4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Oxidative Stress 3 h (root)
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List of experiments correlated with "Oxidative Stress 3 h (root)"  Help Download transcriptome of top 30
Score Experiment Correlation from
Oxidative Stress 3 h (root)		 Correlation to
Oxidative Stress 3 h (root)		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Oxidative Stress 3 h (root) 1.00 >More info 1.00 >More info Stress mock 3 h (root) Original data Stress treatments
2 AgNO3 3 h -0.65 >More info -0.74 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
3 root Dosed gold -0.69 >More info -0.64 >More info root No gold .125 mM gold 24 h roots Original data
4 0.125 mM gold 24 h -0.69 >More info -0.64 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
5 oas-a1.1 Cd 18h -0.64 >More info -0.68 >More info Cd 18h root Root Original data GEO bulk
6 24h +Pi 0.57 >More info 0.72 >More info 24h -Pi root Original data GEO bulk
7 P.p 30hai -0.62 >More info -0.67 >More info At-Control roots Original data GEO bulk
8 R. solani AG8 -0.67 >More info -0.58 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
9 SA -0.64 >More info -0.60 >More info WT mock Whole seedling Original data GEO bulk
10 aba3-1 -0.50 >More info -0.68 >More info wt Original data GEO bulk
11 B.cinerea 18 h infection -0.48 >More info -0.68 >More info Mock 18 h Original data Botrytis cinerea infection
12 Botrytis cinerea 18h -0.48 >More info -0.68 >More info control 18h Original data GEO bulk
13 P.p 2.5hai -0.58 >More info -0.57 >More info At-Control roots Original data GEO bulk
14 R. solani AG2-1 -0.62 >More info -0.52 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
15 8hr-pH4.5 -0.56 >More info -0.56 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
16 SCL3 OE 0.50 >More info 0.62 >More info Col-0 whole root Original data GEO bulk
17 P.p 10.5hai -0.57 >More info -0.54 >More info At-Control roots Original data GEO bulk
18 Bur-0-3h IAA -0.59 >More info -0.50 >More info Bur-0h IAA whole plant Original data GEO bulk
19 Whole root - low pH 24H -0.51 >More info -0.57 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
20 hira-root 0.51 >More info 0.57 >More info WT-root root Original data
21 root - 04% oxygen - 2h 0.37 >More info 0.71 >More info root - 21% oxygen - 2h Original data GEO bulk
22 ani1 T0.5 0.40 >More info 0.68 >More info WT T0.5 root tissue Original data GEO bulk
23 P.p 6hai -0.58 >More info -0.49 >More info At-Control roots Original data GEO bulk
24 Wounding Stress3 h (root) 0.65 >More info 0.41 >More info Stress mock 3 h (root) Original data Stress treatments
25 Chemically -0.34 >More info -0.72 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
26 S15-118 -0.52 >More info -0.53 >More info wt Original data GEO bulk
27 Chitosan 3h Treatment -0.50 >More info -0.54 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
28 Mutant axr3-1 (IAA) -0.36 >More info -0.68 >More info Col (IAA) Original data GEO bulk
29 Col-0 V. longisporum-inoculated 48 hpi -0.47 >More info -0.56 >More info Col-0 mock 48 hpi Pool of >50 individual roots Original data
30 root cells endodermis 140mM NaCl 3 hours -0.53 >More info -0.49 >More info root cells endodermis standard 1 hour root cells endodermis Original data
31 vte2-1 3d vernalization -0.56 >More info -0.46 >More info WT 3d vernalization Original data GEO bulk
32 Kas-1 -Fe 24h 0.43 >More info 0.59 >More info Kas-1 +Fe 24h roots Original data GEO bulk
33 Kas -Fe 24h Roots 0.43 >More info 0.59 >More info Kas +Fe 24h Roots Original data GEO bulk
34 TNT-seedlings -0.36 >More info -0.65 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
35 Root -Cs -0.38 >More info -0.63 >More info Control-root Original data GEO bulk
36 LTN008-2 aza-dc -0.57 >More info -0.43 >More info LTN012-2 Mock Original data
37 whole roots -Fe 72 hour -0.51 >More info -0.48 >More info whole roots standard Original data GEO bulk
38 Fe starvation 72 h -0.51 >More info -0.48 >More info Control Original data GEO bulk
39 Bur-0-1h IAA -0.53 >More info -0.46 >More info Bur-0h IAA whole plant Original data GEO bulk
40 cpr5npr1svi1 -0.51 >More info -0.47 >More info WT(COL) Original data GEO bulk
41 5-Triiodobenzoic acid3 h -0.60 >More info -0.37 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
42 DFPM -0.56 >More info -0.40 >More info control Original data GEO bulk
43 pepr1-1 Pepr2-3 +Pep2 2h 0.52 >More info 0.44 >More info WT +Pep2 2h Pep2 Original data GEO bulk
44 C24-3h IAA -0.53 >More info -0.43 >More info C24-0h IAA whole plant Original data GEO bulk
45 S58-2 -0.53 >More info -0.42 >More info wt Original data GEO bulk
46 root cells endodermis 140mM NaCl 8 hours -0.51 >More info -0.44 >More info root cells endodermis standard 1 hour root cells endodermis Original data
47 Mutant siz1-3 (Drought) -0.52 >More info -0.43 >More info Col-0 (Drought) Original data GEO bulk
48 whole roots -Fe 48 hour -0.53 >More info -0.42 >More info whole roots standard Original data GEO bulk
49 siz1-3 drought -0.52 >More info -0.43 >More info Col-0 drought Original data GEO bulk
50 shoot hypoxia p35S -0.42 >More info -0.53 >More info shoot hypoxia total Original data GEO bulk
51 roots IAA -0.38 >More info -0.57 >More info roots mock Original data GEO bulk
52 M6PR transgenic leaf 100mM NaCl 0.41 >More info 0.53 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
53 seedlings +5AC -0.53 >More info -0.40 >More info control seedlings 10-day old whole seedling Original data GEO bulk
54 seedlings-week-old RECA1-overexpressing
transgenic		 -0.53 >More info -0.40 >More info seedlings-week-old Col-0 seedlings Original data
55 vtc1 (II) -0.51 >More info -0.42 >More info Col (II) rosette Original data GEO bulk
56 upf3 -0.57 >More info -0.36 >More info WT whole plant Original data GEO bulk
57 9m.KCl -0.41 >More info -0.51 >More info To. KCl 14 day old Roots Original data GEO bulk
58 msh1 albino -0.52 >More info -0.39 >More info WT aerial part Original data GEO bulk
59 pepr1-1 Pepr2-3 +Pep2 10h 0.56 >More info 0.35 >More info WT +Pep2 10h Pep2 Original data GEO bulk
60 AtLysM RLK1 mutant water -0.36 >More info -0.55 >More info WT water Original data GEO bulk
61 csn5 (csn5a-2 csn5b) light -0.50 >More info -0.41 >More info WT light Original data GEO bulk
62 GR-REV 30min -0.52 >More info -0.37 >More info Col 30min Original data GEO bulk
63 Mature callus -0.50 >More info -0.39 >More info Young callus hypocotyls Original data GEO bulk
64 9m.KNO3 -0.39 >More info -0.50 >More info To. KNO3 14 day old Roots Original data GEO bulk
65 rsa3-1 Na 24h -0.38 >More info -0.51 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
66 cs26 long day -0.56 >More info -0.32 >More info Leaves-WT-LD leaf Original data GEO bulk
67 upf1 -0.53 >More info -0.35 >More info WT whole plant Original data GEO bulk
68 ein2-1 9 hpi A. brassicicola -0.51 >More info -0.37 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
69 smg7b-1 -0.37 >More info -0.51 >More info WT whole plant Original data GEO bulk
70 root cells epidermis 140mM NaCl 48 hours -0.51 >More info -0.36 >More info root cells epidermis standard 1 hour root cells epidermis Original data
71 del1-1 mutant 5d uninfected -0.55 >More info -0.31 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
72 C24-1h IAA -0.53 >More info -0.33 >More info C24-0h IAA whole plant Original data GEO bulk
73 seed germinating in countinuous light 24h SL 0.19 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
74 root cells epidermis 140mM NaCl 8 hours -0.50 >More info -0.36 >More info root cells epidermis standard 1 hour root cells epidermis Original data
75 Genotoxic Stress 3 h (root) 0.56 >More info 0.29 >More info Stress mock 3 h (root) Original data Stress treatments
76 Col whole leaf 7dpi -0.51 >More info -0.34 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
77 cat2-2; harvested 8h continiously maintained in
high CO2;		 0.51 >More info 0.34 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
78 oligomycin 1 h -0.52 >More info -0.33 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
79 Mutant axr3-1 -0.30 >More info -0.55 >More info Col Original data GEO bulk
80 sid2 0.32 >More info 0.53 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
81 bbx24 in Simulated Shade 0.59 >More info 0.26 >More info WT in simulated shade shade seedling Original data
82 Fenclorim 4hr -0.56 >More info -0.28 >More info Acetone 4hr root Original data GEO bulk
83 oligomycin 4 h -0.50 >More info -0.33 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
84 ABA DFPM -0.56 >More info -0.27 >More info control Original data GEO bulk
85 WT Bc inoculation 14h -0.55 >More info -0.27 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
86 sta1 -0.31 >More info -0.51 >More info WT Original data GEO bulk
87 bak1-3 +Pep2 10h -0.55 >More info -0.25 >More info WT +Pep2 10h Pep2 Original data GEO bulk
88 cs26 short-day 0.50 >More info 0.30 >More info Leaves-WT-SD leaf Original data GEO bulk
89 Salicylic Acid 3 h -0.28 >More info -0.52 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
90 Selenate (root) -0.28 >More info -0.52 >More info Ws (root) Original data GEO bulk
91 Root Selenate -0.28 >More info -0.52 >More info Root control 40 micromolar selenate Root Original data GEO bulk
92 camta3-2 -0.52 >More info -0.27 >More info WT Original data GEO bulk
93 Shoot apex inflorescence (after bolting) 0.14 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
94 root - 08% oxygen - 48h 0.19 >More info 0.60 >More info root - 21% oxygen - 48h Original data GEO bulk
95 root stele pH4.6 -0.29 >More info -0.50 >More info root stele pH5.7 Original data GEO bulk
96 grf1/grf2/grf3 -0.29 >More info -0.50 >More info WS Original data GEO bulk
97 WT (Ler) CK25 0.13 >More info 0.65 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
98 camta3-1 -0.54 >More info -0.23 >More info WT Original data GEO bulk
99 wrky33 Bc inoculation 14h -0.51 >More info -0.26 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
100 Col-0 9 hpi A. brassicicola -0.52 >More info -0.25 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
101 bri1-116 0.03 >More info 0.73 >More info Col seedling Original data GEO bulk
102 35S:RPS4 eds1-2 2h 0.21 >More info 0.55 >More info 35S:RPS4 2h leaves Original data
103 IRP1-OE-Ctrl--shoot -0.55 >More info -0.20 >More info COL-0-Ctrl--shoot shoot Original data
104 root - 04% oxygen - 48h 0.25 >More info 0.50 >More info root - 21% oxygen - 48h Original data GEO bulk
105 tmm1-inflorescence-tips -0.22 >More info -0.53 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
106 AvrRpm1 2 h (leaf) -0.52 >More info -0.22 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
107 CHS-silenced type 0.54 >More info 0.19 >More info anthocyanin-producing revertants total tissue Original data GEO bulk
108 nia1nia2noa1-2 -0.52 >More info -0.21 >More info Col-0 whole seedlings Original data GEO bulk
109 P. infestans 6 h (leaf) -0.54 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
110 35S:ATR1 like miR 0.13 >More info 0.55 >More info WT for miR Original data GEO bulk
111 Col in Pi deficiency medium -0.09 >More info -0.59 >More info Col in control medium root Original data GEO bulk
112 OE WRKY40.4 high light -0.52 >More info -0.15 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
113 Salt Stress 24 h (root) -0.53 >More info -0.14 >More info Stress mock 24 h (root) Original data Stress treatments
114 cpctry -0.15 >More info -0.51 >More info Col Original data GEO bulk
115 estradiole-induced ANAC059 -0.03 >More info -0.60 >More info transgenic (empty vector inducible system) Original data GEO bulk
116 phyB mutant 22C 4hrs 0.06 >More info 0.56 >More info L22-4hrs whole plant excluding roots Original data GEO bulk
117 xyl-grown cell culture- 1h 1mM Suc -0.10 >More info -0.52 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
118 pnp1-1 1wk -P -0.52 >More info -0.05 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
119 IAA7mII over-expressor IAA Treated -0.12 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
120 tga1 tga4 2h KCl -0.00 >More info 0.55 >More info Col 0 2h KCl 5 mM KCl root Original data GEO bulk
121 ptpks2 0.05 >More info -0.57 >More info Col-WT leaves Original data GEO bulk
122 Heat shock optimum -0.15 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
123 CCA1-ox 6am non-polysomal -0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
124 glk1 glk2 GLK1-GR +DEX 24h 0.52 >More info -0.03 >More info glk1 glk2 GLK1-GR mock 24h dexamethasone whole seedlings Original data GEO bulk
125 siliques AtHb1 control -0.07 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
126 Col BTH -0.23 >More info 0.67 >More info Col rosettes Original data GEO bulk
127 PNO8 3 h -0.51 >More info 0.10 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
128 myb3 myb3r4d -0.51 >More info 0.10 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
129 Laer pretreat GA Flg22 1h -0.31 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
130 SA 4mM -0.54 >More info 0.17 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
131 vtc2-1 0.58 >More info -0.23 >More info Col-0 whole plant Original data GEO bulk
132 Roots Cd 0.50 >More info -0.17 >More info Roots control Cd Root Original data GEO bulk
133 WT +Pep2 2h -0.53 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
134 Col0-PsmES4326-24hpi -0.44 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
135 Leafminer damaged seedlings -0.43 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk