4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on vte2-1 1d vernalization
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List of experiments correlated with "vte2-1 1d vernalization"  Help Download transcriptome of top 30
Score Experiment Correlation from
vte2-1 1d vernalization		 Correlation to
vte2-1 1d vernalization		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 vte2-1 1d vernalization 1.00 >More info 1.00 >More info WT 1d vernalization Original data GEO bulk
2 vte2-1 3d vernalization 0.83 >More info 0.56 >More info WT 3d vernalization Original data GEO bulk
3 WT H2O2 3h 0.73 >More info 0.39 >More info WT water 3h 3h_H2O2 Original data GEO bulk
4 SCR-GR Time 12H Dex 0.72 >More info 0.36 >More info SCR-GR Time 0H Dex Dex media for 12 hours Original data GEO bulk
5 WT roots - Fe 0.58 >More info 0.50 >More info WT roots + Fe Roots Original data GEO bulk
6 Col BTH 0.41 >More info 0.67 >More info Col rosettes Original data GEO bulk
7 low CO2 + light 0.48 >More info 0.56 >More info normal CO2 + light Original data GEO bulk
8 rosette leaves fdh 0.61 >More info 0.41 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
9 SHR-GR Time 1H Dex 0.53 >More info 0.48 >More info SHR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
10 GST 4 h (leaf) 0.60 >More info 0.41 >More info Mock 4 h (leaf) Original data Elicitor treatments
11 rsa3-1 Na 24h 0.63 >More info 0.36 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
12 rcf1-1 cold 24h 0.62 >More info 0.37 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
13 root stele -S -0.54 >More info -0.45 >More info root stele pH5.7 Original data GEO bulk
14 6 h SL WT -0.67 >More info -0.31 >More info 0 h WT seed Original data
15 vtc2 mature somatic embryo 0.65 >More info 0.33 >More info WT mature somatic embryo mature somatic embryo Original data GEO bulk
16 6 h SL Attim 17-1 1 -0.66 >More info -0.32 >More info 0 h Attim 17-1 1 seed Original data
17 Laer pretreat GA Flg22 1h 0.26 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
18 Leafminer damaged seedlings 0.39 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
19 gun1gun5 far-red pretreated -0.58 >More info -0.37 >More info WT far-red pretreated Original data GEO bulk
20 Lipopolysaccaride4 h (leaf) 0.57 >More info 0.38 >More info Mock 4 h (leaf) Original data Elicitor treatments
21 Heat shock optimum 0.30 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
22 seedling h S Exp -0.43 >More info -0.52 >More info seedling -S Exp seedling Original data
23 anac017-1 H2O2 3h -0.63 >More info -0.31 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
24 DUO1 induced 6h -0.60 >More info -0.34 >More info 6hr-not-induced whole plant Original data GEO bulk
25 cat2-2; 8h switch to ambient CO2 concentrations; 0.40 >More info 0.53 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
26 GO5; 0h switch to ambient CO2 concentrations; -0.57 >More info -0.36 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
27 agb1 -ABA LF 0.69 >More info 0.24 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
28 48 h S WT -0.63 >More info -0.30 >More info 0 h WT seed Original data
29 siliques AtHb1 control 0.41 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
30 flu 0.52 >More info 0.38 >More info WT Col Original data GEO bulk
31 +1.6 mM Tween 20 1 h. 0.51 >More info 0.39 >More info +distilled water 1 h. Original data GEO bulk
32 48 h S Attim 17-1 1 -0.61 >More info -0.28 >More info 0 h Attim 17-1 1 seed Original data
33 ceh1 mutant 0.58 >More info 0.31 >More info Parent line Original data
34 Drought Stress 24 h (shoot) 0.53 >More info 0.34 >More info Stress mock 24 h (shoot) Original data Stress treatments
35 arr10 arr12 -0.57 >More info -0.30 >More info DMSO--WT DMSO roots Original data GEO bulk
36 21h-DC3000 hrpA -0.30 >More info -0.56 >More info 21h-DC3000 leaves Original data GEO bulk
37 cat2-short-day 2d 0.31 >More info 0.54 >More info Col0-SD2 transferred to air (400 ppm) for 2 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
38 Col0-PsmES4326-24hpi 0.24 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
39 Chemically -0.21 >More info -0.64 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
40 cpr5npr1svi1 0.64 >More info 0.20 >More info WT(COL) Original data GEO bulk
41 HopZ1a treated 0.55 >More info 0.29 >More info col Original data GEO bulk
42 CT101 ozone 0.59 >More info 0.25 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
43 pepr1-1 Pepr2-3 +Pep2 10h -0.66 >More info -0.17 >More info WT +Pep2 10h Pep2 Original data GEO bulk
44 gpa1-4/agb1-2 ozone 2d -0.54 >More info -0.29 >More info Col ozone 2d ozone Original data GEO bulk
45 dde2-2 9 hpi A. brassicicola 0.59 >More info 0.24 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
46 afb3-1 2h KNO3 0.50 >More info 0.32 >More info Ws 2h KNO3 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
47 root endodermis -S -0.65 >More info -0.17 >More info root endodermis and quiescent center pH5.7 Original data GEO bulk
48 low CO2 + dark 0.52 >More info 0.30 >More info normal CO2 + light Original data GEO bulk
49 Shoot -Cs 0.27 >More info 0.54 >More info Control-shoot Original data GEO bulk
50 HopZ1a treated ulp1c ulp1d 0.52 >More info 0.28 >More info col Original data GEO bulk
51 WT AntimycinA 3h 0.52 >More info 0.28 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
52 ANOXIA -0.50 >More info -0.30 >More info ANOXIA+SUCROSE Original data GEO bulk
53 6h +Pi -0.62 >More info -0.18 >More info 6h -Pi root Original data GEO bulk
54 vte2 leaves 48h LT 0.59 >More info 0.21 >More info Col leaves 48h LT 48h 9-11th adult leaves Original data
55 tfl1-1-16ºC 0.53 >More info 0.26 >More info WT-16ºC Original data GEO bulk
56 24h SL Attim 17-1 1 -0.53 >More info -0.25 >More info 0 h Attim 17-1 1 seed Original data
57 Flagellin 4 h (leaf) 0.56 >More info 0.22 >More info Mock 4 h (leaf) Original data Elicitor treatments
58 ulp1c ulp1d 0.53 >More info 0.25 >More info col Original data GEO bulk
59 rosette leaves lcr 0.50 >More info 0.28 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
60 shoots bhlh100/101 0uM Fe 0.50 >More info 0.27 >More info shoots WT 0uM Fe 0uM Fe shoots Original data GEO bulk
61 OsSAP11 expressing -0.57 >More info -0.20 >More info WT seedlings Original data GEO bulk
62 seedlings-week-old RECA1-overexpressing
transgenic		 0.53 >More info 0.24 >More info seedlings-week-old Col-0 seedlings Original data
63 coi1-16 ein2 sid2 ctrl -0.59 >More info -0.18 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
64 24h SL WT -0.50 >More info -0.25 >More info 0 h WT seed Original data
65 sni1 0.50 >More info 0.25 >More info WT Original data GEO bulk
66 root protoplasts 40 mM NaCl 0.54 >More info 0.20 >More info whole roots 40 mM NaCl protoplasting and FACS sorting Original data GEO bulk
67 Te ozone 0.57 >More info 0.17 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
68 8hr-pH4.5 0.53 >More info 0.20 >More info 8hr-pH6 8hr pH 4.5 roots Original data GEO bulk
69 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.54 >More info 0.19 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
70 rosette leaves bdg 0.50 >More info 0.23 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
71 sicy-192 gun1-101 cotyledons 0.50 >More info 0.23 >More info WT cotyledons cotyledons Original data
72 root callus inducing medium 96 h -0.56 >More info -0.16 >More info root callus inducing medium 0 h 96 hours after incubating on callus inducing medium root explants Original data GEO bulk
73 GST NPP1 4 h (leaf) 0.50 >More info 0.22 >More info Mock 4 h (leaf) Original data Elicitor treatments
74 DC3000 2 h (leaf) 0.50 >More info 0.22 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
75 rdr6-15 -0.50 >More info -0.22 >More info Col-0 Original data GEO bulk
76 8h-DC3000 avrRpm1 0.50 >More info 0.22 >More info 8h-DC3000 leaves Original data GEO bulk
77 root - 08% oxygen - 48h -0.22 >More info -0.50 >More info root - 21% oxygen - 48h Original data GEO bulk
78 2hr transitory KNO3 ECR cell -0.21 >More info -0.51 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
79 estradiole-induced ANAC059 0.16 >More info 0.55 >More info transgenic (empty vector inducible system) Original data GEO bulk
80 UV Stress 24 h (shoot) 0.53 >More info 0.18 >More info Stress mock 24 h (shoot) Original data Stress treatments
81 sps1 -0.58 >More info -0.13 >More info WT seedling Original data GEO bulk
82 edr1 36 h powdery mildew 0.53 >More info 0.17 >More info Col-0 36 h powdery mildew Original data GEO bulk
83 root stele 40 mM NaCls 0.50 >More info 0.20 >More info root stele Original data GEO bulk
84 35SAvr 0.18 >More info 0.52 >More info Ecotype Col Original data GEO bulk
85 OE WRKY40.4 -0.56 >More info -0.13 >More info OE WRKY40.4 none leaf Original data GEO bulk
86 Col-0 ozone 0.52 >More info 0.17 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
87 Heat 2 days recovery 0.53 >More info 0.16 >More info Mock 2 days recovery seedling Original data GEO bulk
88 prt6-1 -0.69 >More info -0.00 >More info Col-0 imbibed for 24 h Pre-germinated seeds Original data GEO bulk
89 efr-1 +elf18 10h -0.55 >More info -0.13 >More info WT +elf18 10h elf18 Original data GEO bulk
90 coi1-16 ein2 sid2 ozone 0.55 >More info 0.13 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
91 Inflorescences Trp1 -0.05 >More info -0.63 >More info Inflorescences ler inflorescences Original data GEO bulk
92 Red/FR Light45min 0.18 >More info 0.50 >More info FarRed Light 45min Original data Light treatments
93 dyt1 -0.50 >More info -0.16 >More info WT anther Original data GEO bulk
94 root Dosed gold 0.56 >More info 0.10 >More info root No gold .125 mM gold 24 h roots Original data
95 D2O 0.54 >More info 0.12 >More info H2O seedling Original data GEO bulk
96 0.125 mM gold 24 h 0.56 >More info 0.10 >More info root 0.125 mM gold 24 h roots Original data GEO bulk
97 PNO8 3 h 0.08 >More info 0.58 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
98 ORS1 induced 0.51 >More info 0.14 >More info mock-induced rosette leaves Original data GEO bulk
99 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.52 >More info 0.13 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
100 edr1 18 h powdery mildew 0.55 >More info 0.10 >More info Col-0 18 h powdery mildew Original data GEO bulk
101 cpr5scv1 0.54 >More info 0.10 >More info WT(COL) Original data GEO bulk
102 C24 ozone 0.54 >More info 0.10 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
103 9 hr Hypoxia 1 hr recovery IP RNA 0.56 >More info 0.08 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
104 IAA7mII over-expressor IAA Treated -0.05 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
105 bri1-116 -0.10 >More info 0.73 >More info Col seedling Original data GEO bulk
106 P-chlorophenoxy- isobutyric acid 3 h 0.06 >More info 0.56 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
107 9 hr Hypoxia IP RNA 0.50 >More info 0.12 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
108 12h volatiles Sp. HRO-C48 -0.55 >More info -0.06 >More info 12h untreated whole seedling Original data GEO bulk
109 AFB1 0h 0.50 >More info 0.11 >More info Col 0h Leaf Original data GEO bulk
110 pif4pif5 mut dark 0.04 >More info 0.57 >More info WT dark Original data GEO bulk
111 Full C2 T2 0.07 >More info 0.53 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
112 tZ -0.50 >More info -0.10 >More info DMSO--WT trans-zeatin roots Original data GEO bulk
113 aerial organ callus inducing medium 24h 0.52 >More info 0.07 >More info aerial organ callus inducing medium 0 h 24 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
114 Col-0 C2H4 24h 0.51 >More info 0.08 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
115 S15-118 0.52 >More info 0.06 >More info wt Original data GEO bulk
116 WT +elf18 10h 0.51 >More info 0.05 >More info WT untreated elf18 Original data GEO bulk
117 SND1 12h 0.56 >More info 0.00 >More info wt 12h Original data GEO bulk
118 shoot control p35S 0.51 >More info 0.05 >More info shoot control total Original data GEO bulk
119 mbd4 mutant thaliana 10-day-old seedling 0.56 >More info -0.01 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
120 HairpinZ 4 h (leaf) 0.57 >More info -0.03 >More info Mock 4 h (leaf) Original data Elicitor treatments
121 PIF5ox low R/FR -0.52 >More info -0.00 >More info Col-0 low R/FR low R/FR seedlings Original data GEO bulk
122 JMJ24-IBM1 double knockout -0.52 >More info -0.00 >More info WT Original data GEO bulk
123 AtGATA2ox 0.54 >More info -0.02 >More info Col seedling Original data GEO bulk
124 root cells cortex 140mM NaCl 1 hour 0.58 >More info -0.07 >More info root cells cortex standard 1 hour root cells cortex Original data
125 BLM+INA 0.51 >More info -0.00 >More info CK BLM and INA seedling Original data
126 Shoot apex inflorescence (after bolting) -0.14 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
127 aerial organ callus inducing medium 48 h 0.51 >More info -0.01 >More info aerial organ callus inducing medium 0 h 48 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
128 SCR-GR Time 3H Dex 0.73 >More info -0.23 >More info SCR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
129 seed germinating in countinuous light 24h SL -0.18 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
130 9 hr Hypoxia 1 hr recovery Total RNA 0.56 >More info -0.09 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
131 9 hr Hypoxia Total RNA 0.54 >More info -0.10 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
132 root endodermis and quiescent center 40 mM NaCl 0.55 >More info -0.14 >More info root endodermis and quiescent center Original data GEO bulk
133 2 h EST -0.10 >More info 0.51 >More info mock 2 h EST seedling Original data GEO bulk
134 root cells stele 140mM NaCl 1 hour 0.53 >More info -0.13 >More info root cells stele standard 1 hour root cells stele Original data
135 12h-DC3000 avrRpm1 0.51 >More info -0.15 >More info 12h-DC3000 leaves Original data GEO bulk
136 WT NAA 1h 0.54 >More info -0.33 >More info WT 0h Leaf tissue Original data GEO bulk
137 bbx24 in Simulated Shade -0.55 >More info 0.40 >More info WT in simulated shade shade seedling Original data
138 CCA1-ox 6am non-polysomal -0.41 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data