 >More info WT +Pep2 10h Pep2 Original data GEO bulk
124 UV Stress 24 h (shoot) 0.54 >More info 0.51 >More info Stress mock 24 h (shoot) Original data Stress treatments
125 OE WRKY63.3 high light 0.52 >More info 0.53 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
126 flu 0.44 >More info 0.61 >More info WT Col Original data GEO bulk
127 pip3 At2g19270 TDNA 9 0.45 >More info 0.60 >More info Col-0 whole plant Original data GEO bulk
128 WT 3H Cold 0.41 >More info 0.64 >More info WT control Original data GEO bulk
129 WT+H2O2 0.45 >More info 0.60 >More info WT H2O2 Original data GEO bulk
130 ein2-1 9 hpi A. brassicicola 0.49 >More info 0.56 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
131 pnp1-1 3h +P 0.47 >More info 0.58 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
132 Total RNA csp1 cold 0.48 >More info 0.57 >More info Total RNA csp1 12h cold (4C) rosettes Original data GEO bulk
133 edr1 36 h powdery mildew 0.54 >More info 0.50 >More info Col-0 36 h powdery mildew Original data GEO bulk
134 Cocultivation 8 hrs root 0.50 >More info 0.54 >More info Mock cocultivation 8 hrs root Root Original data
135 Laer Alternaria 3dpi -0.43 >More info -0.61 >More info Laer Control leaf discs Original data GEO bulk
136 ulp1c ulp1d +Pto 0.49 >More info 0.55 >More info ulp1c ulp1d mock Original data GEO bulk
137 atmyc2 cop1 Seedling BL 0.41 >More info 0.63 >More info WT Seedling BL Original data GEO bulk
138 A. thaliana-A. lyrata hybrid -0.38 >More info -0.66 >More info A. thaliana mature leaves before flowering Original data GEO bulk
139 Col-0 flu HL 3h 0.56 >More info 0.47 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
140 Dark 6h ivd 0.55 >More info 0.48 >More info 0h ivd Original data
141 flu over-tAPX 0.40 >More info 0.63 >More info WT Col Original data GEO bulk
142 Col-0 norflurazon 0.44 >More info 0.59 >More info Col-0 control Original data GEO bulk
143 ice1 6H Cold 0.45 >More info 0.58 >More info WT 6H Cold Original data GEO bulk
144 Col-Luc WT 3h antimycin A 0.45 >More info 0.58 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
145 ein2-1 +Pep2 2h -0.44 >More info -0.59 >More info WT +Pep2 2h Pep2 Original data GEO bulk
146 cpr5npr1 0.44 >More info 0.59 >More info WT(COL) Original data GEO bulk
147 Leafminer damaged seedlings 0.47 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
148 sid2-2 9 hpi A. brassicicola 0.49 >More info 0.54 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
149 shoots WT 0uM Fe 0.61 >More info 0.41 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
150 Fenclorim 24hr 0.45 >More info 0.57 >More info Acetone 24hr root Original data GEO bulk
151 root columella root cap pH4.6 0.48 >More info 0.54 >More info root columella root cap pH5.7 Original data GEO bulk
152 high-R:FR bud axillary -0.42 >More info -0.60 >More info low-R:FR bud axillary high R rosette axillary bud n-2 Original data GEO bulk
153 xyl-grown cell culture- 1h 1mM Fru -0.30 >More info -0.72 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
154 CeO2 germinant -0.39 >More info -0.63 >More info Millipore Water germinant CeO2 seedling Original data
155 shoot-10 μM DEX- 6 hr 0.45 >More info 0.57 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
156 8-DAC chr11-1chr17-1 0.50 >More info 0.51 >More info 8-DAC Col-0 leaf explants Original data
157 Col-0 Flg22 4h 0.35 >More info 0.66 >More info Col-0 H2O 4h Original data GEO bulk
158 rosette leaves lcr 0.49 >More info 0.52 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
159 petiole in FRD 0.49 >More info 0.52 >More info petiole in WL petioles Original data GEO bulk
160 leaf blade in FRD 0.47 >More info 0.54 >More info leaf blade in WL leaf blades Original data GEO bulk
161 toc1-1-85hr 0.24 >More info 0.77 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
162 Whole root - low pH 12H 0.45 >More info 0.56 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
163 roots bhlh100/101 0uM Fe 0.48 >More info 0.53 >More info roots WT 0uM Fe 0uM Fe roots Original data GEO bulk
164 del1-1 mutant 5d uninfected 0.42 >More info 0.59 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
165 phyB Rc50 0.56 >More info 0.44 >More info WT(Ler) Rc50 Original data GEO bulk
166 ABA DFPM 0.51 >More info 0.49 >More info control Original data GEO bulk
167 ARR22-ox (t-zeatin 3 h) 0.47 >More info 0.53 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
168 Protoplast Induced 0.34 >More info 0.66 >More info Uninduced Original data GEO bulk
169 8hr-pH4.5 0.48 >More info 0.52 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
170 WT 30μM arsenate 8 hours. 0.48 >More info 0.52 >More info WT control (not supplemented). Original data
171 seedlings protease IV 0.41 >More info 0.59 >More info seedlings nontreated control whole seedling Original data
172 tfl1-1-23ºC 0.52 >More info 0.47 >More info WT-23ºC Original data GEO bulk
173 gai Control 0.48 >More info 0.51 >More info Laer Control leaf discs Original data GEO bulk
174 cpr5scv1 0.48 >More info 0.51 >More info WT(COL) Original data GEO bulk
175 cpr5 0.45 >More info 0.54 >More info WT(COL) Original data GEO bulk
176 A2hsfa1-ox in quadruple mutant -0.57 >More info -0.41 >More info hsfa1 quadruple mutant whole seedling Original data GEO bulk
177 P.p 6hai 0.53 >More info 0.45 >More info At-Control roots Original data GEO bulk
178 pif4pif5 mut 1h FR -0.51 >More info -0.47 >More info WT 1h FR Original data GEO bulk
179 Propiconazole 12 h 0.46 >More info 0.52 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
180 Norflurazon 0.42 >More info 0.56 >More info Col-0 Original data GEO bulk
181 Heat and anoxia 0.45 >More info 0.53 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
182 WT-NOCO2 INFECTED 0.43 >More info 0.55 >More info WT-MOCK Original data GEO bulk
183 Root dark control 7h 0.46 >More info 0.52 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
184 msg2-BR -0.39 >More info -0.59 >More info BR BR dark-grown seedlings Original data GEO bulk
185 oligomycin 1 h 0.36 >More info 0.62 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
186 Norflurazon 0.42 >More info 0.56 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
187 Col-7 Sucrose -0.45 >More info -0.53 >More info col-7 Original data GEO bulk
188 sni1 0.37 >More info 0.61 >More info WT Original data GEO bulk
189 Leafminer locally damaged thaliana seedlings 0.47 >More info 0.51 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
190 Seedling-HeatStressed TOTALmRNA 0.43 >More info 0.55 >More info Seedling-control TOTALmRNA seedling Original data
191 WT Bc inoculation 14h 0.53 >More info 0.44 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
192 Mutant siz1-3 (Drought) 0.50 >More info 0.47 >More info Col-0 (Drought) Original data GEO bulk
193 siz1-3 drought 0.50 >More info 0.47 >More info Col-0 drought Original data GEO bulk
194 Phaseolicola 2 h (leaf) 0.43 >More info 0.54 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
195 Col whole leaf 5dpi 0.36 >More info 0.61 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
196 IAA/inhibitor A Treated 0.45 >More info 0.52 >More info IAA Treated Original data GEO bulk
197 elf3-7-16ºC -0.47 >More info -0.50 >More info WT-16ºC Original data GEO bulk
198 M6PR transgenic leaf 0mM NaCl 0.33 >More info 0.64 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
199 Roots Cd -0.33 >More info -0.64 >More info Roots control Cd Root Original data GEO bulk
200 Root submergence 7h 0.47 >More info 0.50 >More info Root light control 7 h submergence in darkness whole root Original data GEO bulk
201 24h light (+Lincomycin) 0.40 >More info 0.57 >More info 24h light (-Lincomycin) seedlings Original data GEO bulk
202 12h Col-0 -0.44 >More info -0.53 >More info 00h Col-0 Original data GEO bulk
203 Col ozone 2d 0.45 >More info 0.52 >More info Col clean-air 2d ozone Original data GEO bulk
204 Triazolopyrimidine EC50 0.41 >More info 0.56 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
205 cop1 Seedling BL 0.47 >More info 0.50 >More info WT Seedling BL Original data GEO bulk
206 aox1a(line) MLD stressed 0.43 >More info 0.54 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
207 atmospheric CO2 low Mg shoot 0.52 >More info 0.44 >More info atmospheric CO2 normal Mg shoot Shoot Original data
208 5-Triiodobenzoic acid3 h 0.38 >More info 0.58 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
209 bZIP1ko mutant N+Light- 0.14 >More info 0.82 >More info WT-sib N+Light- whole plant Original data GEO bulk
210 sicy-192 gun1-101 cotyledons 0.42 >More info 0.54 >More info WT cotyledons cotyledons Original data
211 hira-root -0.41 >More info -0.55 >More info WT-root root Original data
212 seedling 12h after HZE atm-1 -0.45 >More info -0.51 >More info seedling day 1 unirradiated atm-1 12h Original data
213 upf1 0.38 >More info 0.57 >More info WT whole plant Original data GEO bulk
214 16h Col-0 -0.38 >More info -0.57 >More info 00h Col-0 Original data GEO bulk
215 CMV-A2b mutant 0.38 >More info 0.57 >More info Mock-At Aerial tissues Original data GEO bulk
216 WT +elf18 2h 0.42 >More info 0.53 >More info WT untreated elf18 Original data GEO bulk
217 4C 1h 0.41 >More info 0.54 >More info 4C 0h Original data GEO bulk
218 17 0h total -0.45 >More info -0.50 >More info 27 0h total whole seedlings floating on MS medium Original data
219 wrky33 Bc inoculation 14h 0.54 >More info 0.40 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
220 penta Alternaria 3dpi 0.40 >More info 0.54 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
221 vtc2-1 -0.39 >More info -0.55 >More info Col-0 whole plant Original data GEO bulk
222 hai1-2 low water potential 0.38 >More info 0.56 >More info low water potential low water potential stress whole seedlings Original data GEO bulk
223 anac017-1 H2O2 3h -0.40 >More info -0.54 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
224 IAA/inhibitor B Treated 0.32 >More info 0.62 >More info IAA Treated Original data GEO bulk
225 Seedling-HeatStressed POLYSOMESmRNA 0.43 >More info 0.51 >More info Seedling-control POLYSOMESmRNA seedling Original data
226 phyABDE Rc50 -0.37 >More info -0.56 >More info phyABDE Dark red light whole seedling Original data GEO bulk
227 Shoot P recovery 0.39 >More info 0.54 >More info Shoot -P Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days Original data GEO bulk
228 sfr6 drought -0.27 >More info -0.66 >More info WT drought All aerial tissue Original data GEO bulk
229 shoots bhlh100/101 100uM Fe 0.57 >More info 0.36 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
230 Dark 3day hml 0.43 >More info 0.50 >More info 0h hml Original data
231 mkk1/mkk2 control rep 0.41 >More info 0.52 >More info Col-0 Time 0 rep Original data GEO bulk
232 atgsnor1-3-avrB-6h 0.42 >More info 0.51 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
233 P.syringae AvrRpt2 4 h (leaf) 0.38 >More info 0.54 >More info Mock 4 h (leaf) Original data Elicitor treatments
234 AvrRpm1 2 h (leaf) 0.38 >More info 0.54 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
235 smg7b-1 0.40 >More info 0.52 >More info WT whole plant Original data GEO bulk
236 DC3000 7h 0.40 >More info 0.52 >More info Mock 7h DC3000 Original data GEO bulk
237 Cycloheximide 3 h 0.34 >More info 0.58 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
238 1.5 hr ammonium 0.42 >More info 0.50 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
239 root longitudinal zone-1 low sulfur -0.41 >More info -0.51 >More info root longitudinal zone-1 pH 5.7 Original data GEO bulk
240 4C 2h(SOIL) 0.32 >More info 0.60 >More info 4C 0h(SOIL) Original data GEO bulk
241 dorn1-1 Root 100 mM ATP 30 min -0.31 >More info -0.61 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
242 toc1-1-77hr 0.51 >More info 0.40 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
243 pnp1-1 1wk -P 0.36 >More info 0.55 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
244 toc1-1-57hr 0.36 >More info 0.55 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
245 bio4-1 mutant leaves 0.37 >More info 0.54 >More info WT leaves leaves Original data GEO bulk
246 Cor 10h 0.38 >More info 0.53 >More info Mock 10h Cor Original data GEO bulk
247 sfr3 cold 0.39 >More info 0.52 >More info WT cold All aerial tissue Original data GEO bulk
248 Primisulfuron EC50 0.37 >More info 0.54 >More info Carrier (primisulfuron) Original data GEO bulk
249 tunicamycin -0.29 >More info -0.62 >More info DMF Original data GEO bulk
250 35S::ERF104 Flg22 4h 0.32 >More info 0.59 >More info 35S::ERF104 H2O 4h Original data GEO bulk
251 ptpks2 -0.29 >More info -0.62 >More info Col-WT leaves Original data GEO bulk
252 seedlings +5AC 0.41 >More info 0.50 >More info control seedlings 10-day old whole seedling Original data GEO bulk
253 Salt Stress 24 h (root) 0.39 >More info 0.51 >More info Stress mock 24 h (root) Original data Stress treatments
254 DC3000 2 h (leaf) 0.38 >More info 0.52 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
255 plant (Col-0) 4h phytoprostane A1 0.37 >More info 0.53 >More info plant (tga2-5-6) 4h control Original data GEO bulk
256 WT Col-0 Bgh inoculated 0.36 >More info 0.54 >More info WT Col-0 Un-inoculated Original data GEO bulk
257 rosette Light Wounded 0.37 >More info 0.53 >More info rosette Light Control Original data GEO bulk
258 Laer Flg22 2h 0.35 >More info 0.55 >More info Laer Control leaf discs Original data GEO bulk
259 eto1-4 0.32 >More info 0.58 >More info Col-0 whole seedling Original data GEO bulk
260 msh1 albino 0.39 >More info 0.50 >More info WT aerial part Original data GEO bulk
261 WT H2O2 3h 0.37 >More info 0.52 >More info WT water 3h 3h_H2O2 Original data GEO bulk
262 CCA14 dark late 0.18 >More info 0.71 >More info Col dark late Original data GEO bulk
263 sfr2 control -0.54 >More info -0.34 >More info WT control All aerial tissue Original data GEO bulk
264 ein2 1% sucrose 14-day-old -0.36 >More info -0.52 >More info Col-0 1% sucrose 14-day-old Original data GEO bulk
265 miR393 0h -0.28 >More info -0.60 >More info WT 0h Leaf tissue Original data GEO bulk
266 cs26 long day 0.35 >More info 0.53 >More info Leaves-WT-LD leaf Original data GEO bulk
267 Day Time Treatment -0.35 >More info -0.53 >More info Day Time Control 1hr white light pulse aerial rosette Original data
268 glk1 glk2 GLK1-GR +DEX 4h 0.58 >More info 0.30 >More info glk1 glk2 GLK1-GR mock 4h dexamethasone whole seedlings Original data GEO bulk
269 ein2-1 +elf18 2h -0.31 >More info -0.57 >More info WT +elf18 2h elf18 Original data GEO bulk
270 M6PR transgenic 0mM NaCl 0.31 >More info 0.56 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
271 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.50 >More info 0.37 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
272 Laer pretreat GA Flg22 1h 0.16 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
273 rcf1-1 cold 24h 0.37 >More info 0.50 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
274 WT flg22 2h 0.29 >More info 0.58 >More info WT 0h Leaf tissue Original data GEO bulk
275 TA induced 0.30 >More info 0.57 >More info Methanol TA Suspension cells Original data GEO bulk
276 ACC 3 h 0.34 >More info 0.52 >More info Mock 3 h Original data Basic hormone treatment of seedlings
277 0h light (+Lincomycin) -0.51 >More info -0.35 >More info 0h light (-Lincomycin) seedlings Original data GEO bulk
278 ein5-1 ski2-3 0.35 >More info 0.51 >More info Col-0 aerial tissue Original data
279 Pseudomonas 0.35 >More info 0.51 >More info Control pseudomonas treated whole seedling Original data GEO bulk
280 AVG 3 h -0.29 >More info -0.57 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
281 ein2-1 untreated -0.31 >More info -0.54 >More info WT untreated untreated Original data GEO bulk
282 RPL18 TuMV inoculated total RNA 0.35 >More info 0.50 >More info mock inoculated total RNA PO Original data GEO bulk
283 gpa1-4/agb1-2 ozone 2d -0.28 >More info -0.57 >More info Col ozone 2d ozone Original data GEO bulk
284 35S:RPS4 eds1-2 2h -0.23 >More info -0.62 >More info 35S:RPS4 2h leaves Original data
285 Octopus overexpressor 35SDYG25 0.54 >More info 0.30 >More info WS Original data GEO bulk
286 mpk6-ko Flg22 4h 0.28 >More info 0.56 >More info mpk6-ko H2O 4h Original data GEO bulk
287 pmr5 pmr6 0.33 >More info 0.51 >More info Col-0 Original data GEO bulk
288 rosettes WT drought 0.52 >More info 0.31 >More info rosettes WT watered Original data GEO bulk
289 oas-a1.1 Cd 18h 0.30 >More info 0.53 >More info Cd 18h root Root Original data GEO bulk
290 cat2-short-day 2d 0.28 >More info 0.55 >More info Col0-SD2 transferred to air (400 ppm) for 2 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
291 Dex-rga(delta17) 4h GA4 -0.32 >More info -0.51 >More info Vector 4h GA4 shoots Original data GEO bulk
292 IRP1-OE-Fe--shoot 0.33 >More info 0.50 >More info COL-0-Fe--shoot shoot Original data
293 Col whole leaf 7dpi 0.30 >More info 0.52 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
294 aox1a:rpoTmp untreated 0.32 >More info 0.50 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
295 Col-0 V. longisporum-inoculated 48 hpi 0.24 >More info 0.58 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
296 Ws leaf 100mM NaCl 0.25 >More info 0.56 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
297 nas4x leaves - Fe -0.28 >More info -0.53 >More info WT leaves - Fe Leaves Original data GEO bulk
298 Ws 100mM NaCl 0.25 >More info 0.56 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
299 1h +Pi -0.24 >More info -0.56 >More info 1h -Pi root Original data GEO bulk
300 Tsu-1 -Fe 24h 0.27 >More info 0.53 >More info Tsu-1 +Fe 24h roots Original data GEO bulk
301 Tsu -Fe 24h Roots 0.27 >More info 0.53 >More info Tsu +Fe 24h Roots Original data GEO bulk
302 Shoot -Cs 0.19 >More info 0.61 >More info Control-shoot Original data GEO bulk
303 WT 3h -P 0.27 >More info 0.52 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
304 sid2-avrB-6h 0.23 >More info 0.55 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
305 siliques AtHb1 control 0.26 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
306 Te 8h 0.25 >More info 0.53 >More info Te CA Leaves Original data
307 bak1-3 +Pep2 2h 0.21 >More info 0.56 >More info WT +Pep2 2h Pep2 Original data GEO bulk
308 Leaf wounded 0.14 >More info 0.63 >More info Leaf control vegetative leaf Original data GEO bulk
309 Col-0 2HS 0.27 >More info 0.50 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
310 Apex mir-3TCP 14DAS -0.26 >More info -0.50 >More info Apex Col 14DAS Original data GEO bulk
311 35S:LOB-GR mock -0.23 >More info -0.53 >More info Col mock mock seedling Original data GEO bulk
312 Root -Cs 0.20 >More info 0.55 >More info Control-root Original data GEO bulk
313 chalazal seed coat linear-cotyledon 0.24 >More info 0.50 >More info whole seeds linear-cotyledon Original data GEO bulk
314 npr1 sni1 brca2a SA -0.17 >More info -0.57 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
315 bri1-116 0.01 >More info 0.73 >More info Col seedling Original data GEO bulk
316 ABA JA 24h 0.11 >More info 0.63 >More info EtOH 24h 24hr Original data GEO bulk
317 ABA SA 24h 0.13 >More info 0.60 >More info EtOH 24h 24hr Original data GEO bulk
318 Col-0 +lincomycin 0.22 >More info 0.51 >More info Col-0 -lincomycin Original data GEO bulk
319 AFB1 flg22 2h 0.19 >More info 0.53 >More info WT 0h Leaf tissue Original data GEO bulk
320 0.2µM SMX -0.18 >More info -0.54 >More info control Whole seedling Original data GEO bulk
321 6-trichlorophenoxyacetic acid 3 h 0.10 >More info 0.61 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
322 gpa1 -ABA GC -0.18 >More info -0.53 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
323 Rose Bengal 0.5 uM 0.19 >More info 0.52 >More info Control RB and PER Rose Bengal Original data
324 ACC 1 h 0.18 >More info 0.52 >More info Mock 1 h Original data Basic hormone treatment of seedlings
325 SHR-GR Time 12H Dex -0.12 >More info -0.58 >More info SHR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
326 FLIGHT TAGESB plate6 ROOTS 0.13 >More info 0.57 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
327 cat2-short-day 4d 0.14 >More info 0.55 >More info Col0-SD4 transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
328 WT+chitooctaose 0.15 >More info 0.54 >More info WT+water chitooctaose seedlings Original data GEO bulk
329 SA Treated 0.61 >More info 0.08 >More info Water Original data GEO bulk
330 gun1-9 control -0.19 >More info -0.50 >More info Col-0 control Original data GEO bulk
331 Whole root - low pH 6H 0.19 >More info 0.50 >More info Whole root - Std pH 6H pH 4.6 for 6 hr Original data GEO bulk
332 IAA7mII over-expressor IAA Treated -0.01 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
333 SHR-GR Time 6H Dex -0.06 >More info -0.62 >More info SHR-GR Time 0H Dex Dex media for 6 hours Original data GEO bulk
334 C58 3hpi 0.17 >More info 0.50 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
335 bHLH122 ox -0.10 >More info -0.56 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
336 Chemically 0.14 >More info 0.51 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
337 Col-0 shade 0.11 >More info 0.53 >More info Col-0 light seedlings Original data GEO bulk
338 seedling 3h after HZE WT 0.61 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
339 Heat shock optimum -0.02 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
340 amiRAP aerobic -0.11 >More info -0.52 >More info WT aerobic aerobic Original data GEO bulk
341 sav1-1 light 0.09 >More info 0.54 >More info Col-0 light seedlings Original data GEO bulk
342 Col in Pi deficiency medium 0.11 >More info 0.51 >More info Col in control medium root Original data GEO bulk
343 Rsch 8h 0.11 >More info 0.51 >More info Rsch CA Leaves Original data
344 3x(p) 0.05 >More info 0.56 >More info 2x two week old seedlings Original data
345 toc1-1-81hr 0.02 >More info 0.59 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
346 ex2 flu dark 8hours/30 minute light 0.02 >More info 0.57 >More info col dark 8hours/30 minute light Original data GEO bulk
347 glk1 glk2 GLK1-GR +DEX 24h -0.56 >More info -0.02 >More info glk1 glk2 GLK1-GR mock 24h dexamethasone whole seedlings Original data GEO bulk
348 seed germinating in countinuous light 24h SL -0.09 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
349 Shoot submergence 7h 0.55 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
350 HRE1-RNAi20 normoxia -0.04 >More info -0.51 >More info Col upon normoxia normoxia seedling roots Original data GEO bulk
351 CCA1-ox 6am non-polysomal 0.02 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
352 ahg2-1sid2-2 -0.05 >More info 0.54 >More info WT (Col) control Original data GEO bulk
353 HairpinZ 4 h (leaf) 0.52 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
354 ex1 flu dark 8hours/30 minute light -0.03 >More info 0.52 >More info col dark 8hours/30 minute light Original data GEO bulk
355 3x(m) -0.12 >More info 0.54 >More info 2x two week old seedlings Original data
356 Shoot apex inflorescence (after bolting) -0.24 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
357 4d red light grown hmr-22 seedlings 0.61 >More info -0.21 >More info 4d red light grown WT(Col-0) seedlings Original data
358 abi1 hypocotyl -0.14 >More info 0.53 >More info Ler hypocotyl hypocotyl Original data GEO bulk