4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on rcf1-1 cold 0h
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List of experiments correlated with "rcf1-1 cold 0h"  Help Download transcriptome of top 30
Score Experiment Correlation from
rcf1-1 cold 0h		 Correlation to
rcf1-1 cold 0h		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 rcf1-1 cold 0h 1.00 >More info 1.00 >More info WT cold 0h Control seedlings Original data GEO bulk
2 sta1 0.63 >More info 0.70 >More info WT Original data GEO bulk
3 rcf1-1 cold 12h 0.65 >More info 0.68 >More info WT cold 12 h cold at 4°C seedlings Original data GEO bulk
4 rcf1-1 cold 24h 0.58 >More info 0.64 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
5 msh1 recA3 untreated 0.55 >More info 0.66 >More info WT untreated above-ground parts Original data GEO bulk
6 ceh1 mutant 0.63 >More info 0.57 >More info Parent line Original data
7 Sulfometuron EC50 0.62 >More info 0.58 >More info Carrier Original data GEO bulk
8 ERF96OE 0.66 >More info 0.53 >More info WT leaf Original data
9 cdpk6-yfp 0.49 >More info 0.70 >More info Kan seedlings Original data GEO bulk
10 myb3 myb3r4d 0.36 >More info 0.82 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
11 35S::PI ap3-3 35S::AP-GR +DEX 0.48 >More info 0.69 >More info 0hr DEX Original data GEO bulk
12 pmr5 pmr6 0.57 >More info 0.58 >More info Col-0 Original data GEO bulk
13 UV Stress 24 h (shoot) 0.58 >More info 0.57 >More info Stress mock 24 h (shoot) Original data Stress treatments
14 Mutant coi1(leaf) -0.44 >More info -0.71 >More info Col-0 (leaf) Original data GEO bulk
15 ice1 control 0.60 >More info 0.53 >More info WT control Original data GEO bulk
16 Imidazolinone EC50 0.55 >More info 0.58 >More info Carrier (Imidazolinone) Original data GEO bulk
17 S58-2 0.54 >More info 0.59 >More info wt Original data GEO bulk
18 Triazolopyrimidine EC50 0.61 >More info 0.51 >More info Carrier (Triazolopyrimidine) Original data GEO bulk
19 shoot-10 μM DEX- 6 hr 0.46 >More info 0.65 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
20 IMI 4mM 0.50 >More info 0.61 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
21 ice1 6H Cold 0.53 >More info 0.57 >More info WT 6H Cold Original data GEO bulk
22 pnp1-1 3h +P 0.56 >More info 0.54 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
23 Shoot -Cs 0.45 >More info 0.63 >More info Control-shoot Original data GEO bulk
24 pmr5 0.46 >More info 0.62 >More info Col-0 Original data GEO bulk
25 S15-118 0.55 >More info 0.52 >More info wt Original data GEO bulk
26 Col BTH 0.40 >More info 0.67 >More info Col rosettes Original data GEO bulk
27 Elevated CO2 AMPLE N DAY 0.57 >More info 0.50 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
28 Col whole leaf 5dpi 0.54 >More info 0.52 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
29 Methyl Jasmonate 3 h 0.45 >More info 0.61 >More info Mock 3 h Original data Basic hormone treatment of seedlings
30 shoot-10 μM DEX- 24hr 0.40 >More info 0.65 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
31 Primisulfuron EC50 0.57 >More info 0.48 >More info Carrier (primisulfuron) Original data GEO bulk
32 Chitosan 3h Treatment 0.58 >More info 0.47 >More info No Chitosan Control chitosan treatment for 3 hours under continuous light. Original data GEO bulk
33 hrpA 7h 0.56 >More info 0.48 >More info Mock 7h hrpA Original data GEO bulk
34 upf3 0.56 >More info 0.48 >More info WT whole plant Original data GEO bulk
35 Col leaves 48h LT 0.50 >More info 0.53 >More info Col leaves 0h LT 48h 9-11th adult leaves Original data
36 Ba1 UV 0.31 >More info 0.72 >More info Ba1 mock UV seedling Original data
37 Laer pretreat GA Flg22 1h 0.32 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
38 apum23 0.49 >More info 0.54 >More info WT (Col-3) aerial parts Original data GEO bulk
39 shoots bhlh100/101 0uM Fe 0.56 >More info 0.46 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
40 pnp1-1 1wk +P 0.59 >More info 0.43 >More info WT 1wk +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
41 Glyphosate EC50 0.53 >More info 0.49 >More info Carrier (Glyphosate) Original data GEO bulk
42 Col0-PsmES4326-24hpi 0.41 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
43 S14-150 0.49 >More info 0.53 >More info wt Original data GEO bulk
44 shoot-10 μM DEX- 12 hr 0.38 >More info 0.64 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
45 sni1 0.51 >More info 0.50 >More info WT Original data GEO bulk
46 RPL18 TuMV inoculated total RNA 0.51 >More info 0.49 >More info mock inoculated total RNA PO Original data GEO bulk
47 DC3000 24h 0.43 >More info 0.57 >More info Mock 24h DC3000 Original data GEO bulk
48 del1-1 mutant 5d uninfected 0.51 >More info 0.48 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
49 cat2-hCO2 -0.52 >More info -0.47 >More info Col0-hCO2 grown for five weeks at high CO2 concentration (3000 ppm) in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
50 plant (tga2-5-6) 4h OPDA 0.55 >More info 0.44 >More info plant (tga2-5-6) 4h control Original data GEO bulk
51 BLM+INA 0.57 >More info 0.42 >More info CK BLM and INA seedling Original data
52 Mock pft1 leaf 0.28 >More info 0.71 >More info Mock Col-0 leaf water leaf Original data GEO bulk
53 WT roots - Fe 0.35 >More info 0.64 >More info WT roots + Fe Roots Original data GEO bulk
54 Col-0 under 4 days salt 0.56 >More info 0.42 >More info Col-0 under control 4 days salt treatment rosette Original data
55 35S:RPS4 eds1-2 24h -0.57 >More info -0.41 >More info 35S:RPS4 24h leaves Original data
56 Fenclorim 4hr 0.53 >More info 0.45 >More info Acetone 4hr root Original data GEO bulk
57 abi4 vtc2 (I) 0.59 >More info 0.39 >More info Col (I) rosette Original data GEO bulk
58 mbd4 mutant thaliana 10-day-old seedling 0.60 >More info 0.37 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
59 cpr5scv1 0.55 >More info 0.42 >More info WT(COL) Original data GEO bulk
60 D2O 0.56 >More info 0.41 >More info H2O seedling Original data GEO bulk
61 Shoot -P -0.42 >More info -0.55 >More info Shoot Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
62 red illumination +lincomycin 0.37 >More info 0.60 >More info red illumination -lincomycin Original data GEO bulk
63 sav1-1 light 0.35 >More info 0.62 >More info Col-0 light seedlings Original data GEO bulk
64 prors1-2 leaves 0.36 >More info 0.61 >More info Col-0 leaves leaves Original data
65 UV 0.53 >More info 0.43 >More info WT aerial region Original data GEO bulk
66 JA 3h 0.23 >More info 0.73 >More info EtOH 3h 3hr Original data GEO bulk
67 Elevated CO2 AMPLE N NIGHT 0.43 >More info 0.53 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
68 Leafminer damaged seedlings 0.39 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
69 vtc2 (I) 0.53 >More info 0.42 >More info Col (I) rosette Original data GEO bulk
70 Norflurazon 0.41 >More info 0.54 >More info Col-0 Original data GEO bulk
71 Norflurazon 0.41 >More info 0.54 >More info WT-Contrl a herbicide (Norflurazon) seedling Original data GEO bulk
72 sav1-1 shade 0.37 >More info 0.57 >More info Col-0 shade seedlings Original data GEO bulk
73 OPDA 4 h 0.40 >More info 0.53 >More info Col-0 Original data GEO bulk
74 plant (Col-0) 4h OPDA 0.40 >More info 0.53 >More info plant (Col-0) 4h control Original data GEO bulk
75 flu over-tAPX 0.35 >More info 0.58 >More info WT Col Original data GEO bulk
76 AFB1 0h 0.43 >More info 0.50 >More info Col 0h Leaf Original data GEO bulk
77 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.56 >More info 0.36 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
78 ara1/2mut 0.13 >More info 0.79 >More info Col-3 Original data GEO bulk
79 Ws leaf 100mM NaCl 0.41 >More info 0.51 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
80 Ws 100mM NaCl 0.41 >More info 0.51 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
81 WT 30μM phosphate 8 hours. 0.32 >More info 0.60 >More info WT control (not supplemented). Original data
82 seedlings by volatiles from leafminer damaged
Lima bean 48h		 0.56 >More info 0.35 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
83 OsSAP11 expressing -0.39 >More info -0.52 >More info WT seedlings Original data GEO bulk
84 Col-0 48 hpi 0.38 >More info 0.53 >More info Col-0 uninoculated Original data GEO bulk
85 SA 4mM 0.58 >More info 0.33 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
86 flu 0.34 >More info 0.57 >More info WT Col Original data GEO bulk
87 Aerobic prt6 0.30 >More info 0.61 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
88 aerial organ callus inducing medium 12 h 0.52 >More info 0.38 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
89 Heat shock optimum 0.25 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
90 AsAKiin11 T1 0.38 >More info 0.52 >More info C2 C2del and (As)AKiin11 control T1 one day post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
91 PBZ 0.34 >More info 0.55 >More info none PBZ Rosette Original data GEO bulk
92 35S::HRE2 Hypoxic -0.39 >More info -0.50 >More info Col-0 wt Hypoxic hypoxic treatment Original data GEO bulk
93 WT Bc inoculation 14h 0.58 >More info 0.31 >More info WT mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
94 leaf blade in D 0.32 >More info 0.56 >More info leaf blade in WL leaf blades Original data GEO bulk
95 del1-1 5dpi 0.52 >More info 0.36 >More info Col-0 5dpi mature fully expanded leaves Original data GEO bulk
96 coi1-16 ein2 sid2 ctrl -0.50 >More info -0.38 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
97 atmyc2 cop1 Seedling BL 0.36 >More info 0.52 >More info WT Seedling BL Original data GEO bulk
98 upf1 0.52 >More info 0.35 >More info WT whole plant Original data GEO bulk
99 roottip hypoxia total 0.26 >More info 0.61 >More info roottip control total Original data GEO bulk
100 Col leaf 100mM NaCl 0.37 >More info 0.50 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
101 Col leaf 100mM NaCl 0.37 >More info 0.50 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
102 Col 100mM NaCl 0.37 >More info 0.50 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
103 cpr5 0.55 >More info 0.31 >More info WT(COL) Original data GEO bulk
104 Selenate (root) 0.32 >More info 0.54 >More info Ws (root) Original data GEO bulk
105 Root Selenate 0.32 >More info 0.54 >More info Root control 40 micromolar selenate Root Original data GEO bulk
106 wrky33 Bc inoculation 14h 0.54 >More info 0.31 >More info wrky33 mock 14 hour post inoculation with spores of Botrytis cinerea 2100 leaves Original data
107 Methyl Jasmonate 1 h 0.29 >More info 0.55 >More info Mock 1 h Original data Basic hormone treatment of seedlings
108 rao2 H2O2 3h -0.31 >More info -0.53 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
109 atsf1-2 mutant seedling 0.34 >More info 0.50 >More info Col-0 seedling seedlings Original data
110 seedlings-week-old RECA1-overexpressing
transgenic		 0.30 >More info 0.54 >More info seedlings-week-old Col-0 seedlings Original data
111 1 h Light Total RNA -0.22 >More info -0.62 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
112 Rose Bengal 0.5 uM 0.29 >More info 0.54 >More info Control RB and PER Rose Bengal Original data
113 CMV-A2b mutant 0.23 >More info 0.60 >More info Mock-At Aerial tissues Original data GEO bulk
114 SLWF infested 0.50 >More info 0.32 >More info SLWF uninfested rosette tissue Original data GEO bulk
115 Aerobic e1 ate2 0.27 >More info 0.54 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
116 toc1-1-77hr 0.55 >More info 0.25 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
117 Hypoxic e1 ate 0.27 >More info 0.53 >More info Hypoxic Col-0 hypoxic conditions seedlings Original data GEO bulk
118 seedling 3h after Gamma WT 0.25 >More info 0.55 >More info seedling day 1 unirradiated WT 3h Original data
119 MPK6 ox Shoot Hypoxia 0.08 >More info 0.72 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
120 Elevated CO2 fully expanded leaf 0.52 >More info 0.27 >More info Ambient CO2 fully expanded leaf fully expanded leaf Original data
121 MPK6 ox Root Hypoxia 0.15 >More info 0.64 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
122 Mutant siz1-3 (Drought) 0.50 >More info 0.28 >More info Col-0 (Drought) Original data GEO bulk
123 siz1-3 drought 0.50 >More info 0.28 >More info Col-0 drought Original data GEO bulk
124 Protoplast Induced 0.24 >More info 0.54 >More info Uninduced Original data GEO bulk
125 30m light -0.27 >More info -0.51 >More info before light whole seedlings Original data GEO bulk
126 current injection 0.21 >More info 0.56 >More info no current injection 4 microampere of electric current for 1 second Original data GEO bulk
127 cpr5npr1 0.50 >More info 0.26 >More info WT(COL) Original data GEO bulk
128 Full C2 T3 -0.23 >More info -0.53 >More info C2 C2del and (As)AKiin11 control T3 three days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
129 camta3-1 0.50 >More info 0.25 >More info WT Original data GEO bulk
130 Methyl Jasmonate 0.5 h 0.13 >More info 0.62 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
131 Ibuprofen 3 h 0.17 >More info 0.58 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
132 eds16 whole leaf 1dpi 0.19 >More info 0.56 >More info Col whole leaf 1dpi whole leaf Original data GEO bulk
133 opr3 JA 0.5 h 0.03 >More info 0.72 >More info opr3 0 h Original data GEO bulk
134 pnp1-1 1wk -P 0.55 >More info 0.19 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
135 Dry midday -0.21 >More info -0.53 >More info Wet midday water-limited whole rosette Original data GEO bulk
136 high R/FR JA spray 0.18 >More info 0.56 >More info high R/FR mock spray high R/FR JA spray Original data GEO bulk
137 atmospheric CO2 low Mg shoot 0.56 >More info 0.17 >More info atmospheric CO2 normal Mg shoot Shoot Original data
138 spx1 spx2 complete 0.52 >More info 0.21 >More info WT complete seedlings Original data
139 auxin and brassinazole seedlings 0.51 >More info 0.22 >More info auxin seedlings Original data GEO bulk
140 CLO 4mM 0.60 >More info 0.12 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
141 abi1 hypocotyl 0.18 >More info 0.54 >More info Ler hypocotyl hypocotyl Original data GEO bulk
142 Col-0 INA 6d 0.54 >More info 0.17 >More info Col-0 MOCK 6d Original data GEO bulk
143 siliques AtHb1 control 0.19 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
144 root - 01% oxygen - 2h 0.14 >More info 0.55 >More info root - 21% oxygen - 2h Original data GEO bulk
145 pab polysome -0.00 >More info -0.69 >More info WT polysome seedling shoot/aerial seedling Original data
146 xyl-grown cell culture- 1h 1mM Fru -0.09 >More info -0.60 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
147 PNO8 3 h 0.15 >More info 0.53 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
148 OsTOP6B ox 0.50 >More info 0.18 >More info WT Original data GEO bulk
149 bri1-116 -0.05 >More info 0.73 >More info Col seedling Original data GEO bulk
150 HRE1-RNAi20 normoxia -0.16 >More info -0.51 >More info Col upon normoxia normoxia seedling roots Original data GEO bulk
151 4C 1h 0.13 >More info 0.54 >More info 4C 0h Original data GEO bulk
152 Inflorescences Trp1 0.15 >More info 0.52 >More info Inflorescences ler inflorescences Original data GEO bulk
153 Col-0 2HS 0.17 >More info 0.50 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
154 35S:VND7-VP16-GR+CHX 0.50 >More info 0.16 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
155 seed germinating in countinuous light 24h SL -0.01 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
156 CCA1-ox 6am non-polysomal 0.15 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
157 Got7 UV 0.06 >More info 0.60 >More info Got7 mock UV seedling Original data
158 IAA7mII over-expressor IAA Treated -0.03 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
159 seedling -S Exp 0.12 >More info 0.53 >More info seedling FN Exp seedling Original data
160 atmyc2 Seedling BL -0.04 >More info -0.59 >More info WT Seedling BL Original data GEO bulk
161 opr3 OPDA 2 h -0.04 >More info 0.66 >More info opr3 0 h Original data GEO bulk
162 5-Triiodobenzoic acid3 h 0.07 >More info 0.54 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
163 Red/FR Light45min 0.06 >More info 0.55 >More info FarRed Light 45min Original data Light treatments
164 Col-0 24hpi A. brassicicola 0.58 >More info 0.02 >More info Col-0 24hpi mock 3rd-5th true leaves Original data
165 2xX4x interploidy cross 0.08 >More info 0.52 >More info 2xX2x cross Original data GEO bulk
166 cat2-2; harvested 8h continiously maintained in
high CO2;		 -0.53 >More info -0.04 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
167 mdh -0.02 >More info -0.55 >More info Col Original data GEO bulk
168 Leaf wounded -0.01 >More info 0.57 >More info Leaf control vegetative leaf Original data GEO bulk
169 WT Root Hypoxia -0.01 >More info 0.54 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
170 root longitudinal zone-2 -Fe -0.11 >More info 0.63 >More info root longitudinal zone-2 standard Original data GEO bulk
171 ACN1-2 Sucrose -0.06 >More info 0.55 >More info Col-7 Sucrose Original data GEO bulk
172 Shoot apex inflorescence (after bolting) -0.18 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
173 ACN1-2 -0.16 >More info 0.62 >More info col-7 Original data GEO bulk
174 ABA JA 24h -0.18 >More info 0.56 >More info EtOH 24h 24hr Original data GEO bulk
175 ABA control 0.15 >More info -0.51 >More info No ABA control Original data GEO bulk