4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on root cells stele 140mM NaCl 3 hours
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Score Experiment Correlation from
root cells stele 140mM NaCl 3 hours		 Correlation to
root cells stele 140mM NaCl 3 hours		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 root cells stele 140mM NaCl 3 hours 1.00 >More info 1.00 >More info root cells stele standard 1 hour root cells stele Original data
2 root cells stele 140mM NaCl 8 hours 0.90 >More info 0.91 >More info root cells stele standard 1 hour root cells stele Original data
3 root cells stele 140mM NaCl 1 hour 0.89 >More info 0.90 >More info root cells stele standard 1 hour root cells stele Original data
4 root cells stele 140mM NaCl 32 hours 0.83 >More info 0.89 >More info root cells stele standard 1 hour root cells stele Original data
5 root cells stele 140mM NaCl 20 hours 0.83 >More info 0.88 >More info root cells stele standard 1 hour root cells stele Original data
6 root cells endodermis 140mM NaCl 3 hours 0.86 >More info 0.84 >More info root cells endodermis standard 1 hour root cells endodermis Original data
7 root cells stele 140mM NaCl 48 hours 0.83 >More info 0.87 >More info root cells stele standard 1 hour root cells stele Original data
8 root cells epidermis 140mM NaCl 3 hours 0.80 >More info 0.85 >More info root cells epidermis standard 1 hour root cells epidermis Original data
9 root cells cortex 140mM NaCl 8 hours 0.84 >More info 0.80 >More info root cells cortex standard 1 hour root cells cortex Original data
10 root cells cortex 140mM NaCl 1 hour 0.81 >More info 0.80 >More info root cells cortex standard 1 hour root cells cortex Original data
11 root cells epidermis 140mM NaCl 8 hours 0.79 >More info 0.82 >More info root cells epidermis standard 1 hour root cells epidermis Original data
12 root cells endodermis 140mM NaCl 1 hour 0.82 >More info 0.79 >More info root cells endodermis standard 1 hour root cells endodermis Original data
13 root cells cortex 140mM NaCl 3 hours 0.83 >More info 0.78 >More info root cells cortex standard 1 hour root cells cortex Original data
14 root cells epidermis 140mM NaCl 1 hour 0.75 >More info 0.84 >More info root cells epidermis standard 1 hour root cells epidermis Original data
15 root cells epidermis 140mM NaCl 20 hours 0.77 >More info 0.80 >More info root cells epidermis standard 1 hour root cells epidermis Original data
16 root cells endodermis 140mM NaCl 8 hours 0.82 >More info 0.74 >More info root cells endodermis standard 1 hour root cells endodermis Original data
17 root cells epidermis 140mM NaCl 48 hours 0.76 >More info 0.79 >More info root cells epidermis standard 1 hour root cells epidermis Original data
18 root cells endodermis 140mM NaCl 48 hours 0.79 >More info 0.75 >More info root cells endodermis standard 1 hour root cells endodermis Original data
19 root longitudinal zone-4 NaCl 0.74 >More info 0.79 >More info root longitudinal zone-4 Original data GEO bulk
20 root cells epidermis 140mM NaCl 32 hours 0.73 >More info 0.79 >More info root cells epidermis standard 1 hour root cells epidermis Original data
21 root cells endodermis 140mM NaCl 20 hours 0.78 >More info 0.73 >More info root cells endodermis standard 1 hour root cells endodermis Original data
22 root cells endodermis 140mM NaCl 32 hours 0.76 >More info 0.74 >More info root cells endodermis standard 1 hour root cells endodermis Original data
23 root cells cortex 140mM NaCl 20 hours 0.74 >More info 0.73 >More info root cells cortex standard 1 hour root cells cortex Original data
24 whole roots 140 mM NaCl 4 hour 0.67 >More info 0.76 >More info whole roots standard Original data GEO bulk
25 root cells cortex 140mM NaCl 48 hours 0.75 >More info 0.68 >More info root cells cortex standard 1 hour root cells cortex Original data
26 root cells cortex 140mM NaCl 32 hours 0.73 >More info 0.68 >More info root cells cortex standard 1 hour root cells cortex Original data
27 root endodermis and quiescent center 40 mM NaCl 0.59 >More info 0.82 >More info root endodermis and quiescent center Original data GEO bulk
28 NaCl Col 0.67 >More info 0.72 >More info Col Original data GEO bulk
29 24h +Pi -0.69 >More info -0.67 >More info 24h -Pi root Original data GEO bulk
30 root Dosed gold 0.75 >More info 0.56 >More info root No gold .125 mM gold 24 h roots Original data
31 root stele pH4.6 0.67 >More info 0.64 >More info root stele pH5.7 Original data GEO bulk
32 0.125 mM gold 24 h 0.75 >More info 0.56 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
33 root stele 40 mM NaCls 0.68 >More info 0.62 >More info root stele Original data GEO bulk
34 whole roots 140 mM NaCl 1 hour 0.63 >More info 0.66 >More info whole roots standard Original data GEO bulk
35 AgNO3 3 h 0.54 >More info 0.74 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
36 bbx24 in Simulated Shade -0.54 >More info -0.71 >More info WT in simulated shade shade seedling Original data
37 whole roots 140 mM NaCl 30 minutes 0.59 >More info 0.66 >More info whole roots standard Original data GEO bulk
38 root longitudinal zone-3 NaCl 0.53 >More info 0.72 >More info root longitudinal zone-3 Original data GEO bulk
39 root epidermis and lateral root cap pH4.6 0.54 >More info 0.67 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
40 6h +Pi -0.55 >More info -0.66 >More info 6h -Pi root Original data GEO bulk
41 line J1551-5 days control + 2 days salt s 0.54 >More info 0.66 >More info line J1551-7 days-control Original data
42 root columella root cap 40 mM NaCl 0.55 >More info 0.64 >More info root columella root cap Original data GEO bulk
43 rhd2 0.55 >More info 0.62 >More info WT Small excised segments of primary root tissue corresponding to root-hair elongation zone Original data GEO bulk
44 epidermis auxin 0.58 >More info 0.57 >More info epidermis control 5 uM indole-3-acetic acid epidermis Original data GEO bulk
45 ABA DFPM 0.65 >More info 0.50 >More info control Original data GEO bulk
46 8hr-pH4.5 0.55 >More info 0.59 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
47 Phytoprostane A1 4 h 0.52 >More info 0.62 >More info Col-0 Original data GEO bulk
48 Chemically 0.36 >More info 0.78 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
49 root epidermis and lateral root cap -S 0.59 >More info 0.54 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
50 Chitosan 3h Treatment 0.57 >More info 0.56 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
51 TNT-seedlings 0.50 >More info 0.62 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
52 Osmotic Stress 24 h (root) 0.62 >More info 0.50 >More info Stress mock 24 h (root) Original data Stress treatments
53 root longitudinal zone-3 pH 4.6 0.44 >More info 0.68 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
54 5-Triiodobenzoic acid3 h 0.55 >More info 0.56 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
55 inhibitor B Treated 0.60 >More info 0.50 >More info Negative Control Original data GEO bulk
56 Fenclorim 4hr 0.56 >More info 0.53 >More info Acetone 4hr root Original data GEO bulk
57 whole roots -Fe 72 hour 0.50 >More info 0.58 >More info whole roots standard Original data GEO bulk
58 Fe starvation 72 h 0.50 >More info 0.58 >More info Control Original data GEO bulk
59 root cortex 40 mM NaCl 0.51 >More info 0.57 >More info root cortex Original data GEO bulk
60 roots IAA 0.41 >More info 0.67 >More info roots mock Original data GEO bulk
61 Whole root - low pH 12H 0.48 >More info 0.59 >More info Whole root - Std pH 12H pH 4.6 for 12 hr Original data GEO bulk
62 plant (Col-0) 4h phytoprostane A1 0.53 >More info 0.53 >More info plant (tga2-5-6) 4h control Original data GEO bulk
63 root epidermis and lateral root cap 40 mM NaCl 0.54 >More info 0.52 >More info root epidermis and lateral root cap Original data GEO bulk
64 ABA 3 h 0.46 >More info 0.60 >More info Mock 3 h Original data Basic hormone treatment of seedlings
65 rosettes WT drought 0.49 >More info 0.57 >More info rosettes WT watered Original data GEO bulk
66 root hypoxia pWOL 0.53 >More info 0.52 >More info root hypoxia total hypoxia root Original data GEO bulk
67 root hypoxia pSHR 0.55 >More info 0.50 >More info root hypoxia total hypoxia root Original data GEO bulk
68 oas-a1.1 Cd 18h 0.49 >More info 0.56 >More info Cd 18h root Root Original data GEO bulk
69 OXUPB1-2 meristematic zone 0.58 >More info 0.47 >More info Col-0 meristematic zone Seedling root meristem zone Original data GEO bulk
70 Cocultivation 8 hrs root 0.57 >More info 0.48 >More info Mock cocultivation 8 hrs root Root Original data
71 Col-0 low oxygen 0.51 >More info 0.53 >More info Col-0 control low oxygen root Original data GEO bulk
72 root control pRPL11C 0.60 >More info 0.42 >More info root control total control root Original data GEO bulk
73 whole roots -Fe 48 hour 0.51 >More info 0.51 >More info whole roots standard Original data GEO bulk
74 dicamba 0.52 >More info 0.49 >More info WT mock whole seedling Original data GEO bulk
75 Fenclorim 24hr 0.53 >More info 0.47 >More info Acetone 24hr root Original data GEO bulk
76 6-trichlorophenoxyacetic acid 3 h 0.51 >More info 0.49 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
77 rosettes drought 0.44 >More info 0.56 >More info rosettes watered Original data GEO bulk
78 stele pSHR 0h BL 0.59 >More info 0.40 >More info WR 35S 0h BL brassinosteroid root Original data
79 root control p35S 0.60 >More info 0.39 >More info root control total control root Original data GEO bulk
80 rosettes myoox drought 0.39 >More info 0.60 >More info rosettes myoox watered Original data GEO bulk
81 upb1-1 elongation zone -0.45 >More info -0.54 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
82 root BA 12h 0.47 >More info 0.52 >More info root control 12h boron (5mM) root Original data GEO bulk
83 whole roots 140 mM NaCl 16 hour 0.41 >More info 0.58 >More info whole roots standard Original data GEO bulk
84 line J2731-5 days control + 2 days salt s 0.46 >More info 0.53 >More info line J2731-7 days-control Original data
85 Mutant axr3-1 0.39 >More info 0.59 >More info Col Original data GEO bulk
86 Mutant axr3-1 (IAA) 0.35 >More info 0.62 >More info Col (IAA) Original data GEO bulk
87 Root -K 0.47 >More info 0.50 >More info Control-root Original data GEO bulk
88 hira-root -0.55 >More info -0.41 >More info WT-root root Original data
89 SCR 48hr-S 0.39 >More info 0.57 >More info SCR 0hr endodermis Original data
90 SCR 24hr-S 0.37 >More info 0.59 >More info SCR 0hr endodermis Original data
91 Whole root - low pH 24H 0.39 >More info 0.56 >More info Whole root - Std pH 24H pH 4.6 for 24 hr Original data GEO bulk
92 columella auxin 0.44 >More info 0.51 >More info columella control 5 uM indole-3-acetic acid columella Original data GEO bulk
93 plant (tga2-5-6) 4h phytoprostane A1 0.44 >More info 0.50 >More info plant (tga2-5-6) 4h control Original data GEO bulk
94 Col0-PsmES4326-24hpi 0.33 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
95 C2 leaf-drought 0.36 >More info 0.56 >More info C2 leaf-well watered Original data GEO bulk
96 R. solani AG8 0.41 >More info 0.51 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
97 whole roots -Fe 6 hour 0.36 >More info 0.55 >More info whole roots standard Original data GEO bulk
98 Leafminer damaged seedlings 0.35 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
99 P.p 30hai 0.58 >More info 0.33 >More info At-Control roots Original data GEO bulk
100 MG132 3 h 0.34 >More info 0.57 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
101 CMP 4hr 0.50 >More info 0.40 >More info Acetone 4hr root Original data GEO bulk
102 CMP 24hr 0.54 >More info 0.36 >More info Acetone 24hr root Original data GEO bulk
103 siliques AtHb1 control 0.38 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
104 M6PR transgenic leaf 100mM NaCl -0.38 >More info -0.51 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
105 shoots bhlh100/101 100uM Fe -0.03 >More info -0.86 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
106 root longitudinal zone-2 NaCl 0.35 >More info 0.54 >More info root longitudinal zone-2 Original data GEO bulk
107 toc1-1-81hr 0.29 >More info 0.60 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
108 Shoot -Cs 0.31 >More info 0.58 >More info Control-shoot Original data GEO bulk
109 B.cinerea 18 h infection 0.32 >More info 0.56 >More info Mock 18 h Original data Botrytis cinerea infection
110 Botrytis cinerea 18h 0.32 >More info 0.56 >More info control 18h Original data GEO bulk
111 Salt Stress 24 h (root) 0.54 >More info 0.33 >More info Stress mock 24 h (root) Original data Stress treatments
112 aux1 mutant roots ethylene 0.31 >More info 0.56 >More info roots air Original data GEO bulk
113 ABA 24h 0.34 >More info 0.52 >More info EtOH 24h 24hr Original data GEO bulk
114 roottip hypoxia total 0.26 >More info 0.60 >More info roottip control total Original data GEO bulk
115 bri1-116 0.13 >More info 0.73 >More info Col seedling Original data GEO bulk
116 Col-0 drought 0.36 >More info 0.50 >More info Col-0 control Original data GEO bulk
117 SCR 96hr-S 0.32 >More info 0.53 >More info SCR 0hr endodermis Original data
118 SCR 72hr-S 0.31 >More info 0.54 >More info SCR 0hr endodermis Original data
119 CeO2 germinant -0.22 >More info -0.63 >More info Millipore Water germinant CeO2 seedling Original data
120 Whole root - S 48H 0.22 >More info 0.62 >More info Whole root - S 0H Original data GEO bulk
121 Botrytis cinerea 48h 0.29 >More info 0.54 >More info control 48h Original data GEO bulk
122 root longitudinal zone-1 NaCl 0.28 >More info 0.55 >More info root longitudinal zone-1 Original data GEO bulk
123 Col BTH 0.16 >More info 0.67 >More info Col rosettes Original data GEO bulk
124 root hypoxia pRPL11C 0.54 >More info 0.28 >More info root hypoxia total hypoxia root Original data GEO bulk
125 toc1-1-85hr 0.24 >More info 0.56 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
126 Heat shock optimum 0.15 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
127 SCR-GR Time 3H Dex 0.24 >More info 0.55 >More info SCR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
128 IAA 2h 0.28 >More info 0.51 >More info control 2h root Original data GEO bulk
129 Laer pretreat GA Flg22 1h 0.06 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
130 Nicotinamide-53hr 0.21 >More info 0.56 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
131 Laer pretreat JA Flg22 0h 0.18 >More info 0.58 >More info Laer pretreat water control leaf discs Original data GEO bulk
132 toc1-1-53hr 0.15 >More info 0.61 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
133 Homozygous-AtcesA6 0.23 >More info 0.53 >More info Heterozygous-AtcesA6 rosette Original data GEO bulk
134 35S:VND7-VP16-GR+DEX +CHX 0.18 >More info 0.56 >More info 35S:VND7-VP16-GR+CHX 10mM cycloheximide (CHX) 2hrs followed by 10mM dexamethazone (DEX) 4hrs whole seedlings Original data GEO bulk
135 Whole root - S 24H 0.19 >More info 0.55 >More info Whole root - S 0H Original data GEO bulk
136 eds16 whole leaf 1dpi 0.19 >More info 0.54 >More info Col whole leaf 1dpi whole leaf Original data GEO bulk
137 long 17-degree- 0.17 >More info 0.54 >More info control long Original data GEO bulk
138 long 14-degree- 0.20 >More info 0.51 >More info control long Original data GEO bulk
139 root - 01% oxygen - 48h 0.21 >More info 0.50 >More info root - 21% oxygen - 48h Original data GEO bulk
140 short 8-degree- 0.14 >More info 0.56 >More info control short Original data GEO bulk
141 BAM8-Lig Ox untreated 0.18 >More info 0.52 >More info WT untreated none shoot Original data
142 root hypoxia p35S 0.54 >More info 0.15 >More info root hypoxia total hypoxia root Original data GEO bulk
143 Shoot apex inflorescence (after bolting) 0.04 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
144 seed germinating in countinuous light 24h SL 0.02 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
145 short 12-degree- 0.09 >More info 0.59 >More info control short Original data GEO bulk
146 toc1-1-73hr 0.12 >More info 0.52 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
147 Mh0 UV 0.11 >More info 0.52 >More info Mh0 mock UV seedling Original data
148 IAA7mII over-expressor IAA Treated -0.07 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
149 iron minus 24h -0.04 >More info -0.53 >More info iron +24h root Original data GEO bulk
150 EBE-XVE +estradiol 0.02 >More info 0.55 >More info WT-Col-0 +estradiol shoot Original data GEO bulk
151 Full C2 T3 -0.05 >More info -0.52 >More info C2 C2del and (As)AKiin11 control T3 three days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
152 myb3 myb3r4d 0.04 >More info 0.52 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
153 root - 04% oxygen - 2h -0.09 >More info 0.62 >More info root - 21% oxygen - 2h Original data GEO bulk
154 CCA1-ox 6am non-polysomal -0.03 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
155 roots ethylene -0.04 >More info 0.50 >More info roots air Original data GEO bulk
156 35S:VND7-VP16-GR+CHX -0.17 >More info 0.53 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
157 ABA 0.55 >More info -0.22 >More info control Original data GEO bulk