4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on chl1-5 Nitrate 0.5h
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List of experiments correlated with "chl1-5 Nitrate 0.5h"
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Score
Experiment
Correlation from
chl1-5 Nitrate 0.5h
Correlation to
chl1-5 Nitrate 0.5h
Control Experiment
Genotype
Treatment
Tissue
Link to
original data
Experimental
Category
Data set
Details
1
chl1-5 Nitrate 0.5h
1.00
>More info
1.00
>More info
WT Nitrate 0.5h
Original data
GEO bulk
2
250uM K-nitrate 20min roots
-0.68
>More info
-0.78
>More info
250uM KCl 20min roots
Roots
Original data
GEO bulk
3
Split KNO3 roots - 2hours
-0.60
>More info
-0.79
>More info
Split KCl roots - 2hours
5mM KNO3 on ONE side for 2 hours
roots
Original data
GEO bulk
4
Ws 2h KNO3
-0.62
>More info
-0.72
>More info
Ws 2h KCl
2 hours of 5 mM KNO3
Arabidopsis root
Original data
GEO bulk
5
WT Nitrate 0.5h
-0.57
>More info
-0.76
>More info
WT untreated
Original data
GEO bulk
6
Split KNO3 roots - 8hours
-0.53
>More info
-0.74
>More info
Split KCl roots - 8hours
5mM KNO3 on ONE side for 8 hours
roots
Original data
GEO bulk
7
Col 0 2h KNO3
-0.50
>More info
-0.75
>More info
Col 0 2h KCl
5 mM KNO3
root
Original data
GEO bulk
8
8 hr nitrate
-0.74
>More info
-0.50
>More info
immediately prior to nitrogen addtion
roots from hydroponically grown plants
Original data
GEO bulk
9
20m.KNO3
-0.61
>More info
-0.61
>More info
To.
KNO3
14 day old Roots
Original data
GEO bulk
10
1.5 hr nitrate
-0.57
>More info
-0.64
>More info
immediately prior to nitrogen addtion
roots from hydroponically grown plants
Original data
GEO bulk
11
Split KNO3 roots - 2days
-0.54
>More info
-0.64
>More info
Split KCl roots - 2days
5mM KNO3 on ONE side for 2 days
roots
Original data
GEO bulk
12
2hr continuous KNO3 and MSX PeR cell
-0.46
>More info
-0.71
>More info
2hr continuous KCl and MSX control PeR cell
Pericycle root cells
Original data
GEO bulk
13
Ibuprofen 3 h
0.56
>More info
0.47
>More info
Mock 3 h
Original data
Effect of other inhibitors on seedlings
14
Laer pretreat GA Flg22 1h
0.31
>More info
0.71
>More info
Laer pretreat water control
leaf discs
Original data
GEO bulk
15
250uM KNO3 20min shoots
-0.43
>More info
-0.59
>More info
250uM KCL 20min shoots
shoots
Original data
GEO bulk
16
Var2-1 roots 2hr KNO3 nitrogen
0.68
>More info
0.33
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Col0 roots 2hr KNO3 nitrogen
root
Original data
GEO bulk
17
2hr continuous KNO3 ECR cell
-0.35
>More info
-0.65
>More info
2hr KCl control ECR cell
Epidermis&Cortex root cells
Original data
GEO bulk
18
Control KNO3 roots - 2hours
-0.50
>More info
-0.48
>More info
Control KCl roots - 2hours
5mM KNO3 on both sides for 2 hours
roots
Original data
GEO bulk
19
2h KNO3 Whole root
-0.73
>More info
-0.23
>More info
2h KCl control Whole root
Whole root
Original data
GEO bulk
20
2hr continuous KNO3 PrR cell
-0.31
>More info
-0.54
>More info
2hr KCl control PrR cell
Protoplasted root cells
Original data
GEO bulk
21
bri1-116
0.11
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0.73
>More info
Col
seedling
Original data
GEO bulk
22
2hr transitory KNO3 ECR cell
-0.09
>More info
-0.75
>More info
2hr KCl control ECR cell
Epidermis&Cortex root cells
Original data
GEO bulk
23
2hr continuous KNO3 EPR cell
-0.26
>More info
-0.58
>More info
2hr KCl control EPR cell
Endodermis&Pericycle root cells
Original data
GEO bulk
24
phyABDE 4-day dark- 2 hours Rc50
-0.54
>More info
-0.29
>More info
phyABDE Dark
4-day dark growth followed by 2 hours of red light
whole seedling
Original data
GEO bulk
25
P.p 30hai
0.50
>More info
0.33
>More info
At-Control
roots
Original data
GEO bulk
26
Shoot apex inflorescence (after bolting)
0.16
>More info
0.65
>More info
Control for tissue data
Original data
Developmental series; organs / tissues at different ages
27
siliques AtHb1 control
0.29
>More info
0.52
>More info
siliques WT control
control
silique
Original data
GEO bulk
28
Root P recovery
-0.68
>More info
-0.10
>More info
Root -P
Recovery 10-day Phosphate starvation then transferred to full-strength MGRL medium for 3 days
Original data
GEO bulk
29
anac017-1 AntimycinA 3h
-0.66
>More info
-0.12
>More info
WT AntimycinA 3h
3h_AntimycinA
Original data
GEO bulk
30
ptpks2
-0.17
>More info
-0.54
>More info
Col-WT
leaves
Original data
GEO bulk
31
24h +Pi
-0.54
>More info
-0.16
>More info
24h -Pi
root
Original data
GEO bulk
32
Var2-1 roots 2hr KCl control
0.50
>More info
0.20
>More info
Col0 roots 2hr KCl control
root
Original data
GEO bulk
33
P35S:rGRF1
-0.51
>More info
-0.18
>More info
Col-0
Original data
GEO bulk
34
BAM8-N Ox untreated
-0.59
>More info
-0.10
>More info
WT untreated
none
shoot
Original data
35
axr1 hypocotyl
-0.54
>More info
-0.14
>More info
wt hypocotyl
hypocotyl
Original data
GEO bulk
36
ABI3GR +DEX +CHX
0.55
>More info
0.13
>More info
ABI3GR -DEX +CHX
DEX CHX
root/protoplasts
Original data
GEO bulk
37
root cells endodermis 140mM NaCl 1 hour
0.53
>More info
0.14
>More info
root cells endodermis standard 1 hour
root cells endodermis
Original data
38
phyABCDE 4-day dark- 2 hours Rc50
-0.68
>More info
0.01
>More info
phyABCDE Dark
4-day dark growth followed by 2 hours of red light
whole seedling
Original data
GEO bulk
39
Col whole leaf 3dpi
0.57
>More info
0.10
>More info
Col whole leaf 0h UI
whole leaf
Original data
GEO bulk
40
Ts5 roots 2hr KCl control
0.50
>More info
0.16
>More info
Col0 roots 2hr KCl control
root
Original data
GEO bulk
41
root hypoxia pSCR
0.60
>More info
0.06
>More info
root hypoxia total
hypoxia
root
Original data
GEO bulk
42
scl3
0.62
>More info
0.03
>More info
Col-0
whole root
Original data
GEO bulk
43
Heat shock optimum
-0.00
>More info
0.65
>More info
Heat shock baseline
Photosynthesis at optimum temperature
leaf first fully expanded
Original data
GEO bulk
44
Root wt CLE10
0.57
>More info
0.08
>More info
Root wt CLE25
root tip
Original data
GEO bulk
45
1hr-pH4.5
-0.51
>More info
-0.13
>More info
1hr-pH6
1hr pH 4.5
roots
Original data
GEO bulk
46
Root -P
0.57
>More info
0.07
>More info
Root Mock
P_starvation 10-day Phosphate starvation
Original data
GEO bulk
47
Al treated
0.56
>More info
0.07
>More info
control
Original data
GEO bulk
48
3m.KCl
0.52
>More info
0.11
>More info
To.
KCl
14 day old Roots
Original data
GEO bulk
49
6m.KCl
0.55
>More info
0.08
>More info
To.
KCl
14 day old Roots
Original data
GEO bulk
50
PNO8 3 h
0.50
>More info
0.13
>More info
Mock 3 h
Original data
Effect of other inhibitors on seedlings
51
SHR-GR Time 3H Dex
-0.11
>More info
-0.52
>More info
SHR-GR Time 0H Dex
Dex media for 3 hours
Original data
GEO bulk
52
IAA7mII over-expressor IAA Treated
-0.06
>More info
0.69
>More info
empty vector IAA Treated
Original data
GEO bulk
53
Compost
0.50
>More info
0.12
>More info
Perlite
Compost
Original data
GEO bulk
54
Col0-PsmES4326-24hpi
0.01
>More info
0.61
>More info
Col0-mock-24hpi
leaf
Original data
GEO bulk
55
AtGATA2ox
0.60
>More info
0.01
>More info
Col
seedling
Original data
GEO bulk
56
Osmotic Stress 24 h (root)
0.54
>More info
0.06
>More info
Stress mock 24 h (root)
Original data
Stress treatments
57
nia1nia2
-0.57
>More info
-0.03
>More info
Col-0
whole seedlings
Original data
GEO bulk
58
embryo proper pre-globular
0.55
>More info
0.04
>More info
whole seed sections pre-globular
Original data
GEO bulk
59
10mM sucrose
-0.54
>More info
-0.04
>More info
control
Whole seedling
Original data
GEO bulk
60
root hypoxia pSUC2
0.61
>More info
-0.03
>More info
root hypoxia total
hypoxia
root
Original data
GEO bulk
61
chalazal endosperm pre-globular
0.54
>More info
0.03
>More info
whole seed sections pre-globular
Original data
GEO bulk
62
seed germinating in countinuous light 24h SL
-0.10
>More info
0.67
>More info
Control for tissue data
seed
Original data
GEO bulk
63
Leafminer damaged seedlings
0.01
>More info
0.56
>More info
Healthy seedlings
leaves
Original data
GEO bulk
64
CCA1-ox 6am non-polysomal
0.06
>More info
0.51
>More info
WT 6am non-polysomal
aerial part
Original data
65
root control pSCR
0.52
>More info
0.04
>More info
root control total
control
root
Original data
GEO bulk
66
35S:CDO1 normoxia
0.57
>More info
-0.01
>More info
WT normoxia
normoxia
whole rosette
Original data
67
peripheral endosperm pre-globular
0.56
>More info
-0.01
>More info
whole seed sections pre-globular
Original data
GEO bulk
68
protoplasts T1 [flg22]
-0.50
>More info
-0.05
>More info
protoplasts T1 [CPK]
mesophyll protoplasts
Original data
GEO bulk
69
anac017-1 water 3h
-0.51
>More info
-0.02
>More info
WT water 3h
3h_water
Original data
GEO bulk
70
IPT8 induced 12h
0.55
>More info
-0.04
>More info
Control 12h
12 hours
primary root tip (5 mm)
Original data
GEO bulk
71
Col BTH
-0.18
>More info
0.67
>More info
Col
rosettes
Original data
GEO bulk
72
IAA 8h
0.50
>More info
-0.01
>More info
control 8h
root
Original data
GEO bulk
73
chalazal seed coat pre-globular
0.59
>More info
-0.10
>More info
whole seed sections pre-globular
Original data
GEO bulk
74
6h volatiles Sp. HRO-C48
-0.57
>More info
0.08
>More info
6h untreated
whole seedling
Original data
GEO bulk
75
MG132 3 h
0.54
>More info
-0.06
>More info
Mock 3 h
Original data
Effect of other inhibitors on seedlings
76
micropylar endosperm pre-globular
0.56
>More info
-0.09
>More info
whole seed sections pre-globular
Original data
GEO bulk
77
elevated CO2 high Mg shoot
-0.51
>More info
0.04
>More info
atmospheric CO2 high Mg shoot
Shoot
Original data
78
cngc19
-0.57
>More info
0.10
>More info
Col-0
root
Original data
GEO bulk
79
seedling 30 min S Exp
-0.50
>More info
0.06
>More info
seedling -S Exp
seedling
Original data
80
Dex-rga(delta17) 4h GA4
0.53
>More info
-0.13
>More info
Vector 4h GA4
shoots
Original data
GEO bulk
81
ein2-1 +elf18 2h
0.53
>More info
-0.19
>More info
WT +elf18 2h
elf18
Original data
GEO bulk
82
F1 whole seedlings root
-0.55
>More info
0.24
>More info
Col whole seedlings root
Seedlings
Original data
GEO bulk
83
TNT-seedlings
-0.28
>More info
0.58
>More info
DMF-control-seedlings
TNT-treated-seedlings
whole plant
Original data
GEO bulk
84
BAM8-Cat Ox untreated
-0.50
>More info
0.27
>More info
WT untreated
none
shoot
Original data