4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on toc1-1-57hr
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List of experiments correlated with "toc1-1-57hr"  Help Download transcriptome of top 30
Score Experiment Correlation from
toc1-1-57hr		 Correlation to
toc1-1-57hr		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 toc1-1-57hr 1.00 >More info 1.00 >More info WT-untreated-57hr none seedlings aerial tissue Original data GEO bulk
2 toc1-1-53hr 0.91 >More info 0.90 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
3 toc1-1-81hr 0.87 >More info 0.88 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
4 toc1-1-49hr 0.89 >More info 0.84 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
5 toc1-1-85hr 0.89 >More info 0.84 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
6 toc1-1-77hr 0.84 >More info 0.86 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
7 toc1-1-61hr 0.88 >More info 0.80 >More info WT-untreated-61hr none seedlings aerial tissue Original data GEO bulk
8 toc1-1-73hr 0.82 >More info 0.86 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
9 toc1-1-65hr 0.87 >More info 0.73 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
10 AgNO3 3 h 0.69 >More info 0.79 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
11 Chitosan 3h Treatment 0.72 >More info 0.73 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
12 cop1 Seedling BL 0.73 >More info 0.68 >More info WT Seedling BL Original data GEO bulk
13 atmyc2 cop1 Seedling BL 0.63 >More info 0.76 >More info WT Seedling BL Original data GEO bulk
14 toc1-1-69hr 0.71 >More info 0.66 >More info WT-untreated-69hr none seedlings aerial tissue Original data GEO bulk
15 WT 30μM arsenate 8 hours. 0.72 >More info 0.62 >More info WT control (not supplemented). Original data
16 Nicotinamide-57hr 0.67 >More info 0.65 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
17 smg7b-1 0.69 >More info 0.63 >More info WT whole plant Original data GEO bulk
18 cdpk6-yfp 0.66 >More info 0.65 >More info Kan seedlings Original data GEO bulk
19 Col-0 DCA 48h 0.58 >More info 0.73 >More info Col-0 MOCK 48h Original data GEO bulk
20 ice1 control 0.64 >More info 0.66 >More info WT control Original data GEO bulk
21 csn5 (csn5a-2 csn5b) light 0.72 >More info 0.58 >More info WT light Original data GEO bulk
22 aba3-1 0.53 >More info 0.75 >More info wt Original data GEO bulk
23 WT-NOCO2 INFECTED 0.65 >More info 0.62 >More info WT-MOCK Original data GEO bulk
24 upf3 0.67 >More info 0.60 >More info WT whole plant Original data GEO bulk
25 Nicotinamide-81hr 0.64 >More info 0.62 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
26 Nicotinamide-73hr 0.59 >More info 0.67 >More info WT-untreated-73hr nicotinamide aerial tissue Original data GEO bulk
27 CMP 4hr 0.63 >More info 0.62 >More info Acetone 4hr root Original data GEO bulk
28 Mutant NahG(leaf) -0.66 >More info -0.59 >More info Col-0 (leaf) Original data GEO bulk
29 4C 1h 0.63 >More info 0.62 >More info 4C 0h Original data GEO bulk
30 seedlings +5AC 0.68 >More info 0.56 >More info control seedlings 10-day old whole seedling Original data GEO bulk
31 WT +Pep2 10h 0.68 >More info 0.56 >More info WT untreated Pep2 Original data GEO bulk
32 AtLysM RLK1 mutant water 0.72 >More info 0.52 >More info WT water Original data GEO bulk
33 erf5 erf6 -0.70 >More info -0.54 >More info WT+water water seedlings Original data GEO bulk
34 WT +elf18 10h 0.61 >More info 0.63 >More info WT untreated elf18 Original data GEO bulk
35 P.p 30hai 0.70 >More info 0.54 >More info At-Control roots Original data GEO bulk
36 csn3-1 light 0.71 >More info 0.52 >More info WT light Original data GEO bulk
37 SA 0.56 >More info 0.67 >More info WT mock Whole seedling Original data GEO bulk
38 cpr5 0.64 >More info 0.59 >More info WT seedling Original data GEO bulk
39 OH1 0.66 >More info 0.56 >More info Col-0 leaves Original data GEO bulk
40 oas-a1.1 Cd 24h 0.50 >More info 0.72 >More info Cd 24h root Shoot Original data GEO bulk
41 ice1 6H Cold 0.62 >More info 0.60 >More info WT 6H Cold Original data GEO bulk
42 BLM+INA 0.63 >More info 0.59 >More info CK BLM and INA seedling Original data
43 R. solani AG8 0.57 >More info 0.65 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
44 WT cold 24h 0.61 >More info 0.60 >More info WT cold 0h cold at 4°C seedlings Original data GEO bulk
45 WT-16ºC -0.55 >More info -0.66 >More info WT-23ºC Original data GEO bulk
46 WT-SA 0.55 >More info 0.66 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
47 toc1-1-93hr 0.71 >More info 0.50 >More info WT-untreated-93hr none seedlings aerial tissue Original data GEO bulk
48 AFB1 0h 0.68 >More info 0.52 >More info Col 0h Leaf Original data GEO bulk
49 Primisulfuron EC50 0.66 >More info 0.54 >More info Carrier (primisulfuron) Original data GEO bulk
50 Col-0 INA 48h 0.54 >More info 0.66 >More info Col-0 MOCK 48h Original data GEO bulk
51 R. solani AG2-1 0.55 >More info 0.65 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
52 bio4-1 mutant watered00µM biotin leaves -0.68 >More info -0.52 >More info bio4-1 mutant leaves leaves Original data GEO bulk
53 Triazolopyrimidine EC50 0.65 >More info 0.55 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
54 camta2/3 warm 0.62 >More info 0.58 >More info WT warm entire aerial part Original data GEO bulk
55 CMP 24hr 0.61 >More info 0.59 >More info Acetone 24hr root Original data GEO bulk
56 Mutant ga1-5 -0.63 >More info -0.57 >More info Ler-1 Original data Comparison of plant hormone related mutant
57 5-Triiodobenzoic acid3 h 0.47 >More info 0.73 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
58 Col leaves 48h LT 0.59 >More info 0.60 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
59 Mutant siz1-3 0.56 >More info 0.63 >More info Col-0 Original data GEO bulk
60 plant (tga2-5-6) 4h phytoprostane A1 0.59 >More info 0.60 >More info plant (tga2-5-6) 4h control Original data GEO bulk
61 siz1-3 control 0.56 >More info 0.63 >More info Col-0 control Original data GEO bulk
62 P.p 6hai 0.65 >More info 0.53 >More info At-Control roots Original data GEO bulk
63 Nicotinamide-61hr 0.67 >More info 0.51 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
64 P.p 2.5hai 0.54 >More info 0.64 >More info At-Control roots Original data GEO bulk
65 pmr5 0.56 >More info 0.62 >More info Col-0 Original data GEO bulk
66 S15-118 0.55 >More info 0.63 >More info wt Original data GEO bulk
67 Nicotinamide-53hr 0.60 >More info 0.58 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
68 pepr1-1 Pepr2-3 +Pep2 2h -0.61 >More info -0.57 >More info WT +Pep2 2h Pep2 Original data GEO bulk
69 Elevated CO2 AMPLE N NIGHT 0.50 >More info 0.67 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
70 Cor 24h 0.53 >More info 0.64 >More info Mock 24h Cor Original data GEO bulk
71 IAA/inhibitor B Treated 0.56 >More info 0.61 >More info IAA Treated Original data GEO bulk
72 iae1 -0.56 >More info -0.61 >More info B179 Original data GEO bulk
73 DC3000 24h 0.58 >More info 0.59 >More info Mock 24h DC3000 Original data GEO bulk
74 B.cinerea 18 h infection 0.46 >More info 0.71 >More info Mock 18 h Original data Botrytis cinerea infection
75 Botrytis cinerea 18h 0.46 >More info 0.71 >More info control 18h Original data GEO bulk
76 P.p 10.5hai 0.63 >More info 0.53 >More info At-Control roots Original data GEO bulk
77 S58-2 0.50 >More info 0.66 >More info wt Original data GEO bulk
78 phr1 Shoot-Pi 0.59 >More info 0.57 >More info WT Root-Pi shoots Original data GEO bulk
79 bak1-3 +Pep2 10h 0.62 >More info 0.53 >More info WT +Pep2 10h Pep2 Original data GEO bulk
80 35S:RPS4 eds1-2 24h -0.59 >More info -0.56 >More info 35S:RPS4 24h leaves Original data
81 miR 0h 0.64 >More info 0.51 >More info Col 0h Leaf Original data GEO bulk
82 A. thaliana-A. lyrata hybrid -0.57 >More info -0.58 >More info A. thaliana mature leaves before flowering Original data GEO bulk
83 6h +Pi -0.54 >More info -0.61 >More info 6h -Pi root Original data GEO bulk
84 Elevated CO2 AMPLE N DAY 0.42 >More info 0.73 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
85 Nicotinamide-49hr 0.58 >More info 0.56 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
86 camta1/3 warm 0.54 >More info 0.60 >More info WT warm entire aerial part Original data GEO bulk
87 9 hr Hypoxia 1 hr recovery Total RNA 0.58 >More info 0.56 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
88 UV Stress 24 h (shoot) 0.52 >More info 0.62 >More info Stress mock 24 h (shoot) Original data Stress treatments
89 WT chitooctaose 0.61 >More info 0.53 >More info WT water Original data GEO bulk
90 46T-CK 0.42 >More info 0.72 >More info WT-CK none Original data
91 cpr5scv1 0.57 >More info 0.56 >More info WT(COL) Original data GEO bulk
92 GR-REV 30min 0.64 >More info 0.49 >More info Col 30min Original data GEO bulk
93 smg5-2 0.60 >More info 0.53 >More info WT whole plant Original data GEO bulk
94 csn4-1 mutant 0.66 >More info 0.47 >More info WT dark Original data GEO bulk
95 npr1-3 DCA 48h 0.55 >More info 0.58 >More info npr1-3 MOCK 48h Original data GEO bulk
96 LTN008-2 aza-dc 0.62 >More info 0.51 >More info LTN012-2 Mock Original data
97 noa1-2 0.60 >More info 0.53 >More info Col-0 whole seedlings Original data GEO bulk
98 del1-1 mutant 5d uninfected 0.59 >More info 0.53 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
99 Imidazolinone EC50 0.53 >More info 0.58 >More info Carrier (Imidazolinone) Original data GEO bulk
100 Phytoprostane A1 4 h 0.50 >More info 0.61 >More info Col-0 Original data GEO bulk
101 Cycloheximide 3 h 0.53 >More info 0.58 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
102 cpr5npr1svi1 0.54 >More info 0.57 >More info WT(COL) Original data GEO bulk
103 CeO2 germinant -0.52 >More info -0.59 >More info Millipore Water germinant CeO2 seedling Original data
104 long 17-degree- 0.42 >More info 0.69 >More info control long Original data GEO bulk
105 Chemically 0.42 >More info 0.69 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
106 chito-tetramer 0.56 >More info 0.54 >More info Col Mock Original data GEO bulk
107 Mutant siz1-3 (Drought) 0.53 >More info 0.57 >More info Col-0 (Drought) Original data GEO bulk
108 Mutant gh3.5-1D (AvrRpt2) 0.60 >More info 0.50 >More info Col-0 (AvrRpt2) Original data GEO bulk
109 siz1-3 drought 0.53 >More info 0.57 >More info Col-0 drought Original data GEO bulk
110 abi4 vtc2 (I) 0.57 >More info 0.53 >More info Col (I) rosette Original data GEO bulk
111 Cd 24h root -0.48 >More info -0.62 >More info WT-Untreated Shoot Original data GEO bulk
112 wavy 0.43 >More info 0.67 >More info WT Original data GEO bulk
113 sid2-1 cold -0.49 >More info -0.61 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
114 Shoot -Cs 0.45 >More info 0.65 >More info Control-shoot Original data GEO bulk
115 Col BTH 0.43 >More info 0.67 >More info Col rosettes Original data GEO bulk
116 sdg2 0.69 >More info 0.41 >More info wt seedling Original data GEO bulk
117 Col-0 low oxygen 0.54 >More info 0.55 >More info Col-0 control low oxygen root Original data GEO bulk
118 Col ozone 2d 0.60 >More info 0.49 >More info Col clean-air 2d ozone Original data GEO bulk
119 dicamba 0.51 >More info 0.58 >More info WT mock whole seedling Original data GEO bulk
120 Col0-PsmES4326-24hpi 0.48 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
121 WT powdery mildew 0.49 >More info 0.60 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
122 E2Fa-Dpa 0.62 >More info 0.46 >More info WT Original data GEO bulk
123 WT cold 0.52 >More info 0.56 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
124 cpr5 0.55 >More info 0.53 >More info WT(COL) Original data GEO bulk
125 ceh1 mutant 0.51 >More info 0.57 >More info Parent line Original data
126 DFPM 0.55 >More info 0.53 >More info control Original data GEO bulk
127 Col whole leaf 5dpi 0.50 >More info 0.58 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
128 IMI 4mM 0.54 >More info 0.54 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
129 Protoplast Induced 0.46 >More info 0.62 >More info Uninduced Original data GEO bulk
130 sni1 0.47 >More info 0.61 >More info WT Original data GEO bulk
131 hira-root -0.46 >More info -0.62 >More info WT-root root Original data
132 atmyc2 cop1 Seedling Dark 0.62 >More info 0.45 >More info WT Seedling Dark Original data GEO bulk
133 WT 3h -P 0.56 >More info 0.51 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
134 hrpA 7h 0.54 >More info 0.53 >More info Mock 7h hrpA Original data GEO bulk
135 10mM sucrose -0.62 >More info -0.45 >More info control Whole seedling Original data GEO bulk
136 P.syringae AvrRpt2 4 h (leaf) 0.47 >More info 0.60 >More info Mock 4 h (leaf) Original data Elicitor treatments
137 TNT-seedlings 0.36 >More info 0.71 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
138 Atwrky63 -0.62 >More info -0.44 >More info Col0 none leaf Original data GEO bulk
139 csn5 (csn5a-2 csn5b) dark 0.63 >More info 0.43 >More info WT dark Original data GEO bulk
140 bbx24 in Simulated Shade -0.60 >More info -0.46 >More info WT in simulated shade shade seedling Original data
141 gh3.5-1D 48 hpi 0.57 >More info 0.49 >More info Col-0 uninoculated Original data GEO bulk
142 cop1 Seedling BL+ABA 0.64 >More info 0.42 >More info WT Seedling BL+ABA Original data GEO bulk
143 UV 0.66 >More info 0.40 >More info WT aerial region Original data GEO bulk
144 ARR21C-ox 0.58 >More info 0.48 >More info Col-0 Original data ARR21C overexpression
145 WT cold 12 h 0.55 >More info 0.51 >More info WT cold 0h GSM955987 seedlings Original data GEO bulk
146 Mutant axr3-1 (IAA) 0.45 >More info 0.61 >More info Col (IAA) Original data GEO bulk
147 Col-0 V. longisporum-inoculated 48 hpi 0.46 >More info 0.60 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
148 WT +elf18 2h 0.50 >More info 0.55 >More info WT untreated elf18 Original data GEO bulk
149 ahg2-1sid2-2 0.53 >More info 0.52 >More info WT (Col) control Original data GEO bulk
150 vtc2 (I) 0.54 >More info 0.51 >More info Col (I) rosette Original data GEO bulk
151 Sulfometuron EC50 0.53 >More info 0.52 >More info Carrier Original data GEO bulk
152 eds16 whole leaf 3dpi -0.32 >More info -0.73 >More info Col whole leaf 3dpi whole leaf Original data GEO bulk
153 Compost 0.57 >More info 0.47 >More info Perlite Compost Original data GEO bulk
154 seedlings-week-old RECA1-overexpressing
transgenic		 0.52 >More info 0.52 >More info seedlings-week-old Col-0 seedlings Original data
155 coi1-2 0.49 >More info 0.55 >More info Col-0 mock Whole seedling Original data GEO bulk
156 0.125 mM gold 24 h 0.48 >More info 0.56 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
157 WT 2-4h Xanthomonas 0.45 >More info 0.59 >More info WT T0 Original data GEO bulk
158 root Dosed gold 0.48 >More info 0.56 >More info root No gold .125 mM gold 24 h roots Original data
159 4C 7d 0.60 >More info 0.43 >More info 4C 0h Original data GEO bulk
160 pepr1-1 Pepr2-3 +Pep2 10h -0.54 >More info -0.49 >More info WT +Pep2 10h Pep2 Original data GEO bulk
161 bio4-1 mutant leaves 0.62 >More info 0.41 >More info WT leaves leaves Original data GEO bulk
162 Col-0-avrB-6h 0.51 >More info 0.52 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
163 GR-REV 60min 0.62 >More info 0.41 >More info Col 60min Original data GEO bulk
164 ice1 3H Cold 0.49 >More info 0.54 >More info WT 3H Cold Original data GEO bulk
165 Selenate (root) 0.53 >More info 0.49 >More info Ws (root) Original data GEO bulk
166 Root Selenate 0.53 >More info 0.49 >More info Root control 40 micromolar selenate Root Original data GEO bulk
167 ataf1-1 mutant Col-0 Bgh inoculated 0.50 >More info 0.52 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
168 csn4-1 dark 0.56 >More info 0.46 >More info WT light Original data GEO bulk
169 IAA7mII over-expressor IAA Treated 0.33 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
170 Whole root - low pH 12H 0.44 >More info 0.58 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
171 pmr5 pmr6 0.44 >More info 0.58 >More info Col-0 Original data GEO bulk
172 A6 mutant 0.58 >More info 0.43 >More info WT rosette leaves Rosette leaves Original data GEO bulk
173 pnp1-1 1wk -P 0.53 >More info 0.48 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
174 cat2-2; 8h switch to ambient CO2 concentrations; 0.58 >More info 0.43 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
175 camta3-2 0.48 >More info 0.53 >More info WT Original data GEO bulk
176 root - 08% oxygen - 2h -0.29 >More info -0.72 >More info root - 21% oxygen - 2h Original data GEO bulk
177 20h Col-0 0.40 >More info 0.61 >More info 00h Col-0 Original data GEO bulk
178 Cocultivation 8 hrs root 0.42 >More info 0.59 >More info Mock cocultivation 8 hrs root Root Original data
179 Col whole leaf 7dpi 0.50 >More info 0.50 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
180 8-DAC chr11-1chr17-1 0.50 >More info 0.50 >More info 8-DAC Col-0 leaf explants Original data
181 RPL18 TuMV inoculated total RNA 0.55 >More info 0.45 >More info mock inoculated total RNA PO Original data GEO bulk
182 elf3-7-23ºC -0.55 >More info -0.45 >More info WT-23ºC Original data GEO bulk
183 til1-1 22C 0.41 >More info 0.59 >More info Col-0 22C Original data GEO bulk
184 OXUPB1-2 meristematic zone 0.45 >More info 0.55 >More info Col-0 meristematic zone Seedling root meristem zone Original data GEO bulk
185 ORS1 induced 0.48 >More info 0.52 >More info mock-induced rosette leaves Original data GEO bulk
186 16h Col-0 0.46 >More info 0.54 >More info 00h Col-0 Original data GEO bulk
187 irradiated leaf (WT 1d) 0.49 >More info 0.51 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
188 WT+H2O2 0.47 >More info 0.53 >More info WT H2O2 Original data GEO bulk
189 Col-0 Root 100 mM ATP 30 min 0.52 >More info 0.47 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
190 upf1 0.56 >More info 0.43 >More info WT whole plant Original data GEO bulk
191 E.coli TUV86 2 fliC 7h 0.58 >More info 0.41 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
192 35S::ERF104 H2O 4h 0.58 >More info 0.41 >More info Col-0 H2O 4h Original data GEO bulk
193 ANAC102 knock-out -0.52 >More info -0.47 >More info Col-0 Original data GEO bulk
194 9 hr Hypoxia Total RNA 0.57 >More info 0.42 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
195 vtc1 (II) 0.54 >More info 0.45 >More info Col (II) rosette Original data GEO bulk
196 Cold Stress 24 h (root) 0.55 >More info 0.44 >More info Stress mock 24 h (root) Original data Stress treatments
197 SLWF infested 0.52 >More info 0.47 >More info SLWF uninfested rosette tissue Original data GEO bulk
198 ARR22-ox (t-zeatin 3 h) 0.55 >More info 0.44 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
199 arf2 brz -0.40 >More info -0.59 >More info arf2 mock Original data GEO bulk
200 8hr-pH4.5 0.42 >More info 0.57 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
201 sid2 -0.38 >More info -0.61 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
202 camta1/2/3 warm 0.47 >More info 0.52 >More info WT warm entire aerial part Original data GEO bulk
203 NahG -0.49 >More info -0.50 >More info Col-0 Leaves Original data GEO bulk
204 apum23 0.58 >More info 0.40 >More info WT (Col-3) aerial parts Original data GEO bulk
205 Salicylic Acid 3 h 0.50 >More info 0.48 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
206 csn3-1 dark 0.59 >More info 0.39 >More info WT dark Original data GEO bulk
207 D2O 0.45 >More info 0.53 >More info H2O seedling Original data GEO bulk
208 Rose Bengal 0.5 uM 0.35 >More info 0.63 >More info Control RB and PER Rose Bengal Original data
209 46T-Dry 0.33 >More info 0.65 >More info WT-Dry dehydration treatment 1h Original data
210 Kas2 roots 2hr KNO3 nitrogen 0.52 >More info 0.45 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
211 spx1 spx2 complete 0.51 >More info 0.46 >More info WT complete seedlings Original data
212 seedlings protease IV 0.51 >More info 0.46 >More info seedlings nontreated control whole seedling Original data
213 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.50 >More info 0.47 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
214 spch 0.52 >More info 0.45 >More info Col-0 WT whole seedling Original data GEO bulk
215 3d old, both 10mM sucrose and 0.2µM SMX -0.52 >More info -0.45 >More info control Whole seedling Original data GEO bulk
216 WT +Pep2 2h 0.62 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
217 A. lyrata -0.54 >More info -0.43 >More info A. thaliana mature leaves before flowering Original data GEO bulk
218 seedlings + TSA 0.59 >More info 0.38 >More info control seedlings 10-day old whole seedling Original data GEO bulk
219 Te ozone 0.46 >More info 0.51 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
220 Col whole leaf 5 dpi 0.40 >More info 0.57 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
221 HARAP aerobic -0.34 >More info -0.63 >More info WT aerobic aerobic Original data GEO bulk
222 efr-1 +elf18 10h -0.47 >More info -0.50 >More info WT +elf18 10h elf18 Original data GEO bulk
223 sta1 0.60 >More info 0.36 >More info WT Original data GEO bulk
224 E.coli 0157 H7 7h 0.67 >More info 0.29 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
225 lht1 untreated 0.54 >More info 0.42 >More info WT untreated untreated leaf Original data GEO bulk
226 root longitudinal zone-4 pH 4.6 0.34 >More info 0.62 >More info root longitudinal zone-4 pH 5.7 Original data GEO bulk
227 Cor hrpS 10h 0.44 >More info 0.52 >More info Mock 10h Cor hrpS Original data GEO bulk
228 root protoplasts 40 mM NaCl 0.39 >More info 0.57 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
229 SCR 48hr-S 0.43 >More info 0.53 >More info SCR 0hr endodermis Original data
230 Leafminer damaged seedlings 0.39 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
231 35S:RPS4 eds1-2 8h -0.40 >More info -0.55 >More info 35S:RPS4 8h leaves Original data
232 cpr5npr1 0.54 >More info 0.41 >More info WT(COL) Original data GEO bulk
233 AtGATA2ox 0.53 >More info 0.42 >More info Col seedling Original data GEO bulk
234 phyB mutant 22C 10hrs -0.29 >More info -0.66 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
235 ckh1 CK200 0.42 >More info 0.53 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
236 Cor 10h 0.38 >More info 0.57 >More info Mock 10h Cor Original data GEO bulk
237 Botrytis cinerea 48h 0.34 >More info 0.61 >More info control 48h Original data GEO bulk
238 INA 0.37 >More info 0.58 >More info CK INA seedling Original data
239 Nicotinamide-85hr 0.54 >More info 0.40 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
240 Nicotinamide-93hr 0.51 >More info 0.43 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
241 lht1 PstDC3000 48h 0.53 >More info 0.41 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
242 coi1-16 ein2 sid2 ozone 0.52 >More info 0.42 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
243 P.syringae vir 4 h (leaf) 0.50 >More info 0.44 >More info Mock 4 h (leaf) Original data Elicitor treatments
244 GA 0.41 >More info 0.53 >More info none GA Rosette Original data GEO bulk
245 pad4-PsmES4326-24hpi -0.56 >More info -0.37 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
246 camta1/2/3 24h cold 0.43 >More info 0.50 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
247 BLM 0.55 >More info 0.37 >More info CK BLM seedling Original data
248 eds16 whole leaf 5dpi -0.38 >More info -0.54 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
249 inhibitor B Treated 0.38 >More info 0.54 >More info Negative Control Original data GEO bulk
250 35:SUB1C -0.39 >More info -0.53 >More info WT whole seedling Original data GEO bulk
251 Total RNA 35S:HF-RPL18 0.40 >More info 0.52 >More info Total RNA csp1 12h non-stress rosettes Original data GEO bulk
252 Kas2 roots 2hr KCl control 0.50 >More info 0.42 >More info Col0 roots 2hr KCl control root Original data GEO bulk
253 Anoxia 0.41 >More info 0.51 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
254 4C 7d(SOIL) 0.41 >More info 0.51 >More info 4C 0h(SOIL) Original data GEO bulk
255 ein2-1 9 hpi A. brassicicola 0.42 >More info 0.50 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
256 Nicotinamide-65hr 0.55 >More info 0.36 >More info WT-untreated-65hr nicotinamide aerial tissue Original data GEO bulk
257 Col-0 SA 0.35 >More info 0.56 >More info Col-0 Original data GEO bulk
258 abi1 hypocotyl 0.35 >More info 0.56 >More info Ler hypocotyl hypocotyl Original data GEO bulk
259 ani1 T0.5 -0.39 >More info -0.52 >More info WT T0.5 root tissue Original data GEO bulk
260 wrky33 Bc inoculation 14h 0.50 >More info 0.41 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
261 seedling 1.5h after Gamma WT 0.50 >More info 0.41 >More info seedling day 1 unirradiated WT 1.5h Original data
262 pad4-est1b-1-doublemutant 0.41 >More info 0.50 >More info pad4-mutant developed rosette leaves Original data GEO bulk
263 Mutant sav3-2 (SH) 0.35 >More info 0.55 >More info Col-0 (SH) Original data GEO bulk
264 sav3-2 shade 0.35 >More info 0.55 >More info Col-0 shade seedlings Original data GEO bulk
265 SCR 72hr-S 0.37 >More info 0.53 >More info SCR 0hr endodermis Original data
266 nia1nia2noa1-2 0.57 >More info 0.33 >More info Col-0 whole seedlings Original data GEO bulk
267 Shoot -P -0.56 >More info -0.33 >More info Shoot Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
268 arp6-10 24h at 27 ºC 0.62 >More info 0.27 >More info Col-0 24h at 27 ºC whole seedlings Original data GEO bulk
269 atmospheric CO2 low Mg shoot 0.54 >More info 0.35 >More info atmospheric CO2 normal Mg shoot Shoot Original data
270 Mutant sav3-2 (WL) 0.24 >More info 0.65 >More info Col-0 (WL) Original data GEO bulk
271 WT Col-0 Bgh inoculated 0.39 >More info 0.50 >More info WT Col-0 Un-inoculated Original data GEO bulk
272 rosette Dark Wounded 0.37 >More info 0.52 >More info rosette Dark Control Original data GEO bulk
273 root hypoxia pGL2 0.38 >More info 0.51 >More info root hypoxia total hypoxia root Original data GEO bulk
274 scrm-D 0.36 >More info 0.53 >More info Col-0 WT whole seedling Original data GEO bulk
275 sav3-2 light 0.24 >More info 0.65 >More info Col-0 light seedlings Original data GEO bulk
276 SCR 24hr-S 0.39 >More info 0.50 >More info SCR 0hr endodermis Original data
277 wrky72-1-NOCO2 INFECTED 0.38 >More info 0.50 >More info WT-NOCO2 INFECTED Original data GEO bulk
278 9m.KCl 0.36 >More info 0.52 >More info To. KCl 14 day old Roots Original data GEO bulk
279 bri1-116 0.15 >More info 0.73 >More info Col seedling Original data GEO bulk
280 mil4 BTH 0.37 >More info 0.51 >More info Col BTH rosettes Original data GEO bulk
281 psae1-3 stn7-1 0.59 >More info 0.28 >More info WS rosette leaves Original data GEO bulk
282 nia1nia2 0.51 >More info 0.36 >More info Col-0 whole seedlings Original data GEO bulk
283 edr1 18 h powdery mildew 0.37 >More info 0.50 >More info Col-0 18 h powdery mildew Original data GEO bulk
284 arp6-10 12 ºC 0.34 >More info 0.52 >More info Col-0 12 ºC whole seedlings Original data GEO bulk
285 seedling 12h after HZE WT 0.31 >More info 0.55 >More info seedling day 1 unirradiated WT 12h Original data
286 seedling -S Exp -0.19 >More info -0.67 >More info seedling FN Exp seedling Original data
287 penta Pst DC3000 12hpi 0.50 >More info 0.36 >More info Laer Pst DC3000 12hpi leaf discs Original data GEO bulk
288 toc1-1-89hr 0.76 >More info 0.10 >More info WT-untreated-89hr none seedlings aerial tissue Original data GEO bulk
289 cngc19 -0.60 >More info -0.26 >More info Col-0 root Original data GEO bulk
290 Heat shock optimum 0.21 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
291 Col whole leaf 6hpi 0.51 >More info 0.34 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
292 GST 4 h (leaf) 0.34 >More info 0.51 >More info Mock 4 h (leaf) Original data Elicitor treatments
293 inhibitor A Treated 0.34 >More info 0.51 >More info Negative Control Original data GEO bulk
294 flu over-tAPX 0.31 >More info 0.53 >More info WT Col Original data GEO bulk
295 flu 0.31 >More info 0.53 >More info WT Col Original data GEO bulk
296 npr1 sni1 SA 0.34 >More info 0.50 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
297 35S:RPS4 eds1-2 2h -0.34 >More info -0.50 >More info 35S:RPS4 2h leaves Original data
298 Leafminer systemically damaged thaliana seedlings 0.53 >More info 0.30 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
299 35S::HRE1 Hypoxic -0.29 >More info -0.54 >More info Col-0 wt Hypoxic hypoxic treatment Original data GEO bulk
300 oas-a1.1 Cd 18h 0.31 >More info 0.52 >More info Cd 18h root Root Original data GEO bulk
301 safener treated 0.31 >More info 0.52 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
302 SCR 96hr-S 0.31 >More info 0.52 >More info SCR 0hr endodermis Original data
303 erf104-ko H2O 4h 0.50 >More info 0.32 >More info Col-0 H2O 4h Original data GEO bulk
304 rsa3-1 Na 24h 0.32 >More info 0.50 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
305 Mutant coi1(leaf) -0.50 >More info -0.31 >More info Col-0 (leaf) Original data GEO bulk
306 eds16 whole leaf 0h UI -0.26 >More info -0.55 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
307 phyB mutant 22C 4hrs -0.20 >More info -0.61 >More info L22-4hrs whole plant excluding roots Original data GEO bulk
308 siliques AtHb1 control 0.29 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
309 Laer pretreat GA Flg22 1h 0.10 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
310 sfr3 cold 0.23 >More info 0.58 >More info WT cold All aerial tissue Original data GEO bulk
311 vtc2-1 -0.53 >More info -0.27 >More info Col-0 whole plant Original data GEO bulk
312 root hypoxia pPEP 0.29 >More info 0.51 >More info root hypoxia total hypoxia root Original data GEO bulk
313 nNOS-drought -0.55 >More info -0.24 >More info WT-drought leaf Original data
314 Ts5 roots 2hr KCl control 0.50 >More info 0.28 >More info Col0 roots 2hr KCl control root Original data GEO bulk
315 Heat Recovery 24 h (shoot) 0.23 >More info 0.54 >More info Stress mock 24 h (shoot) Original data Stress treatments
316 sfr6 cold 0.09 >More info 0.68 >More info WT cold All aerial tissue Original data GEO bulk
317 plant (tga2-5-6) 4h control 0.56 >More info 0.20 >More info plant (Col-0) 4h control Original data GEO bulk
318 Mutant tga2_5_6 0.56 >More info 0.20 >More info Col-0 Original data GEO bulk
319 JA 0.26 >More info 0.50 >More info Col-0 mock Whole seedling Original data GEO bulk
320 cpctry 0.20 >More info 0.56 >More info Col Original data GEO bulk
321 Mutant arf2 (etiol) 0.25 >More info 0.50 >More info Col (etiol) Original data GEO bulk
322 arf2 mock 0.25 >More info 0.50 >More info Col mock Original data GEO bulk
323 CLO 4mM 0.54 >More info 0.19 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
324 Infected pft1 leaf 0.18 >More info 0.53 >More info Infected Col-0 leaf F. oxysporum leaf Original data GEO bulk
325 Mutant lwd1_lwd2 0.16 >More info 0.54 >More info Wildtype for phy mutants Original data GEO bulk
326 LWD1 and LWD2 in photoperiod regulation (lwd1lwd2
)		 0.16 >More info 0.54 >More info LWD1 and LWD2 in photoperiod regulation (wt ) Original data GEO bulk
327 SA 24h 0.17 >More info 0.52 >More info EtOH 24h 24hr Original data GEO bulk
328 NJ15 0.12 >More info 0.56 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
329 cat2-long-day 2d -0.50 >More info -0.16 >More info Col0-LD2 transferred to air (400 ppm) for 2 days in long day regime (16h light/8h dark) rosette leaf material Original data GEO bulk
330 WT tZ -0.14 >More info -0.51 >More info WT Original data GEO bulk
331 cngc1-3 -0.56 >More info -0.08 >More info Col-0 root Original data GEO bulk
332 vte2 leaves 120h LT 0.60 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
333 SA 4mM 0.53 >More info 0.10 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
334 root - 08% oxygen - 30min -0.11 >More info -0.52 >More info root - 21% oxygen - 30min Original data GEO bulk
335 Got7 UV 0.02 >More info 0.60 >More info Got7 mock UV seedling Original data
336 QK HS 0.11 >More info 0.51 >More info QK control heat shocked seedling Original data GEO bulk
337 CCA1-ox 6am non-polysomal 0.11 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
338 pab total 0.53 >More info 0.08 >More info WT total seedling shoot/aerial seedling Original data
339 seedling 12h after HZE atm-1 0.08 >More info 0.51 >More info seedling day 1 unirradiated atm-1 12h Original data
340 Elevated CO2 leaf primordia 0.51 >More info 0.07 >More info Ambient CO2 leaf primordia leaf primordia Original data
341 seedling 12h after Gamma atm-1 -0.00 >More info 0.55 >More info seedling day 1 unirradiated atm-1 12h Original data
342 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.58 >More info 0.04 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
343 Shoot apex inflorescence (after bolting) -0.12 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
344 eds16 whole leaf 1dpi 0.01 >More info -0.52 >More info Col whole leaf 1dpi whole leaf Original data GEO bulk
345 Col PSTDC3000 24h 0.59 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
346 seedling h S Exp -0.21 >More info 0.65 >More info seedling -S Exp seedling Original data
347 opr3 OPDA 0.5 h -0.07 >More info 0.50 >More info opr3 0 h Original data GEO bulk
348 -Sulfate 24 h 0.13 >More info -0.54 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
349 seed germinating in countinuous light 24h SL -0.30 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
350 FarRed Light 45min 0.23 >More info -0.54 >More info White Light 45min Original data Light treatments