4.0:Analysis result - correlation network
Home
Method
Manual
History
Module-based correlation network(MCN) centered on iron minus 6 h
> How to read results
Simple
All
>>Show Interactive view (test)
List of experiments correlated with "iron minus 6 h"
Download transcriptome of top 30
Score
Experiment
Correlation from
iron minus 6 h
Correlation to
iron minus 6 h
Control Experiment
Genotype
Treatment
Tissue
Link to
original data
Experimental
Category
Data set
Details
1
iron minus 6 h
1.00
>More info
1.00
>More info
iron +6 h
root
Original data
GEO bulk
2
root longitudinal zone-4 -Fe
0.80
>More info
0.75
>More info
root longitudinal zone-4 standard
Original data
GEO bulk
3
iron minus 24h
0.82
>More info
0.67
>More info
iron +24h
root
Original data
GEO bulk
4
root longitudinal zone-3 -Fe
0.73
>More info
0.66
>More info
root longitudinal zone-3 standard
Original data
GEO bulk
5
Tsu-1 -Fe 48h
0.71
>More info
0.63
>More info
Tsu-1 +Fe 24h
roots
Original data
GEO bulk
6
Tsu -Fe 48h Roots
0.71
>More info
0.63
>More info
Tsu +Fe 24h Roots
Original data
GEO bulk
7
Col -Fe
0.76
>More info
0.55
>More info
Col-es
root
Original data
GEO bulk
8
roots WT 0uM Fe
0.80
>More info
0.48
>More info
roots WT 100uM Fe
0uM Fe
roots
Original data
GEO bulk
9
root longitudinal zone-2 -Fe
0.65
>More info
0.55
>More info
root longitudinal zone-2 standard
Original data
GEO bulk
10
whole roots -Fe 24hour
0.62
>More info
0.56
>More info
whole roots standard
Original data
GEO bulk
11
Fe starvation 24 h
0.62
>More info
0.56
>More info
Control
Original data
GEO bulk
12
root longitudinal zone-1 -Fe
0.65
>More info
0.52
>More info
root longitudinal zone-1 standard
Original data
GEO bulk
13
WT roots - Fe
0.79
>More info
0.37
>More info
WT roots + Fe
Roots
Original data
GEO bulk
14
ARR22-ox
0.65
>More info
0.48
>More info
Col-0
Original data
Cytokinin treatment of seedlings
15
root - 01% oxygen - 30min
-0.53
>More info
-0.59
>More info
root - 21% oxygen - 30min
Original data
GEO bulk
16
COL-0-Fe--root
0.74
>More info
0.32
>More info
COL-0-Ctrl--root
root
Original data
17
3x(m)
-0.58
>More info
-0.47
>More info
2x
two week old seedlings
Original data
18
root - 04% oxygen - 48h
-0.25
>More info
-0.78
>More info
root - 21% oxygen - 48h
Original data
GEO bulk
19
ABA SA 24h
0.43
>More info
0.55
>More info
EtOH 24h
24hr
Original data
GEO bulk
20
Mutant lwd1_lwd2
-0.39
>More info
-0.57
>More info
Wildtype for phy mutants
Original data
GEO bulk
21
LWD1 and LWD2 in photoperiod regulation (lwd1lwd2
)
-0.39
>More info
-0.57
>More info
LWD1 and LWD2 in photoperiod regulation (wt )
Original data
GEO bulk
22
IAA7mII over-expressor IAA Treated
0.27
>More info
0.69
>More info
empty vector IAA Treated
Original data
GEO bulk
23
nas4x roots + Fe
0.66
>More info
0.28
>More info
WT roots + Fe
Roots
Original data
GEO bulk
24
ga1-3 SCL3OE
0.57
>More info
0.37
>More info
ga1-3
whole root
Original data
25
root - 04% oxygen - 30min
-0.37
>More info
-0.57
>More info
root - 21% oxygen - 30min
Original data
GEO bulk
26
Heat shock optimum
0.29
>More info
0.65
>More info
Heat shock baseline
Photosynthesis at optimum temperature
leaf first fully expanded
Original data
GEO bulk
27
COL-0-Fe--shoot
0.57
>More info
0.32
>More info
COL-0-Ctrl--shoot
shoot
Original data
28
BLM
0.70
>More info
0.18
>More info
CK
BLM
seedling
Original data
29
noa1-2
-0.61
>More info
-0.26
>More info
Col-0
whole seedlings
Original data
GEO bulk
30
mbd6 mutant thaliana 10-day-old seedling
-0.56
>More info
-0.30
>More info
WT thaliana 10-day-old seedling
10 days old seedling
Original data
31
Red/FR Light45min
0.16
>More info
0.70
>More info
FarRed Light 45min
Original data
Light treatments
32
Cd 18h root
0.18
>More info
0.66
>More info
WT-Untreated
Root
Original data
GEO bulk
33
Tsu -Fe 48h Shoots
0.57
>More info
0.27
>More info
Tsu +Fe 24h Shoots
Original data
GEO bulk
34
siliques AtHb1 control
0.31
>More info
0.52
>More info
siliques WT control
control
silique
Original data
GEO bulk
35
Root -K
0.60
>More info
0.23
>More info
Control-root
Original data
GEO bulk
36
K starvation (root)
0.60
>More info
0.22
>More info
Ws (root)
Original data
GEO bulk
37
iron minus 1 h
0.60
>More info
0.22
>More info
iron +1 h
root
Original data
GEO bulk
38
FarRed Light 45min
-0.10
>More info
-0.72
>More info
White Light 45min
Original data
Light treatments
39
Total RNA 35S:HF-RPL18
-0.28
>More info
-0.53
>More info
Total RNA csp1
12h non-stress
rosettes
Original data
GEO bulk
40
Stem+10 mg/g NPA
-0.58
>More info
-0.22
>More info
Stem (mock control)
NPA treated stem
stem
Original data
GEO bulk
41
SCL3 OE
0.60
>More info
0.19
>More info
Col-0
whole root
Original data
GEO bulk
42
35S::CBF2
0.58
>More info
0.21
>More info
Ws2
Original data
GEO bulk
43
root - 08% oxygen - 2h
-0.01
>More info
-0.77
>More info
root - 21% oxygen - 2h
Original data
GEO bulk
44
sdg8-2 mutant
0.52
>More info
0.25
>More info
wild type
leaf
Original data
GEO bulk
45
Col0-PsmES4326-24hpi
0.16
>More info
0.61
>More info
Col0-mock-24hpi
leaf
Original data
GEO bulk
46
bri1-116
0.04
>More info
0.73
>More info
Col
seedling
Original data
GEO bulk
47
Laer pretreat GA Flg22 1h
0.03
>More info
0.71
>More info
Laer pretreat water control
leaf discs
Original data
GEO bulk
48
WT Root Hypoxia
-0.05
>More info
-0.68
>More info
WT Root Normoxia (mock)
Hypoxia
Root
Original data
GEO bulk
49
essp4/sdg8-5 mutant
0.54
>More info
0.19
>More info
wild type
leaf
Original data
GEO bulk
50
Col BTH
0.05
>More info
0.67
>More info
Col
rosettes
Original data
GEO bulk
51
whole roots -Fe 72 hour
0.63
>More info
0.09
>More info
whole roots standard
Original data
GEO bulk
52
vte2-1 3d vernalization
0.54
>More info
0.18
>More info
WT 3d vernalization
Original data
GEO bulk
53
Fe starvation 72 h
0.63
>More info
0.09
>More info
Control
Original data
GEO bulk
54
WT 3h -P
-0.51
>More info
-0.21
>More info
WT 3h +P
No phosphate medium
seedlings without roots
Original data
GEO bulk
55
Laer GA 1h
0.18
>More info
0.54
>More info
Laer Control
leaf discs
Original data
GEO bulk
56
8 hr ammonium
-0.19
>More info
-0.52
>More info
immediately prior to nitrogen addtion
roots from hydroponically grown plants
Original data
GEO bulk
57
root - 04% oxygen - 2h
0.11
>More info
-0.81
>More info
root - 21% oxygen - 2h
Original data
GEO bulk
58
gapcp1gapcp2
0.63
>More info
0.07
>More info
WT
Original data
GEO bulk
59
whole roots -Fe 48 hour
0.64
>More info
0.06
>More info
whole roots standard
Original data
GEO bulk
60
sta1
0.63
>More info
0.04
>More info
WT
Original data
GEO bulk
61
entire vegetative rosette
-0.51
>More info
-0.15
>More info
Col-0 Mock WL
entire vegetative rosette
Original data
62
root - 01% oxygen - 2h
0.13
>More info
-0.78
>More info
root - 21% oxygen - 2h
Original data
GEO bulk
63
eds16 whole leaf 5dpi
-0.52
>More info
-0.12
>More info
Col whole leaf 5dpi
whole leaf
Original data
GEO bulk
64
BLM+INA
0.57
>More info
0.07
>More info
CK
BLM and INA
seedling
Original data
65
root - 08% oxygen - 48h
-0.08
>More info
-0.55
>More info
root - 21% oxygen - 48h
Original data
GEO bulk
66
WT Shoot Hypoxia
0.11
>More info
-0.73
>More info
WT Shoot Normoxia (mock)
Hypoxia
Shoot
Original data
GEO bulk
67
hog1-7
0.58
>More info
0.03
>More info
wt
whole seedling
Original data
GEO bulk
68
mutant-line774
0.58
>More info
0.03
>More info
WT-control
whole plant
Original data
GEO bulk
69
Root -P
-0.52
>More info
-0.08
>More info
Root Mock
P_starvation 10-day Phosphate starvation
Original data
GEO bulk
70
Drought Stress 24 h (root)
-0.08
>More info
-0.52
>More info
Stress mock 24 h (root)
Original data
Stress treatments
71
NJ15
-0.01
>More info
0.61
>More info
mock
sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates
Seedlings
Original data
72
Col-0-30min IAA
0.51
>More info
0.08
>More info
Col-0-0h IAA
whole plant
Original data
GEO bulk
73
PAHs stress
0.55
>More info
0.03
>More info
exp control
phenanthrene
whole plants
Original data
GEO bulk
74
vtc1-1
-0.50
>More info
-0.08
>More info
Col-0
whole plant
Original data
GEO bulk
75
Tsu -Fe 24h Shoots
0.54
>More info
0.03
>More info
Tsu +Fe 24h Shoots
Original data
GEO bulk
76
root hypoxia total
-0.04
>More info
-0.53
>More info
root control total
Original data
GEO bulk
77
estradiole-induced ANAC059
-0.04
>More info
0.61
>More info
transgenic (empty vector inducible system)
Original data
GEO bulk
78
MPK6 ox Root Hypoxia
-0.03
>More info
-0.53
>More info
WT Root Normoxia (mock)
Hypoxia
Root
Original data
GEO bulk
79
35S:PCO1 hypoxia
-0.01
>More info
0.56
>More info
WT hypoxia
whole rosette
Original data
80
Root P recovery
0.52
>More info
0.02
>More info
Root -P
Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days
Original data
GEO bulk
81
Sha-1h IAA
0.60
>More info
-0.06
>More info
Sha-0h IAA
whole plant
Original data
GEO bulk
82
MPK6 ox Shoot Hypoxia
0.14
>More info
-0.68
>More info
WT Shoot Normoxia (mock)
Hypoxia
Shoot
Original data
GEO bulk
83
phr1 Root-Pi
-0.51
>More info
-0.02
>More info
WT Root+Pi
roots
Original data
GEO bulk
84
35S::KLU
0.52
>More info
-0.00
>More info
WT
Shoot
Original data
85
8h-DC3000 hrpA
-0.00
>More info
0.52
>More info
8h-DC3000
leaves
Original data
GEO bulk
86
20m.KCl
-0.01
>More info
0.53
>More info
To.
KCl
14 day old Roots
Original data
GEO bulk
87
brm-101
0.56
>More info
-0.06
>More info
Ler
Original data
GEO bulk
88
Leafminer damaged seedlings
-0.06
>More info
0.56
>More info
Healthy seedlings
leaves
Original data
GEO bulk
89
dde2-2 24hpi A. brassicicola
-0.00
>More info
0.50
>More info
Col-0 9 hpi A. brassicicola
3rd-5th true leaves
Original data
90
nia1nia2noa1-2
-0.50
>More info
0.01
>More info
Col-0
whole seedlings
Original data
GEO bulk
91
P.p 10.5hai
0.01
>More info
-0.50
>More info
At-Control
roots
Original data
GEO bulk
92
SA 24h
0.56
>More info
-0.09
>More info
EtOH 24h
24hr
Original data
GEO bulk
93
seed germinating in countinuous light 24h SL
-0.20
>More info
0.67
>More info
Control for tissue data
seed
Original data
GEO bulk
94
35S::LFY
0.53
>More info
-0.08
>More info
Landsberg erecta
seedlings
Original data
GEO bulk
95
CCA1-ox 6am non-polysomal
-0.07
>More info
0.51
>More info
WT 6am non-polysomal
aerial part
Original data
96
Aerobic e1 ate2
0.16
>More info
-0.59
>More info
Aerobic Col-0
aerobic (normal) conditions
seedlings
Original data
GEO bulk
97
root - 08% oxygen - 30min
0.18
>More info
-0.59
>More info
root - 21% oxygen - 30min
Original data
GEO bulk
98
INA
0.51
>More info
-0.11
>More info
CK
INA
seedling
Original data
99
Tsu -Fe 24h Roots
0.55
>More info
-0.16
>More info
Tsu +Fe 24h Roots
Original data
GEO bulk
100
Tsu-1 -Fe 24h
0.55
>More info
-0.16
>More info
Tsu-1 +Fe 24h
roots
Original data
GEO bulk
101
20h Col-0
0.13
>More info
-0.51
>More info
00h Col-0
Original data
GEO bulk
102
Col-0 wt Hypoxic
0.19
>More info
-0.57
>More info
Col-0 wt Aerobic
hypoxic treatment
Original data
GEO bulk
103
Shoot apex inflorescence (after bolting)
-0.29
>More info
0.65
>More info
Control for tissue data
Original data
Developmental series; organs / tissues at different ages
104
Root wt CLE10
0.22
>More info
-0.57
>More info
Root wt CLE25
root tip
Original data
GEO bulk
105
nar1-4/-
0.56
>More info
-0.22
>More info
WT
whole seedling
Original data
GEO bulk
106
shoot hypoxia total
0.27
>More info
-0.56
>More info
shoot control total
Original data
GEO bulk
107
vtc2-1
-0.50
>More info
0.22
>More info
Col-0
whole plant
Original data
GEO bulk
108
IPT8 induced 24h
-0.24
>More info
0.50
>More info
Control 24h
24 hours
primary root tip (5 mm)
Original data
GEO bulk
109
Aerobic prt6
0.32
>More info
-0.58
>More info
Aerobic Col-0
aerobic (normal) conditions
seedlings
Original data
GEO bulk
110
ein2 mutant roots mock
-0.53
>More info
0.33
>More info
roots mock
Original data
GEO bulk
111
short 17-degree-
-0.31
>More info
0.51
>More info
control short
Original data
GEO bulk
112
B.cinerea 18 h infection
0.43
>More info
-0.61
>More info
Mock 18 h
Original data
Botrytis cinerea
infection
113
Botrytis cinerea 18h
0.43
>More info
-0.61
>More info
control 18h
Original data
GEO bulk