4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on calcicole ecotype Cal-0
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List of experiments correlated with "calcicole ecotype Cal-0"  Help Download transcriptome of top 30
Score Experiment Correlation from
calcicole ecotype Cal-0		 Correlation to
calcicole ecotype Cal-0		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 calcicole ecotype Cal-0 1.00 >More info 1.00 >More info Col-4 1 mM CaCl2 Original data GEO bulk
2 aba3-1 0.17 >More info 0.78 >More info wt Original data GEO bulk
3 camta1/3 warm 0.21 >More info 0.74 >More info WT warm entire aerial part Original data GEO bulk
4 3x(m) 0.13 >More info 0.82 >More info 2x two week old seedlings Original data
5 seedlings-week-old RECA1-overexpressing
transgenic		 0.22 >More info 0.71 >More info seedlings-week-old Col-0 seedlings Original data
6 WT 3h -P 0.18 >More info 0.73 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
7 sid2-1 cold -0.15 >More info -0.73 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
8 Col BTH 0.20 >More info 0.67 >More info Col rosettes Original data GEO bulk
9 camta3-1 0.22 >More info 0.65 >More info WT Original data GEO bulk
10 UV Stress 24 h (shoot) 0.20 >More info 0.66 >More info Stress mock 24 h (shoot) Original data Stress treatments
11 npr1 sni1 brca2a SA -0.17 >More info -0.68 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
12 E.orontii Infection 3 day 0.15 >More info 0.69 >More info Uninfection 3 day Original data Elicitor treatments
13 Col whole leaf 7dpi 0.22 >More info 0.62 >More info Col whole leaf 7d UI whole leaf Original data GEO bulk
14 Col ozone 3h 0.20 >More info 0.63 >More info Col clean-air 3h ozone Original data GEO bulk
15 sfr3 cold 0.14 >More info 0.69 >More info WT cold All aerial tissue Original data GEO bulk
16 CLO 4mM 0.18 >More info 0.64 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
17 Laer pretreat GA Flg22 1h 0.11 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
18 GA 0.15 >More info 0.66 >More info none GA Rosette Original data GEO bulk
19 seed germinating in countinuous light 24h SL 0.14 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
20 bio4-1 mutant leaves 0.20 >More info 0.60 >More info WT leaves leaves Original data GEO bulk
21 camta3-2 0.21 >More info 0.59 >More info WT Original data GEO bulk
22 cpr5scv1 0.17 >More info 0.62 >More info WT(COL) Original data GEO bulk
23 edr1 18 h powdery mildew 0.21 >More info 0.58 >More info Col-0 18 h powdery mildew Original data GEO bulk
24 Octopus overexpressor 35SDYG25 0.13 >More info 0.65 >More info WS Original data GEO bulk
25 npr1 sni1 SA 0.20 >More info 0.58 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
26 WT roots - Fe 0.01 >More info 0.77 >More info WT roots + Fe Roots Original data GEO bulk
27 Elevated CO2 AMPLE N NIGHT 0.11 >More info 0.67 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
28 Homozygous-AtcesA6 -0.21 >More info -0.57 >More info Heterozygous-AtcesA6 rosette Original data GEO bulk
29 GST 4 h (leaf) 0.19 >More info 0.58 >More info Mock 4 h (leaf) Original data Elicitor treatments
30 Col whole leaf 5dpi 0.17 >More info 0.60 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
31 M6PR transgenic leaf 0mM NaCl 0.16 >More info 0.61 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
32 4C 1h 0.10 >More info 0.67 >More info 4C 0h Original data GEO bulk
33 4C 2h(SOIL) 0.10 >More info 0.67 >More info 4C 0h(SOIL) Original data GEO bulk
34 phyB mutant 22C 10hrs -0.11 >More info -0.65 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
35 gpa1 -ABA GC -0.13 >More info -0.63 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
36 cpr5 0.16 >More info 0.60 >More info WT(COL) Original data GEO bulk
37 MYB12OX 0.21 >More info 0.55 >More info Col-0 aerial part Original data
38 vtc2 (I) 0.22 >More info 0.53 >More info Col (I) rosette Original data GEO bulk
39 CAX1/CAX3 mutant 0.17 >More info 0.58 >More info Col whole plant Original data GEO bulk
40 anti-sense for AtAOX1a 0.19 >More info 0.56 >More info WT Original data GEO bulk
41 edr1 36 h powdery mildew 0.22 >More info 0.53 >More info Col-0 36 h powdery mildew Original data GEO bulk
42 CMV-WT 0.18 >More info 0.57 >More info Mock-At Aerial tissues Original data GEO bulk
43 BLM+INA 0.17 >More info 0.58 >More info CK BLM and INA seedling Original data
44 Shoot apex inflorescence (after bolting) 0.09 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
45 Mutant siz1-3 (Drought) 0.15 >More info 0.59 >More info Col-0 (Drought) Original data GEO bulk
46 mkk1/mkk2 control rep 0.19 >More info 0.55 >More info Col-0 Time 0 rep Original data GEO bulk
47 Laer pretreat JA Flg22 0h -0.09 >More info -0.65 >More info Laer pretreat water control leaf discs Original data GEO bulk
48 Homozygous-AtcesA4 -0.17 >More info -0.57 >More info Heterozygous-AtcesA4 rosette Original data GEO bulk
49 coi1-2 0.13 >More info 0.61 >More info Col-0 mock Whole seedling Original data GEO bulk
50 camta2/3 warm 0.16 >More info 0.58 >More info WT warm entire aerial part Original data GEO bulk
51 OE WRKY63.3 high light 0.16 >More info 0.58 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
52 siz1-3 drought 0.15 >More info 0.59 >More info Col-0 drought Original data GEO bulk
53 S15-118 0.14 >More info 0.60 >More info wt Original data GEO bulk
54 shl-2 Pool 0.17 >More info 0.57 >More info Ler Pool seedling Original data GEO bulk
55 IAA7mII over-expressor IAA Treated 0.04 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
56 Col-0 INA 48h 0.16 >More info 0.57 >More info Col-0 MOCK 48h Original data GEO bulk
57 60m light -0.07 >More info -0.66 >More info before light whole seedlings Original data GEO bulk
58 smg7b-1 0.14 >More info 0.59 >More info WT whole plant Original data GEO bulk
59 OE WRKY63.3 0.21 >More info 0.52 >More info OE WRKY40.4 none leaf Original data GEO bulk
60 WT 2-4h Xanthomonas 0.13 >More info 0.60 >More info WT T0 Original data GEO bulk
61 Col-0 DCA 48h 0.17 >More info 0.55 >More info Col-0 MOCK 48h Original data GEO bulk
62 Col(gl) leaf 0mM NaCl 0.17 >More info 0.55 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
63 Col(gl) 0mM NaCl 0.17 >More info 0.55 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
64 Col0-PsmES4326-24hpi 0.11 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
65 1 h Light Total RNA -0.09 >More info -0.63 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
66 cpr5 0.15 >More info 0.57 >More info WT seedling Original data GEO bulk
67 NahG -0.09 >More info -0.63 >More info Col-0 Leaves Original data GEO bulk
68 S58-2 0.19 >More info 0.53 >More info wt Original data GEO bulk
69 Elevated CO2 AMPLE N DAY 0.06 >More info 0.66 >More info Ambient CO2 AMPLE N DAY Youngest Most Fully Expanded Leaf Original data
70 eds16 whole leaf 7dpi -0.15 >More info -0.56 >More info Col whole leaf 7dpi whole leaf Original data GEO bulk
71 camta1/2/3 warm 0.16 >More info 0.55 >More info WT warm entire aerial part Original data GEO bulk
72 eds16 whole leaf 5dpi -0.11 >More info -0.60 >More info Col whole leaf 5dpi whole leaf Original data GEO bulk
73 eds16 whole leaf 0h UI -0.09 >More info -0.62 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
74 Col-0 INA 6d 0.12 >More info 0.59 >More info Col-0 MOCK 6d Original data GEO bulk
75 sni1 0.07 >More info 0.64 >More info WT Original data GEO bulk
76 Mutant siz1-3 0.16 >More info 0.54 >More info Col-0 Original data GEO bulk
77 ice1 control 0.15 >More info 0.55 >More info WT control Original data GEO bulk
78 1 h Light IP RNA -0.16 >More info -0.54 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
79 siz1-3 control 0.16 >More info 0.54 >More info Col-0 control Original data GEO bulk
80 Cor hrpS 10h 0.19 >More info 0.51 >More info Mock 10h Cor hrpS Original data GEO bulk
81 cpr5npr1svi1 0.13 >More info 0.57 >More info WT(COL) Original data GEO bulk
82 A. thaliana-A. lyrata hybrid -0.08 >More info -0.62 >More info A. thaliana mature leaves before flowering Original data GEO bulk
83 cpr5npr1 0.14 >More info 0.55 >More info WT(COL) Original data GEO bulk
84 35S:RPS4 eds1-2 24h -0.17 >More info -0.52 >More info 35S:RPS4 24h leaves Original data
85 Mutant NahG(leaf) -0.10 >More info -0.59 >More info Col-0 (leaf) Original data GEO bulk
86 PstDC3000 48h 0.10 >More info 0.59 >More info WT untreated 48hr leaf Original data GEO bulk
87 bri1-116 -0.04 >More info 0.73 >More info Col seedling Original data GEO bulk
88 bHLH122 ox -0.10 >More info -0.59 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
89 pmr5 0.11 >More info 0.58 >More info Col-0 Original data GEO bulk
90 irradiated leaf (cmt 5d) 0.12 >More info 0.56 >More info control leaf (cmt 5d) rosette leaf only Original data GEO bulk
91 Cs shoot -0.01 >More info -0.67 >More info control shoot Original data GEO bulk
92 pmr5 pmr6 0.12 >More info 0.56 >More info Col-0 Original data GEO bulk
93 eds16 whole leaf 3dpi -0.10 >More info -0.58 >More info Col whole leaf 3dpi whole leaf Original data GEO bulk
94 WT powdery mildew 0.11 >More info 0.57 >More info WT control inoculation with the powdery mildew pathogen Original data GEO bulk
95 30m light -0.03 >More info -0.64 >More info before light whole seedlings Original data GEO bulk
96 anac017-2 AntimycinA 3h -0.15 >More info -0.52 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
97 INA 0.15 >More info 0.52 >More info CK INA seedling Original data
98 35S:RPS4 eds1-2 2h -0.07 >More info -0.60 >More info 35S:RPS4 2h leaves Original data
99 cs26 short-day -0.12 >More info -0.54 >More info Leaves-WT-SD leaf Original data GEO bulk
100 rsa3-1 Na 24h 0.14 >More info 0.52 >More info WT Na 24h 120 mM NaCl for 24 h whole seedlings Original data GEO bulk
101 opr3 OPDA 0.5 h 0.10 >More info 0.56 >More info opr3 0 h Original data GEO bulk
102 shoot-10 μM DEX- 6 hr 0.15 >More info 0.51 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
103 oas-a1.1 Cd 18h 0.08 >More info 0.58 >More info Cd 18h root Root Original data GEO bulk
104 Col-0 (t-zeatin 3 h) -0.11 >More info -0.54 >More info Col-0 Original data Cytokinin treatment of seedlings
105 sid2 -0.14 >More info -0.51 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
106 Heat shock optimum -0.00 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
107 pepr1-1 Pepr2-3 +Pep2 2h -0.14 >More info -0.51 >More info WT +Pep2 2h Pep2 Original data GEO bulk
108 camta1/2/3 24h cold 0.13 >More info 0.52 >More info WT 24h cold 24h cold entire aerial part Original data GEO bulk
109 bZIP1ko mutant N+Light- 0.07 >More info 0.58 >More info WT-sib N+Light- whole plant Original data GEO bulk
110 bio4-1 mutant watered00µM biotin leaves -0.08 >More info -0.57 >More info bio4-1 mutant leaves leaves Original data GEO bulk
111 ataf1-1 mutant Col-0 Bgh inoculated 0.14 >More info 0.50 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
112 WT-SA 0.13 >More info 0.51 >More info WT-mock spray 1 mM SA for 6 hrs (spray) mature leaf Original data GEO bulk
113 gh3.5D uninoculated -0.12 >More info -0.52 >More info Col-0 48 hpi Original data GEO bulk
114 Leafminer damaged seedlings 0.08 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
115 shoot-10 μM DEX- 24hr 0.12 >More info 0.52 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
116 pip3 At2g19270 TDNA 9 0.11 >More info 0.52 >More info Col-0 whole plant Original data GEO bulk
117 downy mildew cotyledons late stage 0.09 >More info 0.54 >More info mock inoculated Cotyledons Original data GEO bulk
118 ceh1 mutant 0.12 >More info 0.51 >More info Parent line Original data
119 leaf blade in D 0.10 >More info 0.52 >More info leaf blade in WL leaf blades Original data GEO bulk
120 cs26 long day 0.08 >More info 0.54 >More info Leaves-WT-LD leaf Original data GEO bulk
121 coi1-2 JA 0.12 >More info 0.50 >More info JA Whole seedling Original data GEO bulk
122 OH1 0.12 >More info 0.50 >More info Col-0 leaves Original data GEO bulk
123 WT+chitooctaose 0.05 >More info 0.57 >More info WT+water chitooctaose seedlings Original data GEO bulk
124 35S:RPS4 eds1-2 8h -0.09 >More info -0.53 >More info 35S:RPS4 8h leaves Original data
125 FLIGHT TAGESB plate6 ROOTS 0.07 >More info 0.54 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
126 amiRAP aerobic -0.08 >More info -0.53 >More info WT aerobic aerobic Original data GEO bulk
127 WT+sucrose -0.09 >More info -0.52 >More info WT+no sugars rosette leaves Original data GEO bulk
128 SA 3h 0.05 >More info 0.55 >More info EtOH 3h 3hr Original data GEO bulk
129 sfr6 drought -0.07 >More info -0.53 >More info WT drought All aerial tissue Original data GEO bulk
130 del1-1 mutant 5d uninfected 0.06 >More info 0.54 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
131 CeO2 germinant -0.05 >More info -0.55 >More info Millipore Water germinant CeO2 seedling Original data
132 seedlings protease IV 0.09 >More info 0.51 >More info seedlings nontreated control whole seedling Original data
133 P.syringae AvrRpt2 4 h (leaf) 0.05 >More info 0.54 >More info Mock 4 h (leaf) Original data Elicitor treatments
134 Light 3day wt -0.07 >More info -0.52 >More info 0h wt Original data
135 Total RNA 35S:HF-RPL18 0.06 >More info 0.53 >More info Total RNA csp1 12h non-stress rosettes Original data GEO bulk
136 E.orontii Infection 6 h 0.06 >More info 0.52 >More info Uninfection 6 h Original data Elicitor treatments
137 bak1-3 +Pep2 10h 0.07 >More info 0.51 >More info WT +Pep2 10h Pep2 Original data GEO bulk
138 Leaf wounded 0.01 >More info 0.57 >More info Leaf control vegetative leaf Original data GEO bulk
139 -Sulfate 24 h 0.01 >More info 0.56 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
140 Selenate (root) 0.04 >More info 0.53 >More info Ws (root) Original data GEO bulk
141 Root Selenate 0.04 >More info 0.53 >More info Root control 40 micromolar selenate Root Original data GEO bulk
142 bam7 untreated -0.03 >More info -0.54 >More info WT untreated none shoot Original data
143 miR393 0h 0.05 >More info -0.62 >More info WT 0h Leaf tissue Original data GEO bulk
144 Dry pre-dawn -0.06 >More info -0.50 >More info Wet pre-dawn water-limited whole rosette Original data GEO bulk
145 Got7 UV 0.05 >More info 0.50 >More info Got7 mock UV seedling Original data
146 flu dark 8hours/30 minute light -0.01 >More info 0.56 >More info col dark 8hours/30 minute light Original data GEO bulk
147 seedling -S Exp -0.03 >More info 0.58 >More info seedling FN Exp seedling Original data
148 Col ozone 2d 0.01 >More info 0.52 >More info Col clean-air 2d ozone Original data GEO bulk
149 bak1-3 +Pep2 2h 0.03 >More info 0.50 >More info WT +Pep2 2h Pep2 Original data GEO bulk
150 B.cinerea 18 h infection -0.03 >More info 0.55 >More info Mock 18 h Original data Botrytis cinerea infection
151 Col whole leaf 1dpi -0.01 >More info -0.51 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
152 Botrytis cinerea 18h -0.03 >More info 0.55 >More info control 18h Original data GEO bulk
153 CCA1-ox 6am non-polysomal -0.00 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
154 Infected pft1 leaf -0.05 >More info 0.53 >More info Infected Col-0 leaf F. oxysporum leaf Original data GEO bulk
155 Polysomal RNA 35S:AtCSP1-FH1 cold 0.04 >More info -0.52 >More info Polysomal RNA csp1 cold 12h cold (4C) rosettes Original data GEO bulk
156 siliques AtHb1 control -0.12 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
157 rdr6-15 0.13 >More info -0.51 >More info Col-0 plant inflorescence Original data