cat2-long-day 2d

4.0:Analysis result - correlation network

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Module-based correlation network(MCN) centered on cat2-long-day 2d

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List of experiments correlated with "cat2-long-day 2d"

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Score	Experiment	Correlation from cat2-long-day 2d	Correlation to cat2-long-day 2d	Control Experiment	Treatment	Tissue	Link to original data	Experimental Category
1	cat2-long-day 2d	1.00 >More info	1.00 >More info	Col0-LD2	transferred to air (400 ppm) for 2 days in long day regime (16h light/8h dark)	rosette leaf material	Original data	GEO bulk
2	cat2-short-day 4d	0.84 >More info	0.80 >More info	Col0-SD4	transferred to air (400 ppm) for 4 days in short day regime (8h light/16h dark)	rosette leaf material	Original data	GEO bulk
3	cat2-long-day 4d	0.78 >More info	0.84 >More info	Col0-LD4	transferred to air (400 ppm) for 4 days in long day regime (16h light/8h dark)	rosette leaf material	Original data	GEO bulk
4	upf1	-0.56 >More info	-0.72 >More info	WT		whole plant	Original data	GEO bulk
5	sid2	0.47 >More info	0.79 >More info	Col-0-untreated-control	untreated	leaf tissue	Original data	GEO bulk
6	cat2-2; harvested 8h continiously maintained in high CO2;	0.54 >More info	0.68 >More info	WT; harvested 8h continiously maintained in high CO2;		2 whole rosettes	Original data
7	Elevated CO2 AMPLE N DAY	-0.48 >More info	-0.74 >More info	Ambient CO2 AMPLE N DAY		Youngest Most Fully Expanded Leaf	Original data
8	edr1 18 h powdery mildew	-0.58 >More info	-0.60 >More info	Col-0 18 h powdery mildew			Original data	GEO bulk
9	smg7b-1	-0.51 >More info	-0.66 >More info	WT		whole plant	Original data	GEO bulk
10	Elevated CO2 AMPLE N NIGHT	-0.39 >More info	-0.78 >More info	Ambient CO2 AMPLE N NIGHT		Youngest Most Fully Expanded Leaf	Original data
11	upf3	-0.51 >More info	-0.64 >More info	WT		whole plant	Original data	GEO bulk
12	21h-DC3000 avrRpm1	0.47 >More info	0.68 >More info	21h-DC3000		leaves	Original data	GEO bulk
13	sid2-1 cold	0.39 >More info	0.76 >More info	WT cold	3 week cold	entire aerial part	Original data	GEO bulk
14	plant (tga2-5-6) 4h control	-0.53 >More info	-0.60 >More info	plant (Col-0) 4h control			Original data	GEO bulk
15	Mutant tga2_5_6	-0.53 >More info	-0.60 >More info	Col-0			Original data	GEO bulk
16	NahG	0.49 >More info	0.64 >More info	Col-0		Leaves	Original data	GEO bulk
17	DC3000 24h	-0.53 >More info	-0.59 >More info	Mock 24h	DC3000		Original data	GEO bulk
18	smg5-2	-0.46 >More info	-0.65 >More info	WT		whole plant	Original data	GEO bulk
19	eds16 whole leaf 7dpi	0.41 >More info	0.70 >More info	Col whole leaf 7dpi		whole leaf	Original data	GEO bulk
20	Col-0 INA 48h	-0.35 >More info	-0.76 >More info	Col-0 MOCK 48h			Original data	GEO bulk
21	GO5; harvested 8h continiously maintained in high CO2;	0.48 >More info	0.63 >More info	WT; harvested 8h continiously maintained in high CO2;		2 whole rosettes	Original data
22	atgsnor1-3-avrB-6h	0.52 >More info	0.58 >More info	Col-0-avrB-6h	avrB	leaf tissue	Original data	GEO bulk
23	Col whole leaf 1dpi	0.52 >More info	0.58 >More info	Col whole leaf 0h UI		whole leaf	Original data	GEO bulk
24	Light 3day ivd	-0.44 >More info	-0.66 >More info	0h ivd			Original data
25	Col-0 DCA 48h	-0.37 >More info	-0.73 >More info	Col-0 MOCK 48h			Original data	GEO bulk
26	del1-1 mutant 5d uninfected	-0.38 >More info	-0.72 >More info	Col-0 5d uininfected		mature fully expanded leaves	Original data	GEO bulk
27	OE WRKY63.3	-0.53 >More info	-0.56 >More info	OE WRKY40.4	none	leaf	Original data	GEO bulk
28	atgsnor1-1	0.55 >More info	0.53 >More info	Col-0-untreated-control	untreated	leaf tissue	Original data	GEO bulk
29	cs26 short-day	0.51 >More info	0.57 >More info	Leaves-WT-SD		leaf	Original data	GEO bulk
30	eds16 whole leaf 5dpi	0.31 >More info	0.76 >More info	Col whole leaf 5dpi		whole leaf	Original data	GEO bulk
31	bZIP1ko mutant N+Light-	-0.41 >More info	-0.66 >More info	WT-sib N+Light-		whole plant	Original data	GEO bulk
32	eds16 whole leaf 6hpi	0.48 >More info	0.58 >More info	Col whole leaf 6hpi		whole leaf	Original data	GEO bulk
33	seedling -S Exp	0.28 >More info	0.78 >More info	seedling FN Exp		seedling	Original data
34	WT powdery mildew	-0.39 >More info	-0.66 >More info	WT control	inoculation with the powdery mildew pathogen		Original data	GEO bulk
35	Elevated CO2 expanding leaf	-0.47 >More info	-0.58 >More info	Ambient CO2 expanding leaf		expanding leaf	Original data
36	stn7-1	0.52 >More info	0.52 >More info	Col-0		rosette leaves	Original data	GEO bulk
37	tbf1-mock infiltration	0.57 >More info	0.47 >More info	WT-mock infiltration	water for 2 hrs (infiltration into leaves)	mature leaf	Original data	GEO bulk
38	cpr5	-0.41 >More info	-0.63 >More info	WT		seedling	Original data	GEO bulk
39	A. thaliana-A. lyrata hybrid	0.42 >More info	0.62 >More info	A. thaliana		mature leaves before flowering	Original data	GEO bulk
40	21h-DC3000 hrpA	0.29 >More info	0.74 >More info	21h-DC3000		leaves	Original data	GEO bulk
41	downy mildew cotyledons late stage	-0.34 >More info	-0.69 >More info	mock inoculated		Cotyledons	Original data	GEO bulk
42	sid2-2 safener	0.43 >More info	0.60 >More info	safener treated	safener (mefenpyr and isoxadifen)	rosette leaves	Original data	GEO bulk
43	WT-NOCO2 INFECTED	-0.43 >More info	-0.59 >More info	WT-MOCK			Original data	GEO bulk
44	pad2-PsmES4326-24hpi	0.48 >More info	0.54 >More info	Col0-PsmES4326-24hpi	PsmES4326	leaf	Original data	GEO bulk
45	camta1/3 warm	-0.37 >More info	-0.65 >More info	WT warm		entire aerial part	Original data	GEO bulk
46	miR393 flg22 2h	-0.51 >More info	-0.50 >More info	WT 0h		Leaf tissue	Original data	GEO bulk
47	Mutant siz1-3	-0.37 >More info	-0.64 >More info	Col-0			Original data	GEO bulk
48	OH1	-0.40 >More info	-0.61 >More info	Col-0		leaves	Original data	GEO bulk
49	seed germinating in countinuous light 24h SL	0.34 >More info	0.67 >More info	Control for tissue data		seed	Original data	GEO bulk
50	siz1-3 control	-0.37 >More info	-0.64 >More info	Col-0 control			Original data	GEO bulk
51	camta3-2	-0.33 >More info	-0.67 >More info	WT			Original data	GEO bulk
52	CMV-WT	-0.32 >More info	-0.68 >More info	Mock-At		Aerial tissues	Original data	GEO bulk
53	Leaf wounded	-0.40 >More info	-0.59 >More info	Leaf control		vegetative leaf	Original data	GEO bulk
54	46T-Dry	-0.44 >More info	-0.55 >More info	WT-Dry	dehydration treatment 1h		Original data
55	ataf1-1 mutant Col-0 Bgh inoculated	-0.35 >More info	-0.63 >More info	ataf1-1 mutant Col-0 Un-inoculated			Original data	GEO bulk
56	Col ozone 2d	-0.26 >More info	-0.72 >More info	Col clean-air 2d	ozone		Original data	GEO bulk
57	Cor 24h	-0.38 >More info	-0.60 >More info	Mock 24h	Cor		Original data	GEO bulk
58	GA	-0.50 >More info	-0.47 >More info	none	GA	Rosette	Original data	GEO bulk
59	Mutant NahG(leaf)	0.38 >More info	0.59 >More info	Col-0 (leaf)			Original data	GEO bulk
60	46T-CK	-0.31 >More info	-0.66 >More info	WT-CK	none		Original data
61	35S:RPS4 eds1-2 8h	0.31 >More info	0.66 >More info	35S:RPS4 8h		leaves	Original data
62	aox1a:rpoTmp MLD stressed	0.44 >More info	0.53 >More info	WT(Col0) MLD stressed (control aox1a:rpoTmp)		leaf	Original data
63	8h-DC3000 hrpA	-0.50 >More info	-0.46 >More info	8h-DC3000		leaves	Original data	GEO bulk
64	myb3 myb3r4d	-0.39 >More info	-0.57 >More info	Wild type Col0-9d		whole seedlings	Original data	GEO bulk
65	WT-SA	-0.27 >More info	-0.69 >More info	WT-mock spray	1 mM SA for 6 hrs (spray)	mature leaf	Original data	GEO bulk
66	cpr5scv1	-0.34 >More info	-0.62 >More info	WT(COL)			Original data	GEO bulk
67	erf104-ko Flg22 4h	-0.39 >More info	-0.56 >More info	erf104-ko H2O 4h			Original data	GEO bulk
68	prmt5-5	0.50 >More info	0.45 >More info	WT Col continuous light		Aerial tissue	Original data	GEO bulk
69	Light 3day wt	0.28 >More info	0.66 >More info	0h wt			Original data
70	Rsch CA	0.58 >More info	0.36 >More info	Col CA		Leaves	Original data
71	proline	0.53 >More info	0.41 >More info	noneHS			Original data	GEO bulk
72	wavy	-0.31 >More info	-0.63 >More info	WT			Original data	GEO bulk
73	A6 mutant	-0.34 >More info	-0.60 >More info	WT rosette leaves		Rosette leaves	Original data	GEO bulk
74	aba3-1	-0.36 >More info	-0.58 >More info	wt			Original data	GEO bulk
75	S58-2	-0.37 >More info	-0.57 >More info	wt			Original data	GEO bulk
76	cat2-short-day 2d	0.76 >More info	0.17 >More info	Col0-SD2	transferred to air (400 ppm) for 2 days in short day regime (8h light/16h dark)	rosette leaf material	Original data	GEO bulk
77	sid2-PsmES4326-24hpi	0.39 >More info	0.54 >More info	Col0-PsmES4326-24hpi	PsmES4326	leaf	Original data	GEO bulk
78	pmr4-1 control	-0.39 >More info	-0.54 >More info	WT control	uninoculated		Original data	GEO bulk
79	cat2-hCO2	0.58 >More info	0.35 >More info	Col0-hCO2	grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark)	rosette leaf material	Original data	GEO bulk
80	psad1-1 stn7-1	0.52 >More info	0.41 >More info	Col-0		rosette leaves	Original data	GEO bulk
81	miR393 flg22 1h	-0.41 >More info	-0.52 >More info	WT 0h		Leaf tissue	Original data	GEO bulk
82	lht1 untreated	-0.42 >More info	-0.51 >More info	WT untreated	untreated	leaf	Original data	GEO bulk
83	Col ozone 3h	-0.32 >More info	-0.61 >More info	Col clean-air 3h	ozone		Original data	GEO bulk
84	OE WRKY63.3 high light	-0.35 >More info	-0.58 >More info	OE WRKY40.4 high light	high light for 1h at 1000 μE m-2s-1	leaf	Original data	GEO bulk
85	35S:RPS4 eds1-2 24h	0.33 >More info	0.60 >More info	35S:RPS4 24h		leaves	Original data
86	WT chitooctaose	-0.40 >More info	-0.52 >More info	WT water			Original data	GEO bulk
87	Col whole leaf 7dpi	-0.35 >More info	-0.56 >More info	Col whole leaf 7d UI		whole leaf	Original data	GEO bulk
88	npr1 sni1 SA	-0.35 >More info	-0.56 >More info	npr1 sni1 water	salicylic acid	seedling	Original data	GEO bulk
89	BLM+INA	-0.36 >More info	-0.55 >More info	CK	BLM and INA	seedling	Original data
90	-Sulfate 24 h	0.29 >More info	0.62 >More info	Mock 24 h (1500uM sulfate)			Original data	Response to sulfate limitation
91	rsa3-1 Na 24h	-0.33 >More info	-0.58 >More info	WT Na 24h	120 mM NaCl for 24 h	whole seedlings	Original data	GEO bulk
92	Infected pft1 leaf	-0.40 >More info	-0.50 >More info	Infected Col-0 leaf	F. oxysporum	leaf	Original data	GEO bulk
93	apk1 apk2	-0.38 >More info	-0.52 >More info	Col0-control		whole rosette	Original data	GEO bulk
94	Pst-DC3000(avrRpm1)-4hpi	-0.39 >More info	-0.51 >More info	Pst-DC3000-4hpi			Original data	GEO bulk
95	ceh1 mutant	-0.38 >More info	-0.52 >More info	Parent line			Original data
96	vtc1 (II)	-0.32 >More info	-0.58 >More info	Col (II)		rosette	Original data	GEO bulk
97	edr1 0 h powdery mildew	-0.56 >More info	-0.33 >More info	Col-0 0 h powdery mildew			Original data	GEO bulk
98	oxt6 mutant	0.33 >More info	0.56 >More info	WT			Original data	GEO bulk
99	atgsnor1-1-avrB-6h	-0.38 >More info	-0.51 >More info	Col-0-avrB-6h	avrB	leaf tissue	Original data	GEO bulk
100	cpr5	-0.28 >More info	-0.61 >More info	WT(COL)			Original data	GEO bulk
101	sni1	-0.25 >More info	-0.64 >More info	WT			Original data	GEO bulk
102	pmr5	-0.32 >More info	-0.57 >More info	Col-0			Original data	GEO bulk
103	ANAC102 over-expressor	0.33 >More info	0.55 >More info	C24			Original data	GEO bulk
104	35S::ERF104 Flg22 4h	-0.35 >More info	-0.53 >More info	35S::ERF104 H2O 4h			Original data	GEO bulk
105	Leaf systemic	-0.51 >More info	-0.35 >More info	Leaf control		vegetative leaf	Original data	GEO bulk
106	Salicylic Acid 3 h	-0.36 >More info	-0.50 >More info	Mock 3 h			Original data	Effect of other inhibitors on seedlings
107	WT flg22 1h	-0.35 >More info	-0.51 >More info	WT 0h		Leaf tissue	Original data	GEO bulk
108	phyB mutant 22C 10hrs	0.17 >More info	0.69 >More info	L22-10hrs		whole plant excluding roots	Original data	GEO bulk
109	Octopus overexpressor 35SDYG25	-0.19 >More info	-0.66 >More info	WS			Original data	GEO bulk
110	HARAP hypoxic	-0.33 >More info	-0.52 >More info	hypoxic	hypoxia		Original data	GEO bulk
111	Starch sheath 2 days NAA	0.50 >More info	0.35 >More info	Starch sheath T0	Stem starch sheath under NAA in vitro treatment before cell divission	laser capture microdissection	Original data	GEO bulk
112	Methyl Jasmonate 1 h	-0.29 >More info	-0.54 >More info	Mock 1 h			Original data	Basic hormone treatment of seedlings
113	Prohexadione 12 h	-0.22 >More info	-0.61 >More info	Mock 12 h			Original data	Effect of GA inhibitors on seedlings
114	Mutant sav3-2 (SH)	-0.12 >More info	-0.71 >More info	Col-0 (SH)			Original data	GEO bulk
115	sav3-2 shade	-0.12 >More info	-0.71 >More info	Col-0 shade		seedlings	Original data	GEO bulk
116	Col-0 (t-zeatin 3 h)	0.27 >More info	0.55 >More info	Col-0			Original data	Cytokinin treatment of seedlings
117	Mutant coi1(leaf)	0.32 >More info	0.50 >More info	Col-0 (leaf)			Original data	GEO bulk
118	sid2-2 mock	0.30 >More info	0.52 >More info	Col0 mock	DMSO control	rosette leaves	Original data	GEO bulk
119	35S:RPS4 eds1-2 2h	0.24 >More info	0.58 >More info	35S:RPS4 2h		leaves	Original data
120	WT Col-0 Bgh inoculated	-0.31 >More info	-0.50 >More info	WT Col-0 Un-inoculated			Original data	GEO bulk
121	eds16 whole leaf 0h UI	0.17 >More info	0.63 >More info	Col whole leaf 0h UI		whole leaf	Original data	GEO bulk
122	Mutant sav3-2 (WL)	-0.17 >More info	-0.62 >More info	Col-0 (WL)			Original data	GEO bulk
123	mpk6-ko Flg22 4h	-0.26 >More info	-0.53 >More info	mpk6-ko H2O 4h			Original data	GEO bulk
124	Col whole leaf 5dpi	-0.20 >More info	-0.59 >More info	Col whole leaf 0h UI		whole leaf	Original data	GEO bulk
125	RPL18 TuMV inoculated polysomal RNA	-0.23 >More info	-0.56 >More info	mock inoculated polysomal RNA		PO	Original data	GEO bulk
126	sav3-2 light	-0.17 >More info	-0.62 >More info	Col-0 light		seedlings	Original data	GEO bulk
127	Dark 6h hml	0.56 >More info	0.22 >More info	0h hml			Original data
128	Laer pretreat JA Flg22 0h	0.12 >More info	0.66 >More info	Laer pretreat water control		leaf discs	Original data	GEO bulk
129	WT flg22 2h	-0.24 >More info	-0.54 >More info	WT 0h		Leaf tissue	Original data	GEO bulk
130	Mature callus	-0.25 >More info	-0.53 >More info	Young callus		hypocotyls	Original data	GEO bulk
131	pepr1-1 Pepr2-3 +Pep2 2h	0.25 >More info	0.53 >More info	WT +Pep2 2h	Pep2		Original data	GEO bulk
132	Col-0 INA 6d	-0.21 >More info	-0.57 >More info	Col-0 MOCK 6d			Original data	GEO bulk
133	toc1-1-49hr	-0.19 >More info	-0.58 >More info	WT-untreated-49hr	none	seedlings aerial tissue	Original data	GEO bulk
134	Methyl Jasmonate 0.5 h	-0.23 >More info	-0.53 >More info	Mock 0.5 h			Original data	Basic hormone treatment of seedlings
135	Shoot apex inflorescence (after bolting)	0.11 >More info	0.65 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
136	opr3 JA 0.5 h	-0.06 >More info	-0.69 >More info	opr3 0 h			Original data	GEO bulk
137	AvrRpt2 Col-0 6hpi	-0.23 >More info	-0.52 >More info	AvrRpt2 Col-0 0hpi	Infiltration of Psm	mature leaf	Original data
138	FarRed Light 45min	0.03 >More info	0.71 >More info	White Light 45min			Original data	Light treatments
139	Tsu -Fe 48h Shoots	-0.23 >More info	-0.51 >More info	Tsu +Fe 24h Shoots			Original data	GEO bulk
140	S15-118	-0.23 >More info	-0.50 >More info	wt			Original data	GEO bulk
141	Dark 6h wt	0.50 >More info	0.22 >More info	0h wt			Original data
142	chito-octamer	-0.21 >More info	-0.51 >More info	Col Mock			Original data	GEO bulk
143	bak1-3 +Pep2 10h	-0.19 >More info	-0.53 >More info	WT +Pep2 10h	Pep2		Original data	GEO bulk
144	pmr5 pmr6	-0.21 >More info	-0.51 >More info	Col-0			Original data	GEO bulk
145	RPL18 TuMV inoculated total RNA	-0.17 >More info	-0.53 >More info	mock inoculated total RNA		PO	Original data	GEO bulk
146	Mutant siz1-3 (Drought)	-0.19 >More info	-0.51 >More info	Col-0 (Drought)			Original data	GEO bulk
147	vtc2 (I)	-0.20 >More info	-0.50 >More info	Col (I)		rosette	Original data	GEO bulk
148	siz1-3 drought	-0.19 >More info	-0.51 >More info	Col-0 drought			Original data	GEO bulk
149	FLIGHT TAGESB plate6 ROOTS	-0.18 >More info	-0.51 >More info	GROUND CONTROL TAGESB plate6 ROOTS		plant tissue	Original data
150	bri1-116	-0.05 >More info	0.73 >More info	Col		seedling	Original data	GEO bulk
151	toc1-1-57hr	-0.16 >More info	-0.50 >More info	WT-untreated-57hr	none	seedlings aerial tissue	Original data	GEO bulk
152	WT+chitooctaose	-0.16 >More info	-0.50 >More info	WT+water	chitooctaose	seedlings	Original data	GEO bulk
153	cpr5npr1svi1	-0.11 >More info	-0.55 >More info	WT(COL)			Original data	GEO bulk
154	Col whole leaf amplified 5 dpi	-0.03 >More info	-0.61 >More info	Col whole leaf amplified 5d UI		whole leaf	Original data	GEO bulk
155	T8 leaf-drought	0.50 >More info	0.13 >More info	T8 leaf-well watered			Original data	GEO bulk
156	0h ivd	0.04 >More info	0.59 >More info	0h wt			Original data
157	long 17-degree-	-0.04 >More info	-0.59 >More info	control long			Original data	GEO bulk
158	UV Stress 24 h (shoot)	-0.01 >More info	-0.60 >More info	Stress mock 24 h (shoot)			Original data	Stress treatments
159	Protoplast Induced	-0.08 >More info	-0.53 >More info	Uninduced			Original data	GEO bulk
160	Cor 10h	-0.10 >More info	-0.51 >More info	Mock 10h	Cor		Original data	GEO bulk
161	anac017-2 AntimycinA 3h	0.05 >More info	0.55 >More info	WT AntimycinA 3h	3h_AntimycinA		Original data	GEO bulk
162	Dark 2day hml	0.50 >More info	0.10 >More info	0h hml			Original data
163	Red/FR Light45min	0.05 >More info	-0.63 >More info	FarRed Light 45min			Original data	Light treatments
164	Heat shock optimum	-0.09 >More info	0.65 >More info	Heat shock baseline	Photosynthesis at optimum temperature	leaf first fully expanded	Original data	GEO bulk
165	6h volatiles Sp. HRO-C48	-0.04 >More info	-0.51 >More info	6h untreated		whole seedling	Original data	GEO bulk
166	Laer pretreat GA Flg22 1h	-0.18 >More info	0.71 >More info	Laer pretreat water control		leaf discs	Original data	GEO bulk
167	Dark 2day ivd	0.52 >More info	-0.01 >More info	0h ivd			Original data
168	JA 3h	0.02 >More info	-0.53 >More info	EtOH 3h	3hr		Original data	GEO bulk
169	CCA1-ox 6am non-polysomal	0.00 >More info	0.51 >More info	WT 6am non-polysomal		aerial part	Original data
170	Col BTH	-0.17 >More info	0.67 >More info	Col		rosettes	Original data	GEO bulk
171	Leafminer damaged seedlings	-0.06 >More info	0.56 >More info	Healthy seedlings		leaves	Original data	GEO bulk
172	Constans-mutant	0.01 >More info	-0.50 >More info	Col control		above-ground whole plant	Original data	GEO bulk
173	GST 4 h (leaf)	0.06 >More info	-0.51 >More info	Mock 4 h (leaf)			Original data	Elicitor treatments
174	SA 3h	0.13 >More info	-0.56 >More info	EtOH 3h	3hr		Original data	GEO bulk
175	pmr5	-0.52 >More info	0.12 >More info	Col-0		rosette	Original data	GEO bulk
176	Col0-PsmES4326-24hpi	-0.21 >More info	0.61 >More info	Col0-mock-24hpi		leaf	Original data	GEO bulk
177	siliques AtHb1 control	-0.15 >More info	0.52 >More info	siliques WT control	control	silique	Original data	GEO bulk
178	lug3 leaves	-0.50 >More info	0.15 >More info	WT-leaves		matured rosette leaves	Original data	GEO bulk
179	IAA7mII over-expressor IAA Treated	-0.45 >More info	0.69 >More info	empty vector IAA Treated			Original data	GEO bulk