root longitudinal zone-4 low sulfur

4.0:Analysis result - correlation network

Home Method Manual History

Module-based correlation network(MCN) centered on root longitudinal zone-4 low sulfur

> How to read results

Simple
All

>>Show Interactive view (test)

List of experiments correlated with "root longitudinal zone-4 low sulfur"

Download transcriptome of top 30

Score	Experiment	Correlation from root longitudinal zone-4 low sulfur	Correlation to root longitudinal zone-4 low sulfur	Control Experiment	Treatment	Tissue	Link to original data	Experimental Category
1	root longitudinal zone-4 low sulfur	1.00 >More info	1.00 >More info	root longitudinal zone-4 pH 5.7			Original data	GEO bulk
2	root longitudinal zone-3 low sulfur	0.74 >More info	0.82 >More info	root longitudinal zone-3 pH 5.7			Original data	GEO bulk
3	root cells epidermis and lateral root cap -Fe	0.75 >More info	0.70 >More info	whole roots standard			Original data	GEO bulk
4	root cells -Fe	0.71 >More info	0.65 >More info	whole roots standard		Standard media transferred to -Fe media for 24 hours prior to harvesting tissue	Original data	GEO bulk
5	8hr-pH4.5	-0.73 >More info	-0.60 >More info	8hr-pH6	8hr pH 4.5	roots	Original data	GEO bulk
6	protoplasted roots pH4.6	0.68 >More info	0.65 >More info	Whole root - Std pH 1H	pH 4.6 for 24H		Original data	GEO bulk
7	root longitudinal zone-3 pH 4.6	-0.55 >More info	-0.77 >More info	root longitudinal zone-3 pH 5.7			Original data	GEO bulk
8	Whole root - low pH 6H	-0.61 >More info	-0.68 >More info	Whole root - Std pH 6H	pH 4.6 for 6 hr		Original data	GEO bulk
9	Fenclorim 24hr	-0.73 >More info	-0.56 >More info	Acetone 24hr		root	Original data	GEO bulk
10	root cells columella root cap -Fe	0.58 >More info	0.65 >More info	whole roots standard			Original data	GEO bulk
11	Whole root - low pH 12H	-0.60 >More info	-0.61 >More info	Whole root - Std pH 12H	pH 4.6 for 12 hr		Original data	GEO bulk
12	root endodermis -S	0.63 >More info	0.53 >More info	root endodermis and quiescent center pH5.7			Original data	GEO bulk
13	root longitudinal zone-3 NaCl	-0.53 >More info	-0.60 >More info	root longitudinal zone-3			Original data	GEO bulk
14	root stele -S	0.40 >More info	0.73 >More info	root stele pH5.7			Original data	GEO bulk
15	root longitudinal zone-1 pH 4.6	-0.55 >More info	-0.57 >More info	root longitudinal zone-1 pH 5.7			Original data	GEO bulk
16	6h +Pi	0.48 >More info	0.63 >More info	6h -Pi		root	Original data	GEO bulk
17	Fenclorim 4hr	-0.63 >More info	-0.47 >More info	Acetone 4hr		root	Original data	GEO bulk
18	24h +Pi	0.69 >More info	0.40 >More info	24h -Pi		root	Original data	GEO bulk
19	8-DAC chr11-1chr17-1	-0.59 >More info	-0.49 >More info	8-DAC Col-0		leaf explants	Original data
20	lib	0.64 >More info	0.44 >More info	WT		whole seedling	Original data	GEO bulk
21	dorn1-1 Root 100 mM ATP 30 min	0.53 >More info	0.54 >More info	Col-0 Root 100 mM ATP 30 min		Roots of 5 day-old seedlings	Original data
22	Whole root - low pH 3H	-0.46 >More info	-0.57 >More info	Whole root - Std pH 3H	pH 4.6 for 3 hr		Original data	GEO bulk
23	ABA	-0.52 >More info	-0.50 >More info	control			Original data	GEO bulk
24	dorn1-1 Root MES buffer 30 min	0.52 >More info	0.48 >More info	Col-0 Root MES buffer 30 min		Roots of 5 day-old seedlings	Original data
25	roottip control pWOL	-0.51 >More info	-0.47 >More info	roottip control total	control	roottip	Original data	GEO bulk
26	Red/FR Light 4 h	0.39 >More info	0.59 >More info	FarRed Light 4 h			Original data	Light treatments
27	bZIP1ko mutant N+Light-	-0.47 >More info	-0.51 >More info	WT-sib N+Light-		whole plant	Original data	GEO bulk
28	seed germinating in countinuous light 24h SL	0.30 >More info	0.67 >More info	Control for tissue data		seed	Original data	GEO bulk
29	root cells stele -Fe	0.43 >More info	0.53 >More info	whole roots standard			Original data	GEO bulk
30	WT (Ler) TSA	-0.54 >More info	-0.41 >More info	WT (Ler) CK0	cultured for 3 days on CIM containing 100 ng/ml 2 4-D and 100 ng/ml TSA.	tissue culture	Original data	GEO bulk
31	root - 04% oxygen - 48h	0.59 >More info	0.36 >More info	root - 21% oxygen - 48h			Original data	GEO bulk
32	SHR-GR Time 1H Dex	-0.45 >More info	-0.50 >More info	SHR-GR Time 0H Dex	Dex media for 1 hour		Original data	GEO bulk
33	24h volatiles Sm. R3089	0.43 >More info	0.52 >More info	24h untreated		whole seedling	Original data	GEO bulk
34	Mutant nph4-1_arf19-1	-0.64 >More info	-0.30 >More info	Col			Original data	GEO bulk
35	2hr transitory KNO3 PrR cell	0.58 >More info	0.36 >More info	2hr KCl control PrR cell		Protoplasted root cells	Original data	GEO bulk
36	root longitudinal zone-2 pH 4.6	-0.33 >More info	-0.61 >More info	root longitudinal zone-2 pH 5.7			Original data	GEO bulk
37	CMP 24hr	-0.63 >More info	-0.30 >More info	Acetone 24hr		root	Original data	GEO bulk
38	afb3-1 2h KNO3	-0.41 >More info	-0.52 >More info	Ws 2h KNO3	2 hours of 5 mM KNO3	Arabidopsis root	Original data	GEO bulk
39	Shoot -Cs	-0.24 >More info	-0.69 >More info	Control-shoot			Original data	GEO bulk
40	root cortex 40 mM NaCl	-0.34 >More info	-0.59 >More info	root cortex			Original data	GEO bulk
41	upb1-1 elongation zone	-0.40 >More info	-0.52 >More info	Col-0 elongation zone		Seedling root elongation zone	Original data	GEO bulk
42	ABA DFPM	-0.62 >More info	-0.30 >More info	control			Original data	GEO bulk
43	bri1-5 mutant	0.56 >More info	0.35 >More info	WT		7 day-old whole seedlings	Original data
44	root longitudinal zone-2 low sulfur	0.36 >More info	0.55 >More info	root longitudinal zone-2 pH 5.7			Original data	GEO bulk
45	root cap pGL2(QC pSCRBRI1) 0h BL	-0.50 >More info	-0.40 >More info	WR 35S 0h BL	brassinosteroid	root	Original data
46	hni9 high nitrogen	0.53 >More info	0.37 >More info	WT high nitrogen		roots	Original data	GEO bulk
47	WR 35S 8h BL	-0.67 >More info	-0.23 >More info	WR 35S 0h BL	brassinosteroid	root	Original data
48	bri1-116	0.17 >More info	0.73 >More info	Col		seedling	Original data	GEO bulk
49	FarRed Light 4 h	-0.32 >More info	-0.58 >More info	White Light 4 h			Original data	Light treatments
50	Cocultivation 8 hrs root	-0.55 >More info	-0.33 >More info	Mock cocultivation 8 hrs root		Root	Original data
51	oas-a1.1 Cd 18h	-0.63 >More info	-0.25 >More info	Cd 18h root		Root	Original data	GEO bulk
52	root longitudinal zone-1 low sulfur	0.31 >More info	0.56 >More info	root longitudinal zone-1 pH 5.7			Original data	GEO bulk
53	slr-1 6h NAA	-0.33 >More info	-0.54 >More info	Col-0 6h NAA			Original data	GEO bulk
54	ga1-3 SCL3OE	-0.52 >More info	-0.35 >More info	ga1-3		whole root	Original data
55	21h-DC3000 avrRpm1	0.17 >More info	0.70 >More info	21h-DC3000		leaves	Original data	GEO bulk
56	FarRed Light 45min	0.23 >More info	0.63 >More info	White Light 45min			Original data	Light treatments
57	P35S:rGRF1	0.54 >More info	0.31 >More info	Col-0			Original data	GEO bulk
58	Sha-30min IAA	-0.59 >More info	-0.26 >More info	Sha-0h IAA		whole plant	Original data	GEO bulk
59	ubc13A -Fe	0.53 >More info	0.31 >More info	Col -Fe		root	Original data	GEO bulk
60	Root from tip to 130 mm proximal to tip (cut 8dpg)	0.50 >More info	0.33 >More info	Control for tissue data			Original data	GEO bulk
61	plant (Col-0) 4h phytoprostane A1	-0.52 >More info	-0.31 >More info	plant (tga2-5-6) 4h control			Original data	GEO bulk
62	lateral root cap-columella pBRN2 0h BL	0.59 >More info	0.24 >More info	WR 35S 0h BL	brassinosteroid	root	Original data
63	SCR-GR Time 12H Dex	-0.22 >More info	-0.61 >More info	SCR-GR Time 0H Dex	Dex media for 12 hours		Original data	GEO bulk
64	Regenerating Stump Root Tip Cut 130 mm andn Recut 0 hrs Taking 70 mm of Stump (8 dpg)	0.51 >More info	0.31 >More info	Control for tissue data			Original data	GEO bulk
65	fus3-3 12 DAF Seed	0.52 >More info	0.29 >More info	WT (Col-0) 12 DAF Seed-3		developing seeds dissected from sliques	Original data
66	24h volatiles Sp. HRO-C48	0.27 >More info	0.54 >More info	24h untreated		whole seedling	Original data	GEO bulk
67	ABA	-0.59 >More info	-0.22 >More info	control			Original data	GEO bulk
68	Heat shock optimum	0.15 >More info	0.65 >More info	Heat shock baseline	Photosynthesis at optimum temperature	leaf first fully expanded	Original data	GEO bulk
69	2hr continuous KNO3 PrR cell	0.58 >More info	0.22 >More info	2hr KCl control PrR cell		Protoplasted root cells	Original data	GEO bulk
70	21h-DC3000 hrpA	0.15 >More info	0.63 >More info	21h-DC3000		leaves	Original data	GEO bulk
71	coi1-2	-0.52 >More info	-0.25 >More info	Col-0 mock		Whole seedling	Original data	GEO bulk
72	root cells cortex -Fe	0.51 >More info	0.26 >More info	whole roots standard			Original data	GEO bulk
73	Col-0 norflurazon	0.61 >More info	0.16 >More info	Col-0 control			Original data	GEO bulk
74	Shoot apex inflorescence (after bolting)	0.12 >More info	0.65 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
75	expressing C2 Mock	0.27 >More info	0.50 >More info	LUC2C			Original data	GEO bulk
76	GO5; 8h switch to ambient CO2 concentrations;	-0.25 >More info	-0.51 >More info	WT; 8h switch to ambient CO2 concentrations;		2 whole rosettes	Original data
77	T101A 10mM NH4NO3	-0.57 >More info	-0.17 >More info	col 10mM NH4NO3		Root	Original data
78	SA 4mM	-0.20 >More info	-0.54 >More info	untreated	4 weeks old at time of treatment	whole leaf	Original data	GEO bulk
79	GA 120min	-0.22 >More info	-0.52 >More info	CON120	GA 120 min.	root tips	Original data	GEO bulk
80	low CO2 + light	-0.15 >More info	-0.59 >More info	normal CO2 + light			Original data	GEO bulk
81	root stele 40 mM NaCls	-0.23 >More info	-0.50 >More info	root stele			Original data	GEO bulk
82	chl1-5 10mM NH4NO3	-0.56 >More info	-0.16 >More info	col 10mM NH4NO3		Root	Original data
83	vtc2 zygotic embryo	0.50 >More info	0.22 >More info	WT zygotic embryo		zygotic embryo	Original data	GEO bulk
84	root callus inducing medium 24h	-0.51 >More info	-0.21 >More info	root callus inducing medium 0 h	24 hours after incubating on callus inducing medium	root explants	Original data	GEO bulk
85	Red Light 4 h	0.21 >More info	0.51 >More info	White Light 4 h			Original data	Light treatments
86	dor control	-0.22 >More info	-0.50 >More info	WT control			Original data	GEO bulk
87	ABA SA 24h	-0.18 >More info	-0.54 >More info	EtOH 24h	24hr		Original data	GEO bulk
88	TaFLS overexpression line (OE1)	0.18 >More info	0.54 >More info	Col-0		Rosette leaves	Original data
89	Col ozone 3h	-0.15 >More info	-0.56 >More info	Col clean-air 3h	ozone		Original data	GEO bulk
90	SCR-GR Time 6H Dex	0.00 >More info	-0.71 >More info	SCR-GR Time 0H Dex	Dex media for 6 hours		Original data	GEO bulk
91	root epidermis and lateral root cap -S	0.08 >More info	0.62 >More info	root epidermis and lateral root cap pH5.7			Original data	GEO bulk
92	ara1/2mut	0.12 >More info	0.58 >More info	Col-3			Original data	GEO bulk
93	Inflorescences Trp1	0.17 >More info	0.52 >More info	Inflorescences ler		inflorescences	Original data	GEO bulk
94	gul2-1 bri1-5 mutant	0.51 >More info	0.18 >More info	WT		7 day-old whole seedlings	Original data
95	stn7-1	0.15 >More info	0.53 >More info	Col-0		rosette leaves	Original data	GEO bulk
96	ABA JA 24h	-0.17 >More info	-0.51 >More info	EtOH 24h	24hr		Original data	GEO bulk
97	Tsu -Fe 24h Roots	-0.53 >More info	-0.14 >More info	Tsu +Fe 24h Roots			Original data	GEO bulk
98	Tsu-1 -Fe 24h	-0.53 >More info	-0.14 >More info	Tsu-1 +Fe 24h		roots	Original data	GEO bulk
99	arf2 brz	0.50 >More info	0.17 >More info	arf2 mock			Original data	GEO bulk
100	Osmotic Stress 24 h (root)	-0.53 >More info	-0.14 >More info	Stress mock 24 h (root)			Original data	Stress treatments
101	red illumination +lincomycin	0.11 >More info	0.56 >More info	red illumination -lincomycin			Original data	GEO bulk
102	ms35 silique stage 7	0.09 >More info	0.58 >More info	Ler 6.7		anther and filament	Original data	GEO bulk
103	IPT8 mutant tZ 12h	-0.55 >More info	-0.11 >More info	Control 12h	12 hours	primary root tip (5 mm)	Original data	GEO bulk
104	GST-overexpression seedlings control	-0.16 >More info	-0.50 >More info	WT seedlings control		Seedlings	Original data
105	DC3000 2 h (leaf)	-0.14 >More info	-0.51 >More info	Mock 2 h (leaf)			Original data	Pseudomonas syringae pv. tomato or pv. phaseolicola infection
106	gun1-9 norflurazon	0.53 >More info	0.09 >More info	gun1-9 control			Original data	GEO bulk
107	root Dosed gold	-0.54 >More info	-0.08 >More info	root No gold	.125 mM gold 24 h	roots	Original data
108	root - 08% oxygen - 48h	0.60 >More info	0.02 >More info	root - 21% oxygen - 48h			Original data	GEO bulk
109	0.125 mM gold 24 h	-0.54 >More info	-0.08 >More info	root	0.125 mM gold 24 h	roots	Original data	GEO bulk
110	T101D 10mM NH4NO3	-0.57 >More info	-0.05 >More info	col 10mM NH4NO3		Root	Original data
111	elevated CO2 normal Mg root	0.54 >More info	0.07 >More info	atmospheric CO2 normal Mg root		Root	Original data
112	FLIGHT TAGESB plate6 ROOTS	0.51 >More info	0.10 >More info	GROUND CONTROL TAGESB plate6 ROOTS		plant tissue	Original data
113	35S:VND7-VP16-GR+CHX	0.02 >More info	-0.63 >More info	harboring empty vector+CHX	10mM cycloheximide (CHX) 6hrs	whole seedlings	Original data	GEO bulk
114	root BA 12h	-0.54 >More info	-0.06 >More info	root control 12h	boron (5mM)	root	Original data	GEO bulk
115	Kas -Fe 24h Roots	0.50 >More info	0.10 >More info	Kas +Fe 24h Roots			Original data	GEO bulk
116	Kas-1 -Fe 24h	0.50 >More info	0.10 >More info	Kas-1 +Fe 24h		roots	Original data	GEO bulk
117	seedling -S Exp	-0.75 >More info	0.17 >More info	seedling FN Exp		seedling	Original data
118	Laer pretreat GA Flg22 1h	-0.13 >More info	0.71 >More info	Laer pretreat water control		leaf discs	Original data	GEO bulk
119	ani1 T16	0.50 >More info	0.07 >More info	WT T16		root tissue	Original data	GEO bulk
120	IAA7mII over-expressor IAA Treated	-0.12 >More info	0.69 >More info	empty vector IAA Treated			Original data	GEO bulk
121	GST 4 h (leaf)	-0.04 >More info	-0.52 >More info	Mock 4 h (leaf)			Original data	Elicitor treatments
122	SCR-GR Time 1H Dex	0.01 >More info	-0.57 >More info	SCR-GR Time 0H Dex	Dex media for 1 hour		Original data	GEO bulk
123	oas-a1.1 root	-0.04 >More info	-0.50 >More info	WT-Untreated		Root	Original data	GEO bulk
124	WT drought	-0.02 >More info	-0.51 >More info	WT control		All aerial tissue	Original data	GEO bulk
125	Col BTH	-0.15 >More info	0.67 >More info	Col		rosettes	Original data	GEO bulk
126	SA Treated	-0.59 >More info	0.08 >More info	Water			Original data	GEO bulk
127	swn-7	-0.01 >More info	0.52 >More info	Col		whole plant	Original data	GEO bulk
128	phosphate-starved	-0.01 >More info	-0.50 >More info	control		shoot tissue	Original data	GEO bulk
129	CCA1-ox 6am non-polysomal	-0.00 >More info	0.51 >More info	WT 6am non-polysomal		aerial part	Original data
130	35S::PI ap3-3 35S::AP-GR +DEX	0.10 >More info	-0.60 >More info	0hr DEX			Original data	GEO bulk
131	ein2 1% sucrose 14-day-old	-0.50 >More info	0.02 >More info	Col-0 1% sucrose 14-day-old			Original data	GEO bulk
132	Leafminer damaged seedlings	-0.11 >More info	0.56 >More info	Healthy seedlings		leaves	Original data	GEO bulk
133	tfl1-1-16ºC	0.08 >More info	-0.51 >More info	WT-16ºC			Original data	GEO bulk
134	Blue Light 45 min	-0.13 >More info	0.51 >More info	White Light 45min			Original data	Light treatments
135	siliques AtHb1 control	-0.16 >More info	0.52 >More info	siliques WT control	control	silique	Original data	GEO bulk
136	Col0-PsmES4326-24hpi	-0.27 >More info	0.61 >More info	Col0-mock-24hpi		leaf	Original data	GEO bulk
137	SHR-GR Time 6H Dex	-0.29 >More info	0.52 >More info	SHR-GR Time 0H Dex	Dex media for 6 hours		Original data	GEO bulk