4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on vtc2-1
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List of experiments correlated with "vtc2-1"  Help Download transcriptome of top 30
Score Experiment Correlation from
vtc2-1		 Correlation to
vtc2-1		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 vtc2-1 1.00 >More info 1.00 >More info Col-0 whole plant Original data GEO bulk
2 vtc1-1 0.64 >More info 0.80 >More info Col-0 whole plant Original data GEO bulk
3 GST 4 h (leaf) -0.57 >More info -0.74 >More info Mock 4 h (leaf) Original data Elicitor treatments
4 spch -0.77 >More info -0.47 >More info Col-0 WT whole seedling Original data GEO bulk
5 seedlings-week-old RECA1-overexpressing
transgenic		 -0.48 >More info -0.68 >More info seedlings-week-old Col-0 seedlings Original data
6 E.orontii Infection 6 h -0.58 >More info -0.58 >More info Uninfection 6 h Original data Elicitor treatments
7 low CO2 + light -0.55 >More info -0.60 >More info normal CO2 + light Original data GEO bulk
8 efr-1 +elf18 10h 0.62 >More info 0.51 >More info WT +elf18 10h elf18 Original data GEO bulk
9 WT 2-4h Xanthomonas -0.57 >More info -0.53 >More info WT T0 Original data GEO bulk
10 cngc4 -0.53 >More info -0.57 >More info Ws-2 Seedlings Original data GEO bulk
11 CMV-WT -0.58 >More info -0.51 >More info Mock-At Aerial tissues Original data GEO bulk
12 CeO2 germinant 0.51 >More info 0.58 >More info Millipore Water germinant CeO2 seedling Original data
13 esd7-1 0.74 >More info 0.33 >More info Ler seedlings Original data GEO bulk
14 4C 2h(SOIL) -0.34 >More info -0.72 >More info 4C 0h(SOIL) Original data GEO bulk
15 dorn1-1 Root 100 mM ATP 30 min 0.44 >More info 0.62 >More info Col-0 Root 100 mM ATP 30 min Roots of 5 day-old seedlings Original data
16 seedling 30 min S Exp -0.69 >More info -0.36 >More info seedling -S Exp seedling Original data
17 hsfa2 KO heat shock 0.69 >More info 0.35 >More info WT (Col-0) heat shock whole seedling Original data GEO bulk
18 Nicotinamide-85hr -0.57 >More info -0.46 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
19 GA -0.59 >More info -0.44 >More info none GA Rosette Original data GEO bulk
20 Nicotinamide-57hr -0.68 >More info -0.35 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
21 Nicotinamide-61hr -0.53 >More info -0.49 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
22 pepr1-1 Pepr2-3 +Pep2 10h 0.54 >More info 0.48 >More info WT +Pep2 10h Pep2 Original data GEO bulk
23 WT-16ºC 0.67 >More info 0.35 >More info WT-23ºC Original data GEO bulk
24 Infected pft1 leaf -0.31 >More info -0.71 >More info Infected Col-0 leaf F. oxysporum leaf Original data GEO bulk
25 Leaf wounded -0.39 >More info -0.63 >More info Leaf control vegetative leaf Original data GEO bulk
26 glk1 glk2 GLK1-GR +DEX 4h -0.64 >More info -0.36 >More info glk1 glk2 GLK1-GR mock 4h dexamethasone whole seedlings Original data GEO bulk
27 GST NPP1 4 h (leaf) -0.46 >More info -0.54 >More info Mock 4 h (leaf) Original data Elicitor treatments
28 roots bhlh100/101 0uM Fe -0.53 >More info -0.46 >More info roots WT 0uM Fe 0uM Fe roots Original data GEO bulk
29 Lipopolysaccaride4 h (leaf) -0.45 >More info -0.54 >More info Mock 4 h (leaf) Original data Elicitor treatments
30 toc1-1-65hr -0.55 >More info -0.43 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
31 AgNO3 3 h -0.41 >More info -0.57 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
32 upf1 -0.57 >More info -0.40 >More info WT whole plant Original data GEO bulk
33 camta1/3 warm -0.40 >More info -0.56 >More info WT warm entire aerial part Original data GEO bulk
34 sni1 -0.40 >More info -0.56 >More info WT Original data GEO bulk
35 sex1-3 -0.50 >More info -0.46 >More info Col-WT leaves Original data GEO bulk
36 UV Stress 24 h (shoot) -0.52 >More info -0.44 >More info Stress mock 24 h (shoot) Original data Stress treatments
37 vtc1 (II) -0.55 >More info -0.41 >More info Col (II) rosette Original data GEO bulk
38 04h Col-0 0.55 >More info 0.40 >More info 00h Col-0 Original data GEO bulk
39 Nicotinamide-81hr -0.62 >More info -0.33 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
40 Nicotinamide-89hr -0.57 >More info -0.38 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
41 Nicotinamide-65hr -0.55 >More info -0.39 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
42 elf3-7-23ºC 0.32 >More info 0.62 >More info WT-23ºC Original data GEO bulk
43 Col ozone 3h -0.30 >More info -0.64 >More info Col clean-air 3h ozone Original data GEO bulk
44 FLIGHT TAGESB plate6 ROOTS -0.32 >More info -0.61 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
45 Selenate (root) -0.38 >More info -0.54 >More info Ws (root) Original data GEO bulk
46 Root Selenate -0.38 >More info -0.54 >More info Root control 40 micromolar selenate Root Original data GEO bulk
47 ga1-3/brm-1 0.57 >More info 0.35 >More info wt shoots Original data GEO bulk
48 Nicotinamide-73hr -0.51 >More info -0.41 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
49 irradiated leaf (cmt 5d) -0.55 >More info -0.36 >More info control leaf (cmt 5d) rosette leaf only Original data GEO bulk
50 20d after anthesis -0.55 >More info -0.35 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
51 21h-DC3000 hrpA 0.36 >More info 0.54 >More info 21h-DC3000 leaves Original data GEO bulk
52 sfr6 drought 0.38 >More info 0.51 >More info WT drought All aerial tissue Original data GEO bulk
53 4h decapitation 0.35 >More info 0.53 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
54 smg7b-1 -0.35 >More info -0.53 >More info WT whole plant Original data GEO bulk
55 Wt-BA-sample 0.57 >More info 0.31 >More info Wt-dmso-sample seedling Original data
56 sid2-1 cold 0.29 >More info 0.59 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
57 HARAP aerobic 0.21 >More info 0.66 >More info WT aerobic aerobic Original data GEO bulk
58 Nicotinamide-53hr -0.57 >More info -0.30 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
59 WT 3h -P -0.32 >More info -0.54 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
60 chito-tetramer -0.32 >More info -0.54 >More info Col Mock Original data GEO bulk
61 WT leaves - Fe -0.62 >More info -0.24 >More info WT leaves + Fe Leaves Original data GEO bulk
62 A. thaliana-A. lyrata hybrid 0.28 >More info 0.58 >More info A. thaliana mature leaves before flowering Original data GEO bulk
63 35S:CDO1 normoxia -0.34 >More info -0.51 >More info WT normoxia normoxia whole rosette Original data
64 Col-0 V. longisporum-inoculated 48 hpi -0.31 >More info -0.54 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
65 9 hr Hypoxia 1 hr recovery Total RNA -0.50 >More info -0.35 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
66 08h Col-0 0.50 >More info 0.35 >More info 00h Col-0 Original data GEO bulk
67 abi1 hypocotyl -0.16 >More info -0.69 >More info Ler hypocotyl hypocotyl Original data GEO bulk
68 gun1-9 norflurazon -0.52 >More info -0.32 >More info gun1-9 control Original data GEO bulk
69 P.p 2.5hai -0.28 >More info -0.56 >More info At-Control roots Original data GEO bulk
70 35S:RPS4 eds1-2 2h 0.19 >More info 0.65 >More info 35S:RPS4 2h leaves Original data
71 A2hsfa1-ox in quadruple mutant 0.60 >More info 0.24 >More info hsfa1 quadruple mutant whole seedling Original data GEO bulk
72 upf3 -0.53 >More info -0.30 >More info WT whole plant Original data GEO bulk
73 WT+chitooctaose -0.19 >More info -0.64 >More info WT+water chitooctaose seedlings Original data GEO bulk
74 WT (Col) glucose 0.33 >More info 0.50 >More info WT (Col) glucose seedlings Original data GEO bulk
75 npr1 sni1 brca2a SA 0.21 >More info 0.61 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
76 elevated CO2 normal Mg shoot 0.69 >More info 0.12 >More info atmospheric CO2 normal Mg shoot Shoot Original data
77 psae1-3 stn7-1 -0.51 >More info -0.29 >More info WS rosette leaves Original data GEO bulk
78 Nicotinamide-49hr -0.52 >More info -0.28 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
79 C24 UV1 0.62 >More info 0.18 >More info C24 mock UV seedling Original data
80 toc1-1-57hr -0.27 >More info -0.53 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
81 WT chitooctaose -0.24 >More info -0.56 >More info WT water Original data GEO bulk
82 bio4-1 mutant leaves -0.54 >More info -0.25 >More info WT leaves leaves Original data GEO bulk
83 15m light -0.53 >More info -0.26 >More info before light whole seedlings Original data GEO bulk
84 flu dark 8hours/30 minute light -0.29 >More info -0.50 >More info col dark 8hours/30 minute light Original data GEO bulk
85 P.p 6hai -0.24 >More info -0.55 >More info At-Control roots Original data GEO bulk
86 bHLH122 ox 0.21 >More info 0.58 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
87 shoots WT 0uM Fe -0.52 >More info -0.26 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
88 aba2 1% sucrose 12-day-old -0.27 >More info -0.51 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
89 coi1-2 -0.23 >More info -0.55 >More info Col-0 mock Whole seedling Original data GEO bulk
90 lht1 untreated -0.57 >More info -0.21 >More info WT untreated untreated leaf Original data GEO bulk
91 AFB1 0h -0.62 >More info -0.15 >More info WT 0h Leaf tissue Original data GEO bulk
92 mutant acs5D (single mutant) -0.50 >More info -0.27 >More info col control (single mutant) Original data GEO bulk
93 chito-octamer -0.19 >More info -0.58 >More info Col Mock Original data GEO bulk
94 rsa3-1 Na 24h -0.24 >More info -0.53 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
95 WT Rc50 -0.53 >More info -0.23 >More info WT Dark red light whole seedling Original data GEO bulk
96 WT(Ler) Rc50 -0.54 >More info -0.21 >More info WT(Ler) Dark Original data GEO bulk
97 myb61 cork -0.20 >More info -0.55 >More info wt cork cork Original data GEO bulk
98 S82-2 0.54 >More info 0.20 >More info wt Original data GEO bulk
99 npr1 sni1 SA -0.17 >More info -0.56 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
100 Cocultivation 8 hrs leaf -0.53 >More info -0.20 >More info Mock cocultivation 8 hrs leaf Leaf Original data
101 shoots bhlh100/101 100uM Fe -0.54 >More info -0.19 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
102 phyB mutant 22C 10hrs 0.21 >More info 0.52 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
103 pepr1-1 Pepr2-3 +Pep2 2h 0.21 >More info 0.52 >More info WT +Pep2 2h Pep2 Original data GEO bulk
104 Col whole leaf 3dpi -0.12 >More info -0.60 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
105 aba3-1 -0.10 >More info -0.62 >More info wt Original data GEO bulk
106 Col-0 norflurazon -0.50 >More info -0.21 >More info Col-0 control Original data GEO bulk
107 Laer pretreat GA Flg22 1h -0.00 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
108 aba1 hypocotyl -0.19 >More info -0.52 >More info Ler hypocotyl hypocotyl Original data GEO bulk
109 shoots bhlh100/101 0uM Fe -0.54 >More info -0.16 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
110 Heat shock optimum 0.05 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
111 eto1-4 +370 0.58 >More info 0.12 >More info eto1-4 whole seedling Original data GEO bulk
112 CMV-A2b mutant -0.13 >More info -0.57 >More info Mock-At Aerial tissues Original data GEO bulk
113 Cycloheximide 3 h -0.14 >More info -0.55 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
114 WT-Dry -0.14 >More info -0.55 >More info WT-CK dehydration treatment 1h Original data
115 IAA7mII over-expressor IAA Treated 0.00 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
116 Starch sheath 5 days MS incubation -0.53 >More info -0.15 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
117 R. solani AG8 -0.15 >More info -0.52 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
118 AtLysM RLK1 mutant chitooctaose 0.17 >More info 0.50 >More info WT chitooctaose Original data GEO bulk
119 Col leaf scrape 5 dpi 0.50 >More info 0.16 >More info Col whole leaf 5d UI leaf section scrapes Original data GEO bulk
120 Col in Pi deficiency medium -0.13 >More info -0.53 >More info Col in control medium root Original data GEO bulk
121 IRP1-OE-Ctrl--root -0.15 >More info -0.51 >More info COL-0-Ctrl--root root Original data
122 pip3 At2g19270 RNAi 24 -0.54 >More info -0.11 >More info Nd-1 whole plant Original data GEO bulk
123 Col whole leaf 5dpi -0.14 >More info -0.51 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
124 30m light -0.53 >More info -0.11 >More info before light whole seedlings Original data GEO bulk
125 Leafminer damaged seedlings 0.07 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
126 FLIGHT TAGESB plate6 SHOOTS -0.51 >More info -0.12 >More info GROUND CONTROL TAGESB plate6 SHOOTS plant tissue Original data
127 E.orontii Infection 3 day 0.03 >More info -0.66 >More info Uninfection 3 day Original data Elicitor treatments
128 siliques AtHb1 control 0.11 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
129 35S::MBF1c -0.02 >More info -0.60 >More info control Original data GEO bulk
130 S15-118 -0.09 >More info -0.53 >More info wt Original data GEO bulk
131 frb1 mutant -0.50 >More info -0.10 >More info WT whole seedling Original data GEO bulk
132 FAMA induced 4h 0.53 >More info 0.06 >More info control 4h Whole seedling Original data GEO bulk
133 Root GLU1-KO 0.05 >More info 0.54 >More info Root Col(0) roots Original data GEO bulk
134 bri1-116 -0.14 >More info 0.73 >More info Col seedling Original data GEO bulk
135 pip3 At2g19270 RNAi 32 -0.53 >More info -0.05 >More info Nd-1 whole plant Original data GEO bulk
136 Protoplast Induced -0.01 >More info -0.56 >More info Uninduced Original data GEO bulk
137 WT 3H Cold -0.03 >More info -0.52 >More info WT control Original data GEO bulk
138 4C 1h -0.01 >More info -0.54 >More info 4C 0h Original data GEO bulk
139 myb61 xylem 0.01 >More info -0.56 >More info wt xylem xylem Original data GEO bulk
140 B.cinerea 18 h infection -0.02 >More info -0.52 >More info Mock 18 h Original data Botrytis cinerea infection
141 root longitudinal zone-3 -Fe 0.00 >More info -0.54 >More info root longitudinal zone-3 standard Original data GEO bulk
142 Botrytis cinerea 18h -0.02 >More info -0.52 >More info control 18h Original data GEO bulk
143 HairpinZ 4 h (leaf) -0.50 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
144 cngc19 0.02 >More info 0.51 >More info Col-0 root Original data GEO bulk
145 Col-0 (t-zeatin 3 h) -0.00 >More info 0.52 >More info Col-0 Original data Cytokinin treatment of seedlings
146 bak1-3 +Pep2 2h -0.00 >More info -0.52 >More info WT +Pep2 2h Pep2 Original data GEO bulk
147 M6PR transgenic leaf 0mM NaCl -0.00 >More info -0.51 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
148 WT (Ler) CK25 0.52 >More info -0.03 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
149 CCA1-ox 6am non-polysomal -0.02 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
150 12m.KCl 0.06 >More info -0.53 >More info To. KCl 14 day old Roots Original data GEO bulk
151 root endodermis and quiescent center pH4.6 -0.50 >More info 0.05 >More info root endodermis and quiescent center pH5.7 Original data GEO bulk
152 C24 24h cold -0.54 >More info 0.11 >More info Col 24h cold leaf Original data GEO bulk
153 Shoot apex inflorescence (after bolting) -0.23 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
154 pft1 16C -0.13 >More info 0.50 >More info WT 16C seedling Original data GEO bulk
155 Oxidative Stress 3 h (root) -0.23 >More info 0.58 >More info Stress mock 3 h (root) Original data Stress treatments
156 Col BTH -0.36 >More info 0.67 >More info Col rosettes Original data GEO bulk
157 ptpks2 -0.27 >More info 0.57 >More info Col-WT leaves Original data GEO bulk
158 root - 08% oxygen - 30min -0.50 >More info 0.21 >More info root - 21% oxygen - 30min Original data GEO bulk
159 seed germinating in countinuous light 24h SL -0.38 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
160 hsfa1 quadruple mutant -0.53 >More info 0.25 >More info WT (Col-0) whole seedling Original data GEO bulk
161 iron minus 6 h 0.22 >More info -0.50 >More info iron +6 h root Original data GEO bulk
162 Starch sheath 2 days MS incubation -0.52 >More info 0.26 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
163 Col0-PsmES4326-24hpi -0.35 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
164 R. solani AG2-1 0.30 >More info -0.53 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
165 WT Atum 1h -0.50 >More info 0.37 >More info WT 0h Leaf tissue Original data GEO bulk