4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on clf-28 swn-7
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List of experiments correlated with "clf-28 swn-7"  Help Download transcriptome of top 30
Score Experiment Correlation from
clf-28 swn-7		 Correlation to
clf-28 swn-7		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 clf-28 swn-7 1.00 >More info 1.00 >More info Col whole plant Original data GEO bulk
2 GA4 3 h (ga1 seed) 0.84 >More info 0.83 >More info Mock 3 h Original data Effect of gibberellin during seed imbibition
3 ABA control 0.83 >More info 0.82 >More info No ABA control Original data GEO bulk
4 gul2-1 mutant 0.77 >More info 0.78 >More info WT 7 day-old whole seedlings Original data
5 estradiol induced LEC1 0.68 >More info 0.85 >More info control Original data GEO bulk
6 Estradiol4 days 0.68 >More info 0.85 >More info Col Original data GEO bulk
7 gul2-1 bri1-5 mutant 0.74 >More info 0.73 >More info WT 7 day-old whole seedlings Original data
8 phyABCDE Dark 0.73 >More info 0.73 >More info WT Dark Dark whole seedling Original data GEO bulk
9 rosettes myoox drought 0.63 >More info 0.81 >More info rosettes myoox watered Original data GEO bulk
10 ahg1-1 0.66 >More info 0.76 >More info ABA control Original data GEO bulk
11 embryo paclobutrazol 0.72 >More info 0.70 >More info embryo-control paclobutrazol embryo Original data GEO bulk
12 35S-MIF1 light grown 0.68 >More info 0.74 >More info Light-grown WT control Original data GEO bulk
13 hsfa1 quadruple mutant 0.73 >More info 0.68 >More info WT (Col-0) whole seedling Original data GEO bulk
14 embryo ABA 0.68 >More info 0.73 >More info embryo-control ABA embryo Original data GEO bulk
15 rosettes WT drought 0.65 >More info 0.75 >More info rosettes WT watered Original data GEO bulk
16 csn4-1 dark 0.75 >More info 0.63 >More info WT light Original data GEO bulk
17 fri-flc 0.68 >More info 0.69 >More info WT Original data GEO bulk
18 WT Seedling BL+ABA 0.67 >More info 0.70 >More info WT Seedling BL Original data GEO bulk
19 piffq 2d WL 0.59 >More info 0.78 >More info WT 2d WL whole seedling Original data GEO bulk
20 Ws seedlings 0.70 >More info 0.67 >More info ged1 seedlings Original data GEO bulk
21 ged1 seedlings -0.70 >More info -0.67 >More info Ws seedlings Original data GEO bulk
22 Imbibed 24 h ABA 30uM (seed) 0.61 >More info 0.75 >More info Imbibed 24 h (seed) Original data Effect of ABA during seed imbibition
23 2d dark-grown pif1pif3pif4pif5 (pifq) mutant -0.69 >More info -0.67 >More info 2d dark-grown WT seedling Original data GEO bulk
24 2d dark-grown pif1pif3pif4pif5 (pifq) mutant/1 hr
red light 		-0.69 >More info -0.66 >More info 2d dark-grown WT(Col-0)/1 hr red light Original data GEO bulk
25 csn5 (csn5a-2 csn5b) light 0.71 >More info 0.63 >More info WT light Original data GEO bulk
26 pab polysome 0.56 >More info 0.77 >More info WT polysome seedling shoot/aerial seedling Original data
27 phyABDE Dark 0.63 >More info 0.70 >More info WT Dark Dark whole seedling Original data GEO bulk
28 ARR21C-ox 0.67 >More info 0.66 >More info Col-0 Original data ARR21C overexpression
29 low water potential 0.62 >More info 0.68 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
30 Botrytis cinerea 48h 0.55 >More info 0.73 >More info control 48h Original data GEO bulk
31 csn3-1 light 0.64 >More info 0.63 >More info WT light Original data GEO bulk
32 WT Red light 18h -0.62 >More info -0.65 >More info WT Dark 18h deetiolated seedling Original data GEO bulk
33 sicy-192 cotyledons 0.62 >More info 0.65 >More info WT cotyledons cotyledons Original data
34 etiolated atbzip16 0.67 >More info 0.60 >More info etiolated Ler etiolated aerial part of seedlings Original data GEO bulk
35 ACN1-2 Sucrose -0.52 >More info -0.73 >More info Col-7 Sucrose Original data GEO bulk
36 Col-0 under 4 days salt 0.63 >More info 0.62 >More info Col-0 under control 4 days salt treatment rosette Original data
37 Osmotic Stress 24 h (shoot) 0.62 >More info 0.62 >More info Stress mock 24 h (shoot) Original data Stress treatments
38 Cor 10h 0.62 >More info 0.61 >More info Mock 10h Cor Original data GEO bulk
39 eif3h non-polysome 0.74 >More info 0.48 >More info WT non-polysome Original data GEO bulk
40 seedlings +5AC 0.64 >More info 0.58 >More info control seedlings 10-day old whole seedling Original data GEO bulk
41 Col-0 norflurazon 0.58 >More info 0.64 >More info Col-0 control Original data GEO bulk
42 ASL9-ox -0.64 >More info -0.58 >More info WT aerial parts of seedlings Original data GEO bulk
43 hai1-2 low water potential 0.53 >More info 0.67 >More info low water potential low water potential stress whole seedlings Original data GEO bulk
44 Heat no recovery 0.56 >More info 0.64 >More info Mock no recovery seedling Original data GEO bulk
45 WT light -0.65 >More info -0.55 >More info WT dark Original data GEO bulk
46 eif3h polysome 0.74 >More info 0.46 >More info WT polysome Original data GEO bulk
47 vte1-1 1d vernalization 0.59 >More info 0.61 >More info WT 1d vernalization Original data GEO bulk
48 rosettes drought 0.57 >More info 0.62 >More info rosettes watered Original data GEO bulk
49 Col-7 Sucrose 0.60 >More info 0.59 >More info col-7 Original data GEO bulk
50 dor drought 0.56 >More info 0.62 >More info WT drought Original data GEO bulk
51 MPK6 ox Shoot Hypoxia -0.53 >More info -0.65 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
52 35S-MIF1 dark grown 0.71 >More info 0.47 >More info Dark-grown WT control Original data GEO bulk
53 ice1 control 0.59 >More info 0.58 >More info WT control Original data GEO bulk
54 ice1 3H Cold 0.62 >More info 0.55 >More info WT 3H Cold Original data GEO bulk
55 aerial organ callus inducing medium 96 h 0.48 >More info 0.69 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
56 Col0-PsmES4326-24hpi 0.55 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
57 eif3h 0.70 >More info 0.46 >More info WT Original data GEO bulk
58 ABA DFPM 0.57 >More info 0.59 >More info control Original data GEO bulk
59 Sulfometuron EC50 0.59 >More info 0.56 >More info Carrier Original data GEO bulk
60 DC3000 7h 0.53 >More info 0.61 >More info Mock 7h DC3000 Original data GEO bulk
61 WT leaf-drought 0.56 >More info 0.58 >More info WT leaf-well watered Original data GEO bulk
62 C2 leaf-drought 0.58 >More info 0.56 >More info C2 leaf-well watered Original data GEO bulk
63 hsfa1 quadruple mutant heat shock 0.66 >More info 0.48 >More info WT (Col-0) heat shock whole seedling Original data GEO bulk
64 piffq 3d WL 0.50 >More info 0.64 >More info WT 3d WL whole seedling Original data GEO bulk
65 Laer pretreat GA Flg22 1h 0.43 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
66 Fenclorim 4hr 0.61 >More info 0.52 >More info Acetone 4hr root Original data GEO bulk
67 nia1nia2 0.65 >More info 0.48 >More info Col-0 whole seedlings Original data GEO bulk
68 Salt Stress 24 h (shoot) 0.53 >More info 0.59 >More info Stress mock 24 h (shoot) Original data Stress treatments
69 aox1a(line) MLD stressed 0.51 >More info 0.61 >More info WT(Col0) MLD stressed (control aox1a) leaf Original data
70 Col-0 low oxygen 0.49 >More info 0.63 >More info Col-0 Original data GEO bulk
71 Seedling KUA1-IOX est 0.44 >More info 0.67 >More info Seedling KUA1-IOX mock Original data
72 AvrRpt2 Col-0 6hpi 0.54 >More info 0.57 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
73 Col leaf scrape 5 dpi 0.62 >More info 0.49 >More info Col whole leaf 5d UI leaf section scrapes Original data GEO bulk
74 35S::Zat12+H2O2 0.57 >More info 0.54 >More info WT+H2O2 H2O2 Original data GEO bulk
75 eto1-4 +370 -0.63 >More info -0.48 >More info eto1-4 whole seedling Original data GEO bulk
76 ced1 -0.53 >More info -0.58 >More info WT PEG 6hr seedlings Original data GEO bulk
77 mdh 0.57 >More info 0.53 >More info Col Original data GEO bulk
78 shoot control pSultr2:2 -0.57 >More info -0.53 >More info shoot control total Original data GEO bulk
79 Differentiation 12h 0.51 >More info 0.59 >More info Differentiation 0h leaves Original data
80 nia1nia2noa1-2 0.61 >More info 0.49 >More info Col-0 whole seedlings Original data GEO bulk
81 ACN1-2 -0.37 >More info -0.73 >More info col-7 Original data GEO bulk
82 ice1 6H Cold 0.53 >More info 0.56 >More info WT 6H Cold Original data GEO bulk
83 T8 leaf-drought 0.54 >More info 0.55 >More info T8 leaf-well watered Original data GEO bulk
84 pnp1-1 3h +P 0.53 >More info 0.56 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
85 eto1-4 +393 -0.65 >More info -0.44 >More info eto1-4 whole seedling Original data GEO bulk
86 35:SUB1A 0.62 >More info 0.47 >More info WT whole seedling Original data GEO bulk
87 Col-0 drought 0.52 >More info 0.57 >More info Col-0 control Original data GEO bulk
88 sicy-192 gun1-101 cotyledons 0.62 >More info 0.47 >More info WT cotyledons cotyledons Original data
89 endosperm paclobutrazol 0.56 >More info 0.52 >More info endosperm-control paclobutrazol endosperm Original data GEO bulk
90 rosettes atx drought 0.56 >More info 0.52 >More info rosettes atx watered Original data GEO bulk
91 scrm-D:mute 0.55 >More info 0.53 >More info Col-0 WT whole seedling Original data GEO bulk
92 Col-0 leaf drought 0.50 >More info 0.58 >More info Col-0 leaf water leaf Original data GEO bulk
93 Dark 4 h pls RedLight 1min -0.42 >More info -0.66 >More info Dark 4 h Original data Light treatments
94 Imidazolinone EC50 0.49 >More info 0.59 >More info Carrier (Imidazolinone) Original data GEO bulk
95 siliques AtHb1 control 0.55 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
96 IMI 4mM 0.56 >More info 0.51 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
97 phyABCDE Rc50 -0.58 >More info -0.49 >More info phyABCDE Dark red light whole seedling Original data GEO bulk
98 CMP 24hr 0.48 >More info 0.59 >More info Acetone 24hr root Original data GEO bulk
99 rsa1 salt 12 h 0.53 >More info 0.53 >More info WT salt 12 h Salt with 120 mM NaCl for 24 h seedlings Original data GEO bulk
100 60m light 0.57 >More info 0.49 >More info before light whole seedlings Original data GEO bulk
101 abi3-6 16 DAF Seed -0.53 >More info -0.53 >More info WT (Col-0) 16 DAF Seed developing seeds dissected from sliques Original data
102 35S:RPS4 eds1-2 24h -0.55 >More info -0.50 >More info 35S:RPS4 24h leaves Original data
103 Laer treat paclobutrazol (PAC) 0.52 >More info 0.53 >More info Laer Control leaf discs Original data GEO bulk
104 dsr1 -0.44 >More info -0.61 >More info WT mock Whole seedling Original data GEO bulk
105 SPT4-R3 seedlings0 DAS 0.48 >More info 0.57 >More info Col-0 seedlings0 DAS seedlings Original data
106 WT Seedling BL -0.50 >More info -0.54 >More info WT Seedling Dark Original data GEO bulk
107 Cor hrpS 10h 0.56 >More info 0.48 >More info Mock 10h Cor hrpS Original data GEO bulk
108 DFPM 0.57 >More info 0.47 >More info control Original data GEO bulk
109 phr1 phl1 Root-Pi 0.51 >More info 0.53 >More info WT Shoot+Pi roots Original data GEO bulk
110 4d red light grown hmr-5 seedlings 0.59 >More info 0.45 >More info 4d red light grown WT(Col-0) seedlings Original data
111 35S::Zat12 0.54 >More info 0.50 >More info WT Original data GEO bulk
112 ataf1-1 mutant Col-0 Bgh inoculated 0.53 >More info 0.51 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
113 seed during stratification 1 h S 0.58 >More info 0.46 >More info Control for tissue data seed Original data GEO bulk
114 mkk1/mkk2 24h BTH rep 0.48 >More info 0.56 >More info Col-0 24h BTH rep Original data GEO bulk
115 piffq FR 1h 0.48 >More info 0.56 >More info WT FR 1h whole seedling Original data GEO bulk
116 aerial organ callus inducing medium 48 h 0.43 >More info 0.61 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
117 ARF10 -0.59 >More info -0.44 >More info Col-0 Original data GEO bulk
118 T6 leaf-drought 0.53 >More info 0.50 >More info T6 leaf-well watered Original data GEO bulk
119 Dark 3day ivd 0.58 >More info 0.45 >More info 0h ivd Original data
120 dry seed 0 h 0.58 >More info 0.45 >More info Control for tissue data seed Original data GEO bulk
121 seed freshly harvested H 0.58 >More info 0.45 >More info Control for tissue data seed Original data GEO bulk
122 Shoot -K 0.56 >More info 0.47 >More info Control-shoot Original data GEO bulk
123 col-5 DC3000 12h 0.52 >More info 0.51 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
124 Seedling-HeatStressed TOTALmRNA 0.58 >More info 0.45 >More info Seedling-control TOTALmRNA seedling Original data
125 HopZ1a treated 0.52 >More info 0.51 >More info col Original data GEO bulk
126 K starvation (shoot) 0.56 >More info 0.47 >More info Ws (shoot) Original data GEO bulk
127 pnp1-1 3h -P 0.46 >More info 0.57 >More info WT 3h -P No phosphate medium seedlings without roots Original data GEO bulk
128 RPL18 TuMV inoculated total RNA 0.45 >More info 0.58 >More info mock inoculated total RNA PO Original data GEO bulk
129 RPL18 TuMV inoculated polysomal RNA 0.47 >More info 0.56 >More info mock inoculated polysomal RNA PO Original data GEO bulk
130 Leafminer damaged seedlings 0.47 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
131 Leaf GLU1-KO 0.50 >More info 0.52 >More info Leaf Col(0) rosette leaves Original data GEO bulk
132 flu over-tAPX 0.53 >More info 0.49 >More info WT Col Original data GEO bulk
133 aerial organ callus inducing medium 24h 0.45 >More info 0.57 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
134 rsa3-1 Na 24h -0.57 >More info -0.44 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
135 Col-0 red light -0.54 >More info -0.47 >More info Col-0 dark Original data GEO bulk
136 gun5 norflurazon 0.55 >More info 0.46 >More info gun5 control Original data GEO bulk
137 seed during stratification 12 h S 0.58 >More info 0.43 >More info Control for tissue data seed Original data GEO bulk
138 col-5 hrpA 12h 0.52 >More info 0.49 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
139 Dark 4 h pls UV-A 5 min -0.37 >More info -0.64 >More info Dark 4 h Original data Light treatments
140 toc1-1-77hr 0.46 >More info 0.55 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
141 fil-8 yab3-2 0.45 >More info 0.56 >More info wt Apices Original data GEO bulk
142 pif3 Dark 0h -0.37 >More info -0.64 >More info WT Dark 0h etiolated seedling Original data GEO bulk
143 ice1 24H Cold 0.48 >More info 0.53 >More info WT 24H Cold Original data GEO bulk
144 WT seedlings MV 0.49 >More info 0.52 >More info WT seedlings control Seedlings Original data GEO bulk
145 LTN008-2 aza-dc 0.48 >More info 0.53 >More info LTN012-2 Mock Original data
146 Dark 3day wt 0.54 >More info 0.46 >More info 0h wt Original data
147 col 24h4c set4 0.51 >More info 0.49 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
148 6h +Pi -0.55 >More info -0.45 >More info 6h -Pi root Original data GEO bulk
149 Stem tissue 2 days NAA 0.48 >More info 0.52 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
150 frb1 mutant 0.48 >More info 0.52 >More info WT whole seedling Original data GEO bulk
151 Shoot -Cs 0.38 >More info 0.62 >More info Control-shoot Original data GEO bulk
152 WT powdery mildew 0.55 >More info 0.44 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
153 35S:RPS4 eds1-2 8h -0.55 >More info -0.44 >More info 35S:RPS4 8h leaves Original data
154 atr zebularine 0.66 >More info 0.33 >More info WT zebularine shoot apical meristem Original data
155 DC3000 24h 0.42 >More info 0.57 >More info Mock 24h DC3000 Original data GEO bulk
156 root endodermis and quiescent center 40 mM NaCl 0.30 >More info 0.69 >More info root endodermis and quiescent center Original data GEO bulk
157 RRE2 Chitin 0.55 >More info 0.43 >More info Chitin Original data GEO bulk
158 gun1-9 norflurazon 0.51 >More info 0.47 >More info gun1-9 control Original data GEO bulk
159 WT (Col-0) inflorescence drought day 10 0.51 >More info 0.47 >More info WT (Col-0) inflorescence well-watered day 10 Unopen flower buds Original data GEO bulk
160 0.2µM SMX -0.53 >More info -0.45 >More info control Whole seedling Original data GEO bulk
161 MPK6 ox Root Hypoxia -0.62 >More info -0.36 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
162 WT Col-0 Bgh inoculated 0.50 >More info 0.48 >More info WT Col-0 Un-inoculated Original data GEO bulk
163 eto1-4 0.68 >More info 0.30 >More info Col-0 whole seedling Original data GEO bulk
164 clf-28 0.20 >More info 0.78 >More info Col whole plant Original data GEO bulk
165 Ws HS 0.42 >More info 0.56 >More info Ws control heat shocked seedling Original data GEO bulk
166 pif3 Dark 1h -0.46 >More info -0.52 >More info WT Dark 1h etiolated seedling Original data GEO bulk
167 Fenclorim 24hr 0.59 >More info 0.38 >More info Acetone 24hr root Original data GEO bulk
168 ws 24h4c q8ws 0.53 >More info 0.44 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
169 ahg3-1 0.65 >More info 0.32 >More info ABA control Original data GEO bulk
170 ABA 3 h 0.43 >More info 0.54 >More info Mock 3 h Original data Basic hormone treatment of seedlings
171 PBZ 0.35 >More info 0.62 >More info none PBZ Rosette Original data GEO bulk
172 E.coli TUV86 2 fliC 7h 0.46 >More info 0.51 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
173 E2Fa-Dpa 0.40 >More info 0.57 >More info WT Original data GEO bulk
174 WT cold 0.46 >More info 0.51 >More info WT control All aerial tissue Original data GEO bulk
175 Seeds stage8 w/o siliques 0.60 >More info 0.36 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
176 Col-0 37C 0.52 >More info 0.44 >More info Col-0 22C Original data GEO bulk
177 seed during stratification 48 h S 0.55 >More info 0.41 >More info Control for tissue data seed Original data GEO bulk
178 Col dryseed 0.58 >More info 0.38 >More info Control for tissue data dry seeds Original data
179 Col-0 C2H4 24h 0.50 >More info 0.46 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
180 QK HS 0.46 >More info 0.50 >More info QK control heat shocked seedling Original data GEO bulk
181 sta1 0.38 >More info 0.58 >More info WT Original data GEO bulk
182 seed germinating in countinuous light 1 h SL 0.55 >More info 0.40 >More info Control for tissue data seed Original data GEO bulk
183 Ovary 0.53 >More info 0.42 >More info Seedling Original data GEO bulk
184 Seedling-HeatStressed POLYSOMESmRNA 0.52 >More info 0.43 >More info Seedling-control POLYSOMESmRNA seedling Original data
185 Norflurazon 0.34 >More info 0.61 >More info Col-0 Original data GEO bulk
186 short 12-degree- 0.37 >More info 0.58 >More info control short Original data GEO bulk
187 Norflurazon 0.34 >More info 0.61 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
188 red illumination +lincomycin 0.37 >More info 0.58 >More info red illumination -lincomycin Original data GEO bulk
189 npr1-1 SA -0.56 >More info -0.38 >More info Col-0 SA complete seedling Original data
190 WT flg22 2h 0.56 >More info 0.38 >More info WT 0h Leaf tissue Original data GEO bulk
191 aerial organ callus inducing medium 12 h 0.40 >More info 0.54 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
192 WT (Col-0) inflorescence drought day 5 0.50 >More info 0.44 >More info WT (Col-0) inflorescence well-watered day 5 Unopen flower buds Original data GEO bulk
193 Nicotinamide-81hr 0.53 >More info 0.41 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
194 rosette Dark Wounded 0.35 >More info 0.59 >More info rosette Dark Control Original data GEO bulk
195 Transgenic LEC2GR Seedling 4h Dex 0.38 >More info 0.55 >More info WT WS-O Seedling 4h Dex Original data GEO bulk
196 erf104-ko Flg22 4h 0.60 >More info 0.33 >More info erf104-ko H2O 4h Original data GEO bulk
197 E.coli 0157 H7 7h 0.41 >More info 0.52 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
198 vtc2 day 7 induction -0.55 >More info -0.37 >More info WT day 7 induction day 7 induction of somatic embryogenesis Original data GEO bulk
199 TNT-seedlings 0.30 >More info 0.62 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
200 SLWF infested 0.41 >More info 0.51 >More info SLWF uninfested rosette tissue Original data GEO bulk
201 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.51 >More info 0.40 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
202 FHY3p dark+DEX -0.51 >More info -0.40 >More info FHY3p dark+mock Original data GEO bulk
203 whole roots 140 mM NaCl 4 hour 0.38 >More info 0.53 >More info whole roots standard Original data GEO bulk
204 efr-1 +elf18 10h -0.41 >More info -0.50 >More info WT +elf18 10h elf18 Original data GEO bulk
205 NJ15 0.32 >More info 0.59 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
206 24h light (+Lincomycin) 0.34 >More info 0.56 >More info 24h light (-Lincomycin) seedlings Original data GEO bulk
207 Stigma 0.53 >More info 0.37 >More info Seedling Original data GEO bulk
208 Dark 2day wt 0.51 >More info 0.39 >More info 0h wt Original data
209 piffq FR 24h 0.36 >More info 0.54 >More info WT FR 24h whole seedling Original data GEO bulk
210 smg7b-1 0.38 >More info 0.52 >More info WT whole plant Original data GEO bulk
211 Glyphosate EC50 0.30 >More info 0.60 >More info Carrier (Glyphosate) Original data GEO bulk
212 pnp1-1 1wk +P 0.50 >More info 0.39 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
213 NahG 0.37 >More info 0.52 >More info Col-0 Leaves Original data GEO bulk
214 gh3.5-1D 48 hpi 0.36 >More info 0.53 >More info Col-0 uninoculated Original data GEO bulk
215 gid1a gid1b-1 gid1c-2 1 hr 100 uM GA3 0.35 >More info 0.54 >More info ga-1 1 hr 100 uM GA3 Original data GEO bulk
216 A2hsfa1-ox in quadruple mutant -0.63 >More info -0.25 >More info hsfa1 quadruple mutant whole seedling Original data GEO bulk
217 Dark 3day hml 0.50 >More info 0.38 >More info 0h hml Original data
218 PAHs stress 0.36 >More info 0.52 >More info exp control phenanthrene whole plants Original data GEO bulk
219 Col BTH 0.21 >More info 0.67 >More info Col rosettes Original data GEO bulk
220 Chitosan 3h Treatment 0.58 >More info 0.30 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
221 whole roots 140 mM NaCl 1 hour 0.31 >More info 0.56 >More info whole roots standard Original data GEO bulk
222 Heat shock 20%Inhibition 0.35 >More info 0.52 >More info Heat shock baseline Photosynthesis at 20% inhibition from optimum leaf first fully expanded Original data GEO bulk
223 pmr5 0.35 >More info 0.52 >More info Col-0 Original data GEO bulk
224 atr mitomycin C 0.51 >More info 0.35 >More info WT mitomycin C shoot apical meristem Original data
225 leaf -0.54 >More info -0.31 >More info Control for tissue data leaf Original data GEO bulk
226 ABA 1 h 0.29 >More info 0.56 >More info Mock 1 h Original data Basic hormone treatment of seedlings
227 apum23 0.34 >More info 0.51 >More info WT (Col-3) aerial parts Original data GEO bulk
228 OE-HRA1 2HS  0.58 >More info 0.27 >More info Col-0 2HS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
229 Expanding leaf -0.58 >More info -0.27 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
230 2hr continuous KNO3 ECR cell 0.23 >More info 0.62 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
231 NaCl Col 0.25 >More info 0.60 >More info Col Original data GEO bulk
232 Pto inoculated 0.51 >More info 0.33 >More info col Original data GEO bulk
233 ML (Mature leaves) 35DAS -0.55 >More info -0.29 >More info Control for tissue data Original data GEO bulk
234 Wounding Stress3 h (root) -0.28 >More info -0.56 >More info Stress mock 3 h (root) Original data Stress treatments
235 KAN1-GR 60min 0.34 >More info 0.50 >More info KAN1-GR 0min Original data GEO bulk
236 root endodermis and quiescent center pH4.6 0.27 >More info 0.57 >More info root endodermis and quiescent center pH5.7 Original data GEO bulk
237 ABI3GR +DEX +CHX 0.31 >More info 0.52 >More info ABI3GR -DEX +CHX DEX CHX root/protoplasts Original data GEO bulk
238 seedlings by volatiles from leafminer damaged
Lima bean 48h		 0.29 >More info 0.54 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
239 Apex octa 18DAS 0.25 >More info 0.58 >More info Apex Col 14DAS Original data GEO bulk
240 Nicotinamide-53hr 0.52 >More info 0.30 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
241 gun4-1 0.56 >More info 0.26 >More info WT Col-0 seedling Original data GEO bulk
242 OE-HRA1 NS  0.52 >More info 0.30 >More info Col-0NS 2 h non-stress (2NS) 7-day-old seedlings Original data
243 pab nonpolysome 0.29 >More info 0.53 >More info WT nonpolysome seedling shoot/aerial seedling Original data
244 seedling -0.59 >More info -0.23 >More info Control for tissue data seedling Original data GEO bulk
245 Distal half (leaf7) -0.54 >More info -0.27 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
246 Ambient CO2 fully expanded leaf -0.55 >More info -0.25 >More info Control for tissue data fully expanded leaf Original data
247 Ambient CO2 expanding leaf -0.56 >More info -0.24 >More info Control for tissue data expanding leaf Original data
248 Mature callus 0.30 >More info 0.50 >More info Young callus hypocotyls Original data GEO bulk
249 seed germinating in countinuous light 24h SL 0.13 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
250 Col-0 +lincomycin 0.26 >More info 0.54 >More info Col-0 -lincomycin Original data GEO bulk
251 WT Bc inoculation 14h 0.57 >More info 0.23 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
252 Red/FR Light45min 0.22 >More info 0.58 >More info FarRed Light 45min Original data Light treatments
253 ANAC102 over-expressor 0.23 >More info 0.57 >More info C24 Original data GEO bulk
254 Proximalhalf (leaf7) -0.53 >More info -0.26 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
255 irradiated leaf (WT 1d) 0.27 >More info 0.52 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
256 Laer Flg22 2h 0.58 >More info 0.21 >More info Laer Control leaf discs Original data GEO bulk
257 Mutant gh3.5-1D (AvrRpt2) 0.26 >More info 0.52 >More info Col-0 (AvrRpt2) Original data GEO bulk
258 Stem tissue 5 days NAA 0.25 >More info 0.53 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
259 Cotyledons -0.52 >More info -0.25 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
260 tfl1-1-16ºC -0.56 >More info -0.21 >More info WT-16ºC Original data GEO bulk
261 EL (leaves 1-2) 14DAS -0.50 >More info -0.27 >More info Control for tissue data Original data GEO bulk
262 GA3 3 h (ga1) -0.18 >More info -0.59 >More info Mock 3 h (ga1) Original data Basic hormone treatment of seedlings
263 Cd 24h root -0.27 >More info -0.50 >More info WT-Untreated Shoot Original data GEO bulk
264 Cambium 5 days NAA 0.27 >More info 0.50 >More info Stem tissue T0 Interfascicular cambium induced after 5 days NAA in vitro treatment laser capture microdissection Original data GEO bulk
265 9 hr Hypoxia 1 hr recovery Total RNA 0.27 >More info 0.50 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
266 CT101 ozone 0.51 >More info 0.25 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
267 Rosette leaf No2 -0.53 >More info -0.23 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
268 whole roots 140 mM NaCl 30 minutes 0.26 >More info 0.50 >More info whole roots standard Original data GEO bulk
269 SCR 96hr-S 0.26 >More info 0.50 >More info SCR 0hr endodermis Original data
270 FarRed Light 45min -0.09 >More info -0.66 >More info White Light 45min Original data Light treatments
271 Mutant iaa5_6_19 0.16 >More info 0.59 >More info Col Original data GEO bulk
272 WT NAA 2h -0.23 >More info -0.52 >More info WT 0h Leaf tissue Original data GEO bulk
273 Col whole leaf 3dpi 0.09 >More info 0.65 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
274 Heat shock optimum 0.09 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
275 wrky33 Bc inoculation 14h 0.50 >More info 0.23 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
276 AsAKiin11 T1 0.20 >More info 0.53 >More info C2 C2del and (As)AKiin11 control T1 one day post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
277 sfr3 cold 0.58 >More info 0.14 >More info WT-cold aerial tissues Original data GEO bulk
278 Rosette leaf No12 -0.52 >More info -0.20 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
279 atr mock 0.51 >More info 0.21 >More info WT mock shoot apical meristem Original data
280 root - 01% oxygen - 48h 0.21 >More info 0.51 >More info root - 21% oxygen - 48h Original data GEO bulk
281 Dry pre-dawn 0.19 >More info 0.53 >More info Wet pre-dawn water-limited whole rosette Original data GEO bulk
282 B5 +AA 0.54 >More info 0.17 >More info B5 -AA B5 media and treated with AA Original data
283 erf104-ko H2O 4h -0.52 >More info -0.19 >More info Col-0 H2O 4h Original data GEO bulk
284 C24-30min IAA -0.50 >More info -0.21 >More info C24-0h IAA whole plant Original data GEO bulk
285 phyABDE 4-day dark- 2 hours Rc50 0.65 >More info 0.05 >More info phyABDE Dark 4-day dark growth followed by 2 hours of red light whole seedling Original data GEO bulk
286 Petiol (leaf7) -0.52 >More info -0.18 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
287 WT cotyledons -0.51 >More info -0.18 >More info Control for tissue data cotyledons Original data
288 root - 08% oxygen - 30min 0.10 >More info 0.59 >More info root - 21% oxygen - 30min Original data GEO bulk
289 Cs shoot -0.10 >More info -0.59 >More info control shoot Original data GEO bulk
290 Leaf -0.53 >More info -0.15 >More info Control for tissue data leaf Original data GEO bulk
291 Nicotinamide-77hr 0.54 >More info 0.14 >More info WT-untreated-77hr nicotinamide aerial tissue Original data GEO bulk
292 light -0.50 >More info -0.18 >More info dark light seedling Original data GEO bulk
293 Cauline leaves -0.50 >More info -0.18 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
294 Col whole leaf 5 dpi 0.18 >More info 0.50 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
295 2hr transitory KNO3 ECR cell 0.18 >More info 0.50 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
296 Nicotinamide-85hr 0.50 >More info 0.16 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
297 Laer Flg22+GA 2h 0.51 >More info 0.15 >More info Laer Control leaf discs Original data GEO bulk
298 35S::ERF104 H2O 4h -0.53 >More info -0.13 >More info Col-0 H2O 4h Original data GEO bulk
299 opr3 JA 0.5 h -0.13 >More info -0.53 >More info opr3 0 h Original data GEO bulk
300 T101D 10mM NH4NO3 0.14 >More info 0.52 >More info col 10mM NH4NO3 Root Original data
301 IAA7mII over-expressor IAA Treated -0.03 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
302 Laer Flg22+GA 1h 0.54 >More info 0.11 >More info Laer Control leaf discs Original data GEO bulk
303 root - 01% oxygen - 2h 0.11 >More info 0.54 >More info root - 21% oxygen - 2h Original data GEO bulk
304 rosette leaves bdg 0.10 >More info 0.55 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
305 Laer Flg22 1h 0.56 >More info 0.08 >More info Laer Control leaf discs Original data GEO bulk
306 A2hsfa1-ox in quadruple mutant heat shock -0.52 >More info -0.12 >More info hsfa1 quadruple mutant heat shock whole seedling Original data GEO bulk
307 root - 04% oxygen - 2h 0.09 >More info 0.55 >More info root - 21% oxygen - 2h Original data GEO bulk
308 HSP90 Reduced RNAi-A3 0.55 >More info 0.08 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
309 bri1-116 -0.13 >More info 0.73 >More info Col seedling Original data GEO bulk
310 Col-0 Root 100 mM ATP 30 min -0.50 >More info -0.09 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
311 mpk6-ko H2O 4h -0.56 >More info -0.02 >More info Col-0 H2O 4h Original data GEO bulk
312 Aerobic e1 ate2 -0.01 >More info 0.59 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
313 cca1-lhy 60m light -0.51 >More info -0.04 >More info 60m light whole seedlings Original data GEO bulk
314 Dark 2day ivd 0.54 >More info -0.01 >More info 0h ivd Original data
315 pvip1 pvip2 seedling 0.55 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
316 Col-0 wt Hypoxic 0.02 >More info 0.50 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
317 DUO1 induced 6h -0.01 >More info 0.51 >More info 6hr-not-induced whole plant Original data GEO bulk
318 CCA1-ox 6am non-polysomal -0.04 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
319 root - 04% oxygen - 48h -0.13 >More info 0.58 >More info root - 21% oxygen - 48h Original data GEO bulk
320 Shoot apex inflorescence (after bolting) -0.21 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
321 P. infestans 6 h (leaf) 0.55 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
322 4d red light grown hmr-22 seedlings 0.58 >More info -0.21 >More info 4d red light grown WT(Col-0) seedlings Original data
323 Light 3day hml -0.31 >More info 0.60 >More info 0h hml Original data