4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on ice1 24H Cold
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "ice1 24H Cold"  Help Download transcriptome of top 30
Score Experiment Correlation from
ice1 24H Cold		 Correlation to
ice1 24H Cold		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 ice1 24H Cold 1.00 >More info 1.00 >More info WT 24H Cold Original data GEO bulk
2 ice1 6H Cold 0.91 >More info 0.92 >More info WT 6H Cold Original data GEO bulk
3 ice1 3H Cold 0.92 >More info 0.88 >More info WT 3H Cold Original data GEO bulk
4 ice1 control 0.90 >More info 0.88 >More info WT control Original data GEO bulk
5 scrm-D 0.84 >More info 0.81 >More info Col-0 WT whole seedling Original data GEO bulk
6 ceh1 mutant 0.71 >More info 0.76 >More info Parent line Original data
7 del1-1 mutant 5d uninfected 0.68 >More info 0.77 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
8 cop1 Seedling BL 0.71 >More info 0.74 >More info WT Seedling BL Original data GEO bulk
9 gh3.5-1D 48 hpi 0.76 >More info 0.66 >More info Col-0 uninoculated Original data GEO bulk
10 pvip1 pvip2 0.73 >More info 0.69 >More info Col-0 whole rosettes Original data GEO bulk
11 B.cinerea 18 h infection 0.67 >More info 0.75 >More info Mock 18 h Original data Botrytis cinerea infection
12 HopZ1a treated 0.70 >More info 0.72 >More info col Original data GEO bulk
13 Botrytis cinerea 18h 0.67 >More info 0.75 >More info control 18h Original data GEO bulk
14 IMI 4mM 0.73 >More info 0.67 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
15 scrm-D:mute 0.73 >More info 0.65 >More info Col-0 WT whole seedling Original data GEO bulk
16 HopZ1a treated ulp1c ulp1d 0.69 >More info 0.69 >More info col Original data GEO bulk
17 Elevated CO2 AMPLE N DAY 0.65 >More info 0.73 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
18 Botrytis cinerea 48h 0.69 >More info 0.68 >More info control 48h Original data GEO bulk
19 hrpA 7h 0.65 >More info 0.72 >More info Mock 7h hrpA Original data GEO bulk
20 ASL9-ox -0.71 >More info -0.66 >More info WT aerial parts of seedlings Original data GEO bulk
21 atmyc2 cop1 Seedling BL 0.65 >More info 0.72 >More info WT Seedling BL Original data GEO bulk
22 ataf1-1 mutant Col-0 Bgh inoculated 0.68 >More info 0.68 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
23 sta1 0.65 >More info 0.70 >More info WT Original data GEO bulk
24 msh1 albino 0.65 >More info 0.70 >More info WT aerial part Original data GEO bulk
25 sni1 0.60 >More info 0.75 >More info WT Original data GEO bulk
26 pnp1-1 1wk +P 0.70 >More info 0.65 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
27 hrpA fliC 7h 0.65 >More info 0.69 >More info Mock 7h hrpA fliC Original data GEO bulk
28 CLO 4mM 0.61 >More info 0.72 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
29 cpr5scv1 0.67 >More info 0.66 >More info WT(COL) Original data GEO bulk
30 GST NPP1 4 h (leaf) 0.66 >More info 0.67 >More info Mock 4 h (leaf) Original data Elicitor treatments
31 Col-0 9 hpi A. brassicicola 0.61 >More info 0.72 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
32 edr1 18 h powdery mildew 0.67 >More info 0.66 >More info Col-0 18 h powdery mildew Original data GEO bulk
33 Col whole leaf 7dpi 0.64 >More info 0.68 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
34 cpr5npr1svi1 0.64 >More info 0.68 >More info WT(COL) Original data GEO bulk
35 Sulfometuron EC50 0.66 >More info 0.66 >More info Carrier Original data GEO bulk
36 Flagellin 4 h (leaf) 0.63 >More info 0.69 >More info Mock 4 h (leaf) Original data Elicitor treatments
37 Col-0-avrB-6h 0.63 >More info 0.69 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
38 Elevated CO2 AMPLE N NIGHT 0.60 >More info 0.71 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
39 CMV-WT 0.68 >More info 0.63 >More info Mock-At Aerial tissues Original data GEO bulk
40 smg7b-1 0.68 >More info 0.63 >More info WT whole plant Original data GEO bulk
41 cpr5 0.67 >More info 0.64 >More info WT(COL) Original data GEO bulk
42 col-5 hrpA 12h 0.59 >More info 0.72 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
43 cpr5npr1 0.65 >More info 0.65 >More info WT(COL) Original data GEO bulk
44 Mature callus 0.67 >More info 0.63 >More info Young callus hypocotyls Original data GEO bulk
45 lht1 PstDC3000 48h 0.65 >More info 0.65 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
46 GST 4 h (leaf) 0.53 >More info 0.77 >More info Mock 4 h (leaf) Original data Elicitor treatments
47 PAHs stress 0.64 >More info 0.66 >More info exp control phenanthrene whole plants Original data GEO bulk
48 Col0-PsmES4326-24hpi 0.69 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
49 shoots bhlh100/101 0uM Fe 0.68 >More info 0.61 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
50 AvrRpt2 Col-0 6hpi 0.67 >More info 0.61 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
51 hrcC 0.61 >More info 0.67 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
52 Mutant gh3.5-1D (AvrRpt2) 0.68 >More info 0.60 >More info Col-0 (AvrRpt2) Original data GEO bulk
53 ARR21C-ox 0.71 >More info 0.57 >More info Col-0 Original data ARR21C overexpression
54 E.coli TUV86 2 fliC 7h 0.58 >More info 0.69 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
55 anac017-1 H2O2 3h -0.69 >More info -0.58 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
56 Col ozone 2d 0.63 >More info 0.64 >More info Col clean-air 2d ozone Original data GEO bulk
57 aerial organ callus inducing medium 96 h 0.61 >More info 0.66 >More info aerial organ callus inducing medium 0 h 96 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
58 pnp1-1 3h +P 0.64 >More info 0.62 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
59 Pto inoculated 0.66 >More info 0.60 >More info col Original data GEO bulk
60 35S:RPS4 eds1-2 24h -0.67 >More info -0.59 >More info 35S:RPS4 24h leaves Original data
61 WT-SA 0.63 >More info 0.63 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
62 efr-1 +elf18 10h -0.62 >More info -0.64 >More info WT +elf18 10h elf18 Original data GEO bulk
63 WT powdery mildew 0.60 >More info 0.66 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
64 mpk6-ko Flg22 4h 0.60 >More info 0.66 >More info mpk6-ko H2O 4h Original data GEO bulk
65 edr1 36 h powdery mildew 0.62 >More info 0.64 >More info Col-0 36 h powdery mildew Original data GEO bulk
66 35S::ERF104 Flg22 4h 0.61 >More info 0.65 >More info 35S::ERF104 H2O 4h Original data GEO bulk
67 WT Col-0 Bgh inoculated 0.59 >More info 0.67 >More info WT Col-0 Un-inoculated Original data GEO bulk
68 SLWF infested 0.58 >More info 0.68 >More info SLWF uninfested rosette tissue Original data GEO bulk
69 Lipopolysaccaride4 h (leaf) 0.57 >More info 0.69 >More info Mock 4 h (leaf) Original data Elicitor treatments
70 Cor 10h 0.62 >More info 0.63 >More info Mock 10h Cor Original data GEO bulk
71 WT 2-4h Xanthomonas 0.55 >More info 0.69 >More info WT T0 Original data GEO bulk
72 pmr5 pmr6 0.62 >More info 0.62 >More info Col-0 Original data GEO bulk
73 csn5 (csn5a-2 csn5b) light 0.63 >More info 0.61 >More info WT light Original data GEO bulk
74 mkk1/mkk2 24h BTH rep 0.65 >More info 0.59 >More info Col-0 24h BTH rep Original data GEO bulk
75 pepr1-1 Pepr2-3 +Pep2 2h -0.63 >More info -0.60 >More info WT +Pep2 2h Pep2 Original data GEO bulk
76 mkk1/mkk2 control rep 0.63 >More info 0.60 >More info Col-0 Time 0 rep Original data GEO bulk
77 8h-DC3000 avrRpm1 0.67 >More info 0.56 >More info 8h-DC3000 leaves Original data GEO bulk
78 Shoot -Cs 0.54 >More info 0.68 >More info Control-shoot Original data GEO bulk
79 E.coli 0157 H7 7h 0.57 >More info 0.65 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
80 albino Ds13-2198-1 -0.62 >More info -0.60 >More info control Original data GEO bulk
81 Col-0 48 hpi 0.63 >More info 0.59 >More info Col-0 uninoculated Original data GEO bulk
82 coi1-16 ein2 sid2 ctrl -0.70 >More info -0.52 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
83 Col whole leaf 5dpi 0.59 >More info 0.63 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
84 35S:RPS4 eds1-2 8h -0.64 >More info -0.58 >More info 35S:RPS4 8h leaves Original data
85 Leafminer damaged seedlings 0.65 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
86 ein2-1 9 hpi A. brassicicola 0.60 >More info 0.61 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
87 anac017-2 AntimycinA 3h -0.59 >More info -0.62 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
88 Glyphosate EC50 0.53 >More info 0.68 >More info Carrier (Glyphosate) Original data GEO bulk
89 aerial organ callus inducing medium 48 h 0.58 >More info 0.62 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
90 35S::PI ap3-3 35S::AP-GR +DEX 0.49 >More info 0.71 >More info 0hr DEX Original data GEO bulk
91 Elevated CO2 fully expanded leaf 0.61 >More info 0.58 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
92 S58-2 0.59 >More info 0.60 >More info wt Original data GEO bulk
93 Imidazolinone EC50 0.56 >More info 0.62 >More info Carrier (Imidazolinone) Original data GEO bulk
94 LTN008-2 aza-dc 0.64 >More info 0.54 >More info LTN012-2 Mock Original data
95 bZIP1ko mutant N+Light- 0.53 >More info 0.65 >More info WT-sib N+Light- whole plant Original data GEO bulk
96 +1.6 mM Tween 20 1 h. 0.39 >More info 0.79 >More info +distilled water 1 h. Original data GEO bulk
97 RPL18 TuMV inoculated polysomal RNA 0.61 >More info 0.57 >More info mock inoculated polysomal RNA PO Original data GEO bulk
98 DC3000 2 h (leaf) 0.58 >More info 0.60 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
99 RPL18 TuMV inoculated total RNA 0.58 >More info 0.60 >More info mock inoculated total RNA PO Original data GEO bulk
100 flu over-tAPX 0.59 >More info 0.59 >More info WT Col Original data GEO bulk
101 Mutant iaa17-6 0.57 >More info 0.60 >More info Col Original data GEO bulk
102 wrky33 Bc inoculation 14h 0.67 >More info 0.50 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
103 PBZ 0.58 >More info 0.59 >More info none PBZ Rosette Original data GEO bulk
104 CMV-A2b mutant 0.58 >More info 0.59 >More info Mock-At Aerial tissues Original data GEO bulk
105 cpr5 0.62 >More info 0.55 >More info WT seedling Original data GEO bulk
106 lht1 untreated 0.56 >More info 0.61 >More info WT untreated untreated leaf Original data GEO bulk
107 CMP 24hr 0.57 >More info 0.60 >More info Acetone 24hr root Original data GEO bulk
108 DC3000 24h 0.63 >More info 0.54 >More info Mock 24h DC3000 Original data GEO bulk
109 Chitosan 3h Treatment 0.61 >More info 0.56 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
110 Leafminer locally damaged thaliana seedlings 0.65 >More info 0.51 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
111 WT Bc inoculation 14h 0.67 >More info 0.49 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
112 Pst-DC3000(avrRpm1)-4hpi 0.61 >More info 0.55 >More info Pst-DC3000-4hpi Original data GEO bulk
113 rcf1-1 cold 12h 0.49 >More info 0.67 >More info WT cold 12 h cold at 4°C seedlings Original data GEO bulk
114 Col BTH 0.49 >More info 0.67 >More info Col rosettes Original data GEO bulk
115 Phaseolicola 2 h (leaf) 0.57 >More info 0.59 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
116 mil4 BTH 0.59 >More info 0.57 >More info Col BTH rosettes Original data GEO bulk
117 WT-NOCO2 INFECTED 0.59 >More info 0.57 >More info WT-MOCK Original data GEO bulk
118 DFPM 0.59 >More info 0.57 >More info control Original data GEO bulk
119 seedlings-week-old RECA1-overexpressing
transgenic		 0.57 >More info 0.59 >More info seedlings-week-old Col-0 seedlings Original data
120 bak1-3 +Pep2 10h 0.55 >More info 0.60 >More info WT +Pep2 10h Pep2 Original data GEO bulk
121 Leaf GLU1-KO 0.59 >More info 0.56 >More info Leaf Col(0) rosette leaves Original data GEO bulk
122 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.65 >More info 0.50 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
123 UV Stress 24 h (shoot) 0.49 >More info 0.66 >More info Stress mock 24 h (shoot) Original data Stress treatments
124 Starch sheath 5 days MS incubation 0.49 >More info 0.66 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
125 Primisulfuron EC50 0.51 >More info 0.63 >More info Carrier (primisulfuron) Original data GEO bulk
126 WT +elf18 10h 0.61 >More info 0.53 >More info WT untreated elf18 Original data GEO bulk
127 vte2-1 3d vernalization 0.53 >More info 0.61 >More info WT 3d vernalization Original data GEO bulk
128 gpa1-4/agb1-2 ozone 2d -0.53 >More info -0.61 >More info Col ozone 2d ozone Original data GEO bulk
129 sid2-1 cold -0.55 >More info -0.59 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
130 col-5 DC3000 12h 0.53 >More info 0.61 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
131 ARR22-ox (t-zeatin 3 h) 0.67 >More info 0.47 >More info Col-0 (t-zeatin 3 h) Original data Cytokinin treatment of seedlings
132 Cor hrpS 10h 0.67 >More info 0.46 >More info Mock 10h Cor hrpS Original data GEO bulk
133 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.65 >More info 0.48 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
134 wavy 0.54 >More info 0.59 >More info WT Original data GEO bulk
135 IRP1-OE-Fe--shoot 0.54 >More info 0.59 >More info COL-0-Fe--shoot shoot Original data
136 eds16 whole leaf 5dpi -0.49 >More info -0.64 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
137 flu 0.60 >More info 0.52 >More info WT Col Original data GEO bulk
138 Col-0 INA 48h 0.54 >More info 0.58 >More info Col-0 MOCK 48h Original data GEO bulk
139 Col-0 under 4 days salt 0.63 >More info 0.49 >More info Col-0 under control 4 days salt treatment rosette Original data
140 Mutant siz1-3 0.54 >More info 0.58 >More info Col-0 Original data GEO bulk
141 erf104-ko Flg22 4h 0.50 >More info 0.62 >More info erf104-ko H2O 4h Original data GEO bulk
142 siz1-3 control 0.54 >More info 0.58 >More info Col-0 control Original data GEO bulk
143 Te ozone 0.65 >More info 0.47 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
144 OH1 0.56 >More info 0.56 >More info Col-0 leaves Original data GEO bulk
145 nia1nia2 0.56 >More info 0.56 >More info Col-0 whole seedlings Original data GEO bulk
146 Differentiation 12h 0.49 >More info 0.63 >More info Differentiation 0h leaves Original data
147 npr1-1 SA -0.61 >More info -0.50 >More info Col-0 SA complete seedling Original data
148 treated group 0.62 >More info 0.49 >More info Control group Original data
149 irradiated leaf (cmt 1d) 0.50 >More info 0.61 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
150 pho1 0.63 >More info 0.48 >More info Col2WT Original data GEO bulk
151 gun1gun5 far-red pretreated -0.53 >More info -0.58 >More info WT far-red pretreated Original data GEO bulk
152 AgNO3 3 h 0.59 >More info 0.52 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
153 aerial organ callus inducing medium 24h 0.54 >More info 0.57 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
154 Col-0 C2H4 24h 0.57 >More info 0.54 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
155 Col-0 Flg22 4h 0.49 >More info 0.62 >More info Col-0 H2O 4h Original data GEO bulk
156 downy mildew cotyledons late stage 0.49 >More info 0.62 >More info mock inoculated Cotyledons Original data GEO bulk
157 myb3 myb3r4d 0.47 >More info 0.64 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
158 CT101 ozone 0.63 >More info 0.47 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
159 csn3-1 light 0.57 >More info 0.53 >More info WT light Original data GEO bulk
160 sid2 -0.50 >More info -0.60 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
161 aba3-1 0.52 >More info 0.58 >More info wt Original data GEO bulk
162 pnp1-1 3h -P 0.57 >More info 0.53 >More info WT 3h -P No phosphate medium seedlings without roots Original data GEO bulk
163 pmr5 0.52 >More info 0.58 >More info Col-0 Original data GEO bulk
164 Laer treat paclobutrazol (PAC) 0.57 >More info 0.53 >More info Laer Control leaf discs Original data GEO bulk
165 gh3.5D uninoculated -0.54 >More info -0.56 >More info Col-0 48 hpi Original data GEO bulk
166 WT 3h -P 0.48 >More info 0.62 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
167 col-5 hrpA 2h 0.49 >More info 0.61 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
168 S15-118 0.53 >More info 0.56 >More info wt Original data GEO bulk
169 Shoot -K 0.56 >More info 0.53 >More info Control-shoot Original data GEO bulk
170 K starvation (shoot) 0.56 >More info 0.53 >More info Ws (shoot) Original data GEO bulk
171 Mutant siz1-3 (Drought) 0.58 >More info 0.51 >More info Col-0 (Drought) Original data GEO bulk
172 siz1-3 drought 0.58 >More info 0.51 >More info Col-0 drought Original data GEO bulk
173 Triazolopyrimidine EC50 0.48 >More info 0.61 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
174 toc1-1-49hr 0.56 >More info 0.52 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
175 Col-0 ozone 0.65 >More info 0.43 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
176 UV 0.59 >More info 0.49 >More info WT aerial region Original data GEO bulk
177 aerial organ callus inducing medium 12 h 0.51 >More info 0.56 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
178 mbd6 mutant thaliana 10-day-old seedling 0.51 >More info 0.56 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
179 sdg2 0.54 >More info 0.53 >More info wt seedling Original data GEO bulk
180 coi1-16 ein2 sid2 ozone 0.65 >More info 0.42 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
181 WT 1wk -P 0.58 >More info 0.49 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
182 sfr3 cold 0.55 >More info 0.51 >More info WT cold All aerial tissue Original data GEO bulk
183 seedlings +5AC 0.55 >More info 0.51 >More info control seedlings 10-day old whole seedling Original data GEO bulk
184 rosette leaves fdh 0.54 >More info 0.52 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
185 cop1 Seedling BL+ABA 0.54 >More info 0.52 >More info WT Seedling BL+ABA Original data GEO bulk
186 penta Alternaria 3dpi 0.61 >More info 0.45 >More info Laer Alternaria 3dpi leaf discs Original data GEO bulk
187 Laer Alternaria 3dpi -0.45 >More info -0.61 >More info Laer Control leaf discs Original data GEO bulk
188 20d after anthesis 0.53 >More info 0.52 >More info 10d after anthesis senescing pod tissues of 20 days after anthesis Original data GEO bulk
189 pepr1-1 Pepr2-3 +Pep2 10h -0.50 >More info -0.55 >More info WT +Pep2 10h Pep2 Original data GEO bulk
190 CMP 4hr 0.54 >More info 0.51 >More info Acetone 4hr root Original data GEO bulk
191 Fenclorim 4hr 0.50 >More info 0.55 >More info Acetone 4hr root Original data GEO bulk
192 BLM+INA 0.52 >More info 0.53 >More info CK BLM and INA seedling Original data
193 Laer pretreat GA Flg22 1h 0.34 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
194 R. solani AG2-1 0.47 >More info 0.58 >More info control Rhizoctonia solani AG2-1 whole seedling Original data GEO bulk
195 mbd4 mutant thaliana 10-day-old seedling 0.51 >More info 0.53 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
196 eif3h 0.50 >More info 0.54 >More info WT Original data GEO bulk
197 vtc1 (II) 0.50 >More info 0.54 >More info Col (II) rosette Original data GEO bulk
198 seedlings by volatiles from leafminer damaged
Lima bean 48h		 0.52 >More info 0.52 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
199 R. solani AG8 0.50 >More info 0.54 >More info control Rhizoctonia solani AG8 whole seedling Original data GEO bulk
200 FOX line K19624 0.50 >More info 0.54 >More info empty vector control (T3) FOX lines Original data GEO bulk
201 miR393 flg22 2h 0.44 >More info 0.60 >More info WT 0h Leaf tissue Original data GEO bulk
202 AsAKiin11 T1 0.36 >More info 0.68 >More info C2 C2del and (As)AKiin11 control T1 one day post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
203 GRX-overexpression seedlings control 0.50 >More info 0.53 >More info WT seedlings control Seedlings Original data GEO bulk
204 Wounding Stress3 h (shoot) 0.49 >More info 0.54 >More info Stress mock 3 h (shoot) Original data Stress treatments
205 WT in -N 0.47 >More info 0.56 >More info WT in FN nitrogen depletion whole seedling Original data GEO bulk
206 bio4-1 mutant leaves 0.48 >More info 0.55 >More info WT leaves leaves Original data GEO bulk
207 DC3000 7h 0.48 >More info 0.55 >More info Mock 7h DC3000 Original data GEO bulk
208 35S-MIF1 dark grown 0.56 >More info 0.46 >More info Dark-grown WT control Original data GEO bulk
209 SA 4mM 0.66 >More info 0.36 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
210 Col whole leaf amplified 5 dpi 0.48 >More info 0.54 >More info Col whole leaf amplified 5d UI whole leaf Original data GEO bulk
211 Stem tissue 5 days NAA 0.42 >More info 0.60 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
212 1h light (+Lincomycin) 0.46 >More info 0.56 >More info 1h light (-Lincomycin) seedlings Original data GEO bulk
213 S14-150 0.38 >More info 0.64 >More info wt Original data GEO bulk
214 Constans-mutant 0.50 >More info 0.51 >More info Col control above-ground whole plant Original data GEO bulk
215 cat2-hCO2 -0.51 >More info -0.50 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
216 clf-28 swn-7 0.53 >More info 0.48 >More info Col whole plant Original data GEO bulk
217 upf3 0.59 >More info 0.42 >More info WT whole plant Original data GEO bulk
218 abi4 vtc2 (I) 0.52 >More info 0.49 >More info Col (I) rosette Original data GEO bulk
219 vtc2 (I) 0.49 >More info 0.52 >More info Col (I) rosette Original data GEO bulk
220 total mRNA eif3k 0.59 >More info 0.41 >More info total mRNA WT aerial part Original data GEO bulk
221 Mutant coi1(leaf) -0.52 >More info -0.48 >More info Col-0 (leaf) Original data GEO bulk
222 35:SUB1A 0.60 >More info 0.40 >More info WT whole seedling Original data GEO bulk
223 Nicotinamide-53hr 0.47 >More info 0.53 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
224 Cor 24h 0.49 >More info 0.51 >More info Mock 24h Cor Original data GEO bulk
225 Seedling KUA1-IOX est 0.46 >More info 0.54 >More info Seedling KUA1-IOX mock Original data
226 SPT4-R3 seedlings0 DAS 0.56 >More info 0.43 >More info Col-0 seedlings0 DAS seedlings Original data
227 petiole in D 0.50 >More info 0.49 >More info petiole in WL petioles Original data GEO bulk
228 rosette leaves lcr 0.51 >More info 0.48 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
229 AvrRpm1 2 h (leaf) 0.46 >More info 0.53 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
230 JMJ24 knockout 0.47 >More info 0.52 >More info WT Original data GEO bulk
231 ERF96OE 0.48 >More info 0.51 >More info WT leaf Original data
232 Mutant iaa5_6_19 0.41 >More info 0.57 >More info Col Original data GEO bulk
233 WT +elf18 2h 0.45 >More info 0.53 >More info WT untreated elf18 Original data GEO bulk
234 pad4-PsmES4326-24hpi -0.55 >More info -0.42 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
235 Mutant cry1 (High Light) -0.63 >More info -0.34 >More info Col-0 (High Light) Original data GEO bulk
236 apum23 0.51 >More info 0.46 >More info WT (Col-3) aerial parts Original data GEO bulk
237 cry1 high light -0.63 >More info -0.34 >More info Col-O high light Original data GEO bulk
238 tunicamycin -0.44 >More info -0.53 >More info DMF Original data GEO bulk
239 ulp1c ulp1d +Pto 0.45 >More info 0.52 >More info ulp1c ulp1d mock Original data GEO bulk
240 Heat shock optimum 0.32 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
241 rpl24 total 0.51 >More info 0.45 >More info WT total seedling shoot/aerial seedling Original data
242 Norflurazon 0.34 >More info 0.62 >More info Col-0 Original data GEO bulk
243 eds16 whole leaf 7d UI -0.39 >More info -0.57 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
244 cs26 short-day -0.46 >More info -0.50 >More info Leaves-WT-SD leaf Original data GEO bulk
245 Norflurazon 0.34 >More info 0.62 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
246 col-5 DC3000-avrRpm 4h 0.42 >More info 0.54 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
247 Osmotic Stress 24 h (shoot) 0.54 >More info 0.41 >More info Stress mock 24 h (shoot) Original data Stress treatments
248 smg5-2 0.59 >More info 0.36 >More info WT whole plant Original data GEO bulk
249 WT +Pep2 10h 0.54 >More info 0.41 >More info WT untreated Pep2 Original data GEO bulk
250 Col whole leaf 5 dpi 0.36 >More info 0.59 >More info Col whole leaf 5d UI whole leaf Original data GEO bulk
251 CAX1/CAX3 mutant 0.45 >More info 0.50 >More info Col whole plant Original data GEO bulk
252 WT roots - Fe 0.44 >More info 0.51 >More info WT roots + Fe Roots Original data GEO bulk
253 rcf1-1 cold 24h 0.42 >More info 0.53 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
254 C24 ozone 0.55 >More info 0.39 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
255 P.syringae AvrRpt2 4 h (leaf) 0.56 >More info 0.38 >More info Mock 4 h (leaf) Original data Elicitor treatments
256 Mutant iaa17-6 (IAA) 0.39 >More info 0.55 >More info Col (IAA) Original data GEO bulk
257 Ba1 UV 0.23 >More info 0.71 >More info Ba1 mock UV seedling Original data
258 mkk2 24h BTH rep 0.42 >More info 0.52 >More info Col-0 24h BTH rep Original data GEO bulk
259 Col-0 INA 6d 0.42 >More info 0.52 >More info Col-0 MOCK 6d Original data GEO bulk
260 Col laser microdissected 5 dpi 0.33 >More info 0.61 >More info Col laser microdissected 5d UI LMD leaf epidermal and mesophyll cells Original data GEO bulk
261 safener treated 0.44 >More info 0.50 >More info Col0 mock safener (mefenpyr and isoxadifen) rosette leaves Original data GEO bulk
262 Fenclorim 24hr 0.43 >More info 0.51 >More info Acetone 24hr root Original data GEO bulk
263 MYB46-GR DEX 0.26 >More info 0.67 >More info MYB46-GR mock Young rosette leaves (5-7th) Original data GEO bulk
264 anac017-2 H2O2 3h -0.59 >More info -0.34 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
265 sid2-2 9 hpi A. brassicicola 0.50 >More info 0.43 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
266 Col-Luc WT 3h antimycin A 0.43 >More info 0.50 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
267 seedlings protease IV 0.41 >More info 0.52 >More info seedlings nontreated control whole seedling Original data
268 upf1 0.56 >More info 0.36 >More info WT whole plant Original data GEO bulk
269 WT +Pep2 2h 0.57 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk
270 Col-0 DCA 48h 0.32 >More info 0.60 >More info Col-0 MOCK 48h Original data GEO bulk
271 Col ozone 3h 0.35 >More info 0.57 >More info Col clean-air 3h ozone Original data GEO bulk
272 ABA control 0.35 >More info 0.57 >More info No ABA control Original data GEO bulk
273 WT seedlings NaCl -0.31 >More info -0.61 >More info WT seedlings control Seedlings Original data GEO bulk
274 arf2 brz -0.33 >More info -0.58 >More info arf2 mock Original data GEO bulk
275 amiR-tor induced 3d 0.33 >More info 0.58 >More info amiR-tor 3d C 3 days estradiol-treated seedlings Original data GEO bulk
276 rsa3-1 Na 24h 0.31 >More info 0.60 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
277 Col-0 norflurazon 0.32 >More info 0.58 >More info Col-0 control Original data GEO bulk
278 FAMA induced 48h 0.50 >More info 0.39 >More info control 48h Whole seedling Original data GEO bulk
279 Mutant arf2-6 (IAA) -0.51 >More info -0.38 >More info Col (IAA) Original data GEO bulk
280 Elevated CO2 expanding leaf 0.37 >More info 0.52 >More info Ambient CO2 expanding leaf expanding leaf Original data
281 Mutant nph4-1_arf19-1 0.37 >More info 0.51 >More info Col Original data GEO bulk
282 long 14-degree- 0.38 >More info 0.50 >More info control long Original data GEO bulk
283 Col leaves 48h LT 0.37 >More info 0.51 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
284 spx1 spx2 complete 0.54 >More info 0.33 >More info WT complete seedlings Original data
285 GO5; 0h switch to ambient CO2 concentrations; -0.55 >More info -0.32 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
286 long 17-degree- 0.33 >More info 0.54 >More info control long Original data GEO bulk
287 cat2-2; 8h switch to ambient CO2 concentrations; 0.57 >More info 0.30 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
288 des1.1 0.29 >More info 0.58 >More info Leaves-WT leaf Original data GEO bulk
289 A6 mutant 0.33 >More info 0.53 >More info WT rosette leaves Rosette leaves Original data GEO bulk
290 WT Seedling BL -0.31 >More info -0.55 >More info WT Seedling Dark Original data GEO bulk
291 Methyl Jasmonate 1 h 0.50 >More info 0.36 >More info Mock 1 h Original data Basic hormone treatment of seedlings
292 edr1 0 h powdery mildew 0.36 >More info 0.50 >More info Col-0 0 h powdery mildew Original data GEO bulk
293 Whole root - low pH 48H 0.21 >More info 0.65 >More info Whole root - Std pH 48H pH 4.6 for 48 hr Original data GEO bulk
294 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.54 >More info -0.31 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
295 rosette leaves bdg 0.55 >More info 0.29 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
296 Col-0 low oxygen 0.34 >More info 0.50 >More info Col-0 Original data GEO bulk
297 oas-a1.1 Cd 18h 0.29 >More info 0.55 >More info Cd 18h root Root Original data GEO bulk
298 GO5; 8h switch to ambient CO2 concentrations; 0.28 >More info 0.56 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
299 pnp1-1 1wk -P 0.57 >More info 0.27 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
300 dense canopy 0.22 >More info 0.62 >More info single (control) petiole Original data GEO bulk
301 col-5 hrpA 4h 0.26 >More info 0.58 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
302 Atwrky63 -0.51 >More info -0.32 >More info Col0 none leaf Original data GEO bulk
303 35S-MIF1 light grown 0.50 >More info 0.33 >More info Light-grown WT control Original data GEO bulk
304 Col-0 drought 0.50 >More info 0.32 >More info Col-0 control Original data GEO bulk
305 Got7 UV 0.32 >More info 0.50 >More info Got7 mock UV seedling Original data
306 opr3 JA 2 h 0.25 >More info 0.57 >More info opr3 0 h Original data GEO bulk
307 JA 3h 0.19 >More info 0.61 >More info EtOH 3h 3hr Original data GEO bulk
308 IAA7mII over-expressor IAA Treated 0.11 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
309 Cambium 5 days NAA 0.29 >More info 0.50 >More info Stem tissue T0 Interfascicular cambium induced after 5 days NAA in vitro treatment laser capture microdissection Original data GEO bulk
310 siliques AtHb1 control 0.27 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
311 G3P 0.54 >More info 0.24 >More info Mock distal leaves Original data GEO bulk
312 miR393 0h -0.17 >More info -0.61 >More info WT 0h Leaf tissue Original data GEO bulk
313 sicy-192 cotyledons 0.24 >More info 0.54 >More info WT cotyledons cotyledons Original data
314 Ambient CO2 LIMITING N DAY 0.53 >More info 0.24 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
315 toc1-1-65hr 0.50 >More info 0.26 >More info WT-untreated-65hr none seedlings aerial tissue Original data GEO bulk
316 35SAvr 0.14 >More info 0.62 >More info Ecotype Col Original data GEO bulk
317 gpa1 -ABA GC -0.25 >More info -0.51 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
318 amiR-tor induced 6d 0.24 >More info 0.52 >More info amiR-tor 6d C 6 days estradiol-treated seedlings Original data GEO bulk
319 tmm1-inflorescence-tips 0.25 >More info 0.50 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
320 WT leaves - Fe 0.25 >More info 0.50 >More info WT leaves + Fe Leaves Original data GEO bulk
321 vte2 leaves 48h LT 0.52 >More info 0.21 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
322 Mutant ein2(leaf) -0.23 >More info -0.50 >More info Col-0 (leaf) Original data GEO bulk
323 ABA JA 24h 0.17 >More info 0.55 >More info EtOH 24h 24hr Original data GEO bulk
324 toc1-1-53hr 0.51 >More info 0.21 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
325 Mutant sav3-2 (WL) 0.15 >More info 0.57 >More info Col-0 (WL) Original data GEO bulk
326 pif4pif5 mut dark -0.22 >More info -0.50 >More info WT dark Original data GEO bulk
327 col-5 DC3000 4h 0.20 >More info 0.52 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
328 sav3-2 light 0.15 >More info 0.57 >More info Col-0 light seedlings Original data GEO bulk
329 dsr1 -0.15 >More info -0.55 >More info WT mock Whole seedling Original data GEO bulk
330 eds16 whole leaf 0h UI -0.18 >More info -0.52 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
331 toc1-1-77hr 0.58 >More info 0.11 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
332 SA Treated 0.61 >More info 0.08 >More info Water Original data GEO bulk
333 ABA 0.5 h -0.07 >More info -0.62 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
334 CeO2 germinant -0.14 >More info -0.54 >More info Millipore Water germinant CeO2 seedling Original data
335 pvip1 pvip2 seedling 0.68 >More info -0.02 >More info Col-0 seedling seedling Original data GEO bulk
336 Col-0 24hpi A. brassicicola 0.60 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
337 HairpinZ 4 h (leaf) 0.64 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
338 vte2 leaves 120h LT 0.57 >More info 0.04 >More info Col leaves 120h LT 12h 9-11th adult leaves Original data
339 Mutant cry1 -0.57 >More info -0.03 >More info Col-0 Original data GEO bulk
340 cry1 low light -0.57 >More info -0.03 >More info Col-O low light Original data GEO bulk
341 Estradiol4 days 0.08 >More info 0.52 >More info Col Original data GEO bulk
342 estradiol induced LEC1 0.08 >More info 0.52 >More info control Original data GEO bulk
343 opr3 OPDA 2 h -0.03 >More info 0.63 >More info opr3 0 h Original data GEO bulk
344 Col in Pi deficiency medium 0.08 >More info 0.50 >More info Col in control medium root Original data GEO bulk
345 Col PSTDC3000 24h 0.68 >More info -0.13 >More info Col 0h Leaf Original data GEO bulk
346 bri1-116 -0.19 >More info 0.73 >More info Col seedling Original data GEO bulk
347 mARF10 0.02 >More info 0.52 >More info Col-0 Original data GEO bulk
348 GRX-overexpression seedlings IAA -0.01 >More info -0.53 >More info WT seedlings IAA Seedlings Original data GEO bulk
349 Red/FR Light45min -0.03 >More info 0.54 >More info FarRed Light 45min Original data Light treatments
350 Truncated AC2 T2 -0.50 >More info 0.00 >More info AC2 and AC2del control T2 two days post infusion with Agrobacterium containing a truncated version of CaLCuV AC2 Arabidopsis rosette leaves Original data
351 P. infestans 6 h (leaf) 0.64 >More info -0.15 >More info Mock 6 h (leaf) Original data Elicitor treatments
352 seed germinating in countinuous light 24h SL -0.24 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
353 CCA1-ox 6am non-polysomal -0.11 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
354 Shoot apex inflorescence (after bolting) -0.31 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
355 Light 3day hml -0.32 >More info 0.61 >More info 0h hml Original data