4.0:Analysis result - correlation network
Home
Method
Manual
History
Module-based correlation network(MCN) centered on Hypoxic e1 ate
> How to read results
Simple
All
>>Show Interactive view (test)
List of experiments correlated with "Hypoxic e1 ate"
Download transcriptome of top 30
Score
Experiment
Correlation from
Hypoxic e1 ate
Correlation to
Hypoxic e1 ate
Control Experiment
Genotype
Treatment
Tissue
Link to
original data
Experimental
Category
Data set
Details
1
Hypoxic e1 ate
1.00
>More info
1.00
>More info
Hypoxic Col-0
hypoxic conditions
seedlings
Original data
GEO bulk
2
Hypoxic prt6
0.92
>More info
0.89
>More info
Hypoxic Col-0
hypoxic conditions
seedlings
Original data
GEO bulk
3
Aerobic e1 ate2
0.87
>More info
0.84
>More info
Aerobic Col-0
aerobic (normal) conditions
seedlings
Original data
GEO bulk
4
Aerobic prt6
0.91
>More info
0.76
>More info
Aerobic Col-0
aerobic (normal) conditions
seedlings
Original data
GEO bulk
5
root - 04% oxygen - 48h
0.61
>More info
0.71
>More info
root - 21% oxygen - 48h
Original data
GEO bulk
6
Prohexadione 3 h
-0.51
>More info
-0.66
>More info
Mock 3 h
Original data
Effect of GA inhibitors on seedlings
7
Norflurazon
0.59
>More info
0.56
>More info
Col-0
Original data
GEO bulk
8
Norflurazon
0.59
>More info
0.56
>More info
WT-Contrl
a herbicide (Norflurazon)
seedling
Original data
GEO bulk
9
root - 08% oxygen - 48h
0.54
>More info
0.56
>More info
root - 21% oxygen - 48h
Original data
GEO bulk
10
PNO8 12 h
-0.50
>More info
-0.55
>More info
Mock 12 h
Original data
Effect of other inhibitors on seedlings
11
ein2 mutant roots mock
-0.45
>More info
-0.60
>More info
roots mock
Original data
GEO bulk
12
ein2-1 +Pep2 2h
-0.57
>More info
-0.47
>More info
WT +Pep2 2h
Pep2
Original data
GEO bulk
13
root - 01% oxygen - 48h
0.34
>More info
0.70
>More info
root - 21% oxygen - 48h
Original data
GEO bulk
14
mbd4 mutant thaliana 10-day-old seedling
0.53
>More info
0.50
>More info
WT thaliana 10-day-old seedling
10 days old seedling
Original data
15
ABA 3 h
-0.51
>More info
-0.50
>More info
Mock 3 h
Original data
Basic hormone treatment of seedlings
16
mdh
-0.41
>More info
-0.60
>More info
Col
Original data
GEO bulk
17
ABA control
-0.32
>More info
-0.67
>More info
No ABA control
Original data
GEO bulk
18
Ws seedlings
-0.55
>More info
-0.43
>More info
ged1 seedlings
Original data
GEO bulk
19
ged1 seedlings
0.55
>More info
0.43
>More info
Ws seedlings
Original data
GEO bulk
20
Shoot apex inflorescence (after bolting)
0.32
>More info
0.65
>More info
Control for tissue data
Original data
Developmental series; organs / tissues at different ages
21
swn-7
0.33
>More info
0.63
>More info
Col
whole plant
Original data
GEO bulk
22
MPK6 ox Shoot Hypoxia
0.34
>More info
0.62
>More info
WT Shoot Normoxia (mock)
Hypoxia
Shoot
Original data
GEO bulk
23
ACN1-2 Sucrose
0.36
>More info
0.59
>More info
Col-7 Sucrose
Original data
GEO bulk
24
root - 04% oxygen - 2h
0.41
>More info
0.53
>More info
root - 21% oxygen - 2h
Original data
GEO bulk
25
lib
0.55
>More info
0.38
>More info
WT
whole seedling
Original data
GEO bulk
26
ubc13A-es
-0.57
>More info
-0.36
>More info
Col-es
root
Original data
GEO bulk
27
MPK6 ox Root Hypoxia
0.42
>More info
0.51
>More info
WT Root Normoxia (mock)
Hypoxia
Root
Original data
GEO bulk
28
whole roots 140 mM NaCl 4 hour
-0.30
>More info
-0.62
>More info
whole roots standard
Original data
GEO bulk
29
Stem tissue 5 days NAA
0.34
>More info
0.55
>More info
Stem tissue T0
Stem tissue with NAA treatment
Stem tissue with NAA treatment
Original data
GEO bulk
30
bri1-116
0.16
>More info
0.73
>More info
Col
seedling
Original data
GEO bulk
31
seed germinating in countinuous light 24h SL
0.20
>More info
0.67
>More info
Control for tissue data
seed
Original data
GEO bulk
32
ABA
-0.61
>More info
-0.22
>More info
control
Original data
GEO bulk
33
slr-1 0h NAA
0.31
>More info
0.51
>More info
Col-0 0h NAA
Original data
GEO bulk
34
pab polysome
-0.29
>More info
-0.53
>More info
WT polysome
seedling shoot/aerial seedling
Original data
35
Prohexadione 12 h
-0.50
>More info
-0.31
>More info
Mock 12 h
Original data
Effect of GA inhibitors on seedlings
36
Col BTH
0.14
>More info
0.67
>More info
Col
rosettes
Original data
GEO bulk
37
rcf1-1 cold 0h
0.53
>More info
0.27
>More info
WT cold 0h
Control
seedlings
Original data
GEO bulk
38
expressing C2 Mock
0.09
>More info
0.71
>More info
LUC2C
Original data
GEO bulk
39
PRR5-VP 12h light on
-0.53
>More info
-0.26
>More info
WT 12h light on
whole plant
Original data
GEO bulk
40
Cs root
-0.50
>More info
-0.27
>More info
control root
Original data
GEO bulk
41
ABA DFPM
-0.50
>More info
-0.27
>More info
control
Original data
GEO bulk
42
embryo ABA
-0.51
>More info
-0.25
>More info
embryo-control
ABA
embryo
Original data
GEO bulk
43
root longitudinal zone-4 NaCl
-0.24
>More info
-0.51
>More info
root longitudinal zone-4
Original data
GEO bulk
44
WT(Ler) Rc15
-0.56
>More info
-0.17
>More info
WT(Ler) Dark
Original data
GEO bulk
45
WT 3h -P
0.16
>More info
0.56
>More info
WT 3h +P
No phosphate medium
seedlings without roots
Original data
GEO bulk
46
hog1-7
0.52
>More info
0.20
>More info
wt
whole seedling
Original data
GEO bulk
47
pip3 At2g19270 TDNA 6h-1
-0.50
>More info
-0.22
>More info
Col-0
whole plant
Original data
GEO bulk
48
mutant-line774
0.52
>More info
0.20
>More info
WT-control
whole plant
Original data
GEO bulk
49
21h-DC3000 hrpA
0.12
>More info
0.58
>More info
21h-DC3000
leaves
Original data
GEO bulk
50
Callus
0.52
>More info
0.17
>More info
Control for tissue data
callus
Original data
GEO bulk
51
Heat shock optimum
0.04
>More info
0.65
>More info
Heat shock baseline
Photosynthesis at optimum temperature
leaf first fully expanded
Original data
GEO bulk
52
ABA 0.5 h
-0.18
>More info
-0.50
>More info
Mock 0.5 h
Original data
Basic hormone treatment of seedlings
53
pnp1-1 3h +P
0.17
>More info
0.50
>More info
WT 3h +P
Full nutrient medium (+P)
seedlings without roots
Original data
GEO bulk
54
Col-0 +lincomycin
0.52
>More info
0.14
>More info
Col-0 -lincomycin
Original data
GEO bulk
55
abi4-102 -lincomycin
0.50
>More info
0.16
>More info
Col-0 -lincomycin
Original data
GEO bulk
56
Laer pretreat GA Flg22 1h
-0.06
>More info
0.71
>More info
Laer pretreat water control
leaf discs
Original data
GEO bulk
57
WT Root-Pi
-0.53
>More info
-0.11
>More info
WT Root+Pi
roots
Original data
GEO bulk
58
rcf1-1 cold 12h
0.53
>More info
0.11
>More info
WT cold 12 h
cold at 4°C
seedlings
Original data
GEO bulk
59
G3P
0.09
>More info
0.55
>More info
Mock
distal leaves
Original data
GEO bulk
60
ddm1 mutant seedlings
-0.50
>More info
-0.13
>More info
control seedlings
10-day old whole seedling
Original data
GEO bulk
61
IAA7mII over-expressor IAA Treated
-0.07
>More info
0.69
>More info
empty vector IAA Treated
Original data
GEO bulk
62
phr1 Root-Pi
-0.53
>More info
-0.08
>More info
WT Root+Pi
roots
Original data
GEO bulk
63
chito-octamer
-0.54
>More info
-0.05
>More info
Col Mock
Original data
GEO bulk
64
21h-DC3000 avrRpm1
0.03
>More info
0.55
>More info
21h-DC3000
leaves
Original data
GEO bulk
65
intact root control
0.50
>More info
0.05
>More info
Control for tissue data
mock
whole root
Original data
GEO bulk
66
WT(Ler) Rc50
-0.52
>More info
-0.01
>More info
WT(Ler) Dark
Original data
GEO bulk
67
CCA1-ox 6am non-polysomal
0.01
>More info
0.51
>More info
WT 6am non-polysomal
aerial part
Original data
68
Leafminer damaged seedlings
-0.05
>More info
0.56
>More info
Healthy seedlings
leaves
Original data
GEO bulk
69
Col0-PsmES4326-24hpi
-0.21
>More info
0.61
>More info
Col0-mock-24hpi
leaf
Original data
GEO bulk
70
siliques AtHb1 control
-0.24
>More info
0.52
>More info
siliques WT control
control
silique
Original data
GEO bulk