4.0:Analysis result - correlation network
Home
Method
Manual
History
Module-based correlation network(MCN) centered on scl3
> How to read results
Simple
All
>>Show Interactive view (test)
List of experiments correlated with "scl3"
Download transcriptome of top 30
Score
Experiment
Correlation from
scl3
Correlation to
scl3
Control Experiment
Genotype
Treatment
Tissue
Link to
original data
Experimental
Category
Data set
Details
1
scl3
1.00
>More info
1.00
>More info
Col-0
whole root
Original data
GEO bulk
2
lht1 PstDC3000 48h
0.45
>More info
0.56
>More info
PstDC3000 48h
48hr
leaf
Original data
GEO bulk
3
pepr1-1 Pepr2-3 untreated
0.25
>More info
0.76
>More info
WT untreated
untreated
Original data
GEO bulk
4
Col-0 overexpressing At1g54160 control
0.55
>More info
0.45
>More info
WT no treatement
Original data
GEO bulk
5
At1g54160 ox
0.55
>More info
0.45
>More info
Col-0
Original data
GEO bulk
6
WT roots - Fe
0.29
>More info
0.71
>More info
WT roots + Fe
Roots
Original data
GEO bulk
7
root - 04% oxygen - 48h
0.35
>More info
0.64
>More info
root - 21% oxygen - 48h
Original data
GEO bulk
8
seedlings by volatiles from leafminer damaged
Lima bean 48h
0.40
>More info
0.58
>More info
seedlings by volatiles from healthy Lima bean 48h
leaves
Original data
GEO bulk
9
B.cinerea 18 h infection
0.19
>More info
0.75
>More info
Mock 18 h
Original data
Botrytis cinerea
infection
10
root - 01% oxygen - 48h
0.32
>More info
0.62
>More info
root - 21% oxygen - 48h
Original data
GEO bulk
11
PAHs stress
0.35
>More info
0.59
>More info
exp control
phenanthrene
whole plants
Original data
GEO bulk
12
Botrytis cinerea 18h
0.19
>More info
0.75
>More info
control 18h
Original data
GEO bulk
13
bak1-3 untreated
0.25
>More info
0.68
>More info
WT untreated
untreated
Original data
GEO bulk
14
35S::PI ap3-3 35S::AP-GR +DEX
0.28
>More info
0.64
>More info
0hr DEX
Original data
GEO bulk
15
lht1 untreated
0.36
>More info
0.55
>More info
WT untreated
untreated
leaf
Original data
GEO bulk
16
Mutant iaa5_6_19
0.31
>More info
0.60
>More info
Col
Original data
GEO bulk
17
Laer pretreat GA Flg22 1h
0.18
>More info
0.71
>More info
Laer pretreat water control
leaf discs
Original data
GEO bulk
18
Aerobic e1 ate2
0.32
>More info
0.55
>More info
Aerobic Col-0
aerobic (normal) conditions
seedlings
Original data
GEO bulk
19
apk1 apk2
0.35
>More info
0.52
>More info
Col0-control
whole rosette
Original data
GEO bulk
20
Mutant siz1-3
0.32
>More info
0.54
>More info
Col-0
Original data
GEO bulk
21
siz1-3 control
0.32
>More info
0.54
>More info
Col-0 control
Original data
GEO bulk
22
3x(m)
-0.22
>More info
-0.64
>More info
2x
two week old seedlings
Original data
23
P-chlorophenoxy- isobutyric acid 3 h
0.30
>More info
0.53
>More info
Mock 3 h
Original data
Effect of auxin inhibitors on seedlings
24
WT Shoot Hypoxia
0.16
>More info
0.67
>More info
WT Shoot Normoxia (mock)
Hypoxia
Shoot
Original data
GEO bulk
25
shoot hypoxia total
0.26
>More info
0.57
>More info
shoot control total
Original data
GEO bulk
26
Heat shock optimum
0.17
>More info
0.65
>More info
Heat shock baseline
Photosynthesis at optimum temperature
leaf first fully expanded
Original data
GEO bulk
27
Aerobic prt6
0.20
>More info
0.62
>More info
Aerobic Col-0
aerobic (normal) conditions
seedlings
Original data
GEO bulk
28
Col BTH
0.15
>More info
0.67
>More info
Col
rosettes
Original data
GEO bulk
29
bZIP1ko mutant N+Light-
0.22
>More info
0.60
>More info
WT-sib N+Light-
whole plant
Original data
GEO bulk
30
npr1-3 DCA 48h
0.25
>More info
0.56
>More info
npr1-3 MOCK 48h
Original data
GEO bulk
31
seedling 24h after Gamma atm-1
0.26
>More info
0.55
>More info
seedling day 2 unirradiated atm-1
24h
Original data
32
long 17-degree-
0.06
>More info
0.74
>More info
control long
Original data
GEO bulk
33
Col0-PsmES4326-24hpi
0.19
>More info
0.61
>More info
Col0-mock-24hpi
leaf
Original data
GEO bulk
34
MPK6 ox Shoot Hypoxia
0.25
>More info
0.55
>More info
WT Shoot Normoxia (mock)
Hypoxia
Shoot
Original data
GEO bulk
35
Elevated CO2 AMPLE N NIGHT
0.22
>More info
0.58
>More info
Ambient CO2 AMPLE N NIGHT
Youngest Most Fully Expanded Leaf
Original data
36
WT powdery mildew
0.23
>More info
0.56
>More info
WT control
inoculation with the powdery mildew pathogen
Original data
GEO bulk
37
Imidazolinone EC50
0.28
>More info
0.51
>More info
Carrier (Imidazolinone)
Original data
GEO bulk
38
Whole root - S 3H
0.15
>More info
0.62
>More info
Whole root - S 0H
Original data
GEO bulk
39
aba3-1
0.23
>More info
0.54
>More info
wt
Original data
GEO bulk
40
Shoot -Cs
0.17
>More info
0.59
>More info
Control-shoot
Original data
GEO bulk
41
del1-1 5dpi
0.05
>More info
0.70
>More info
Col-0 5dpi
mature fully expanded leaves
Original data
GEO bulk
42
det2 light-dark
-0.16
>More info
-0.58
>More info
det2 light
light-dark
Original data
GEO bulk
43
elf3-7-16ºC
0.21
>More info
0.53
>More info
WT-16ºC
Original data
GEO bulk
44
del1-1 mutant 5d uninfected
0.18
>More info
0.54
>More info
Col-0 5d uininfected
mature fully expanded leaves
Original data
GEO bulk
45
COL-0-Fe--shoot
0.22
>More info
0.50
>More info
COL-0-Ctrl--shoot
shoot
Original data
46
root - 04% oxygen - 2h
-0.08
>More info
0.78
>More info
root - 21% oxygen - 2h
Original data
GEO bulk
47
Leafminer damaged seedlings
0.14
>More info
0.56
>More info
Healthy seedlings
leaves
Original data
GEO bulk
48
cop1 Seedling BL
0.19
>More info
0.51
>More info
WT Seedling BL
Original data
GEO bulk
49
csn5 (csn5a-2 csn5b) light
0.19
>More info
0.50
>More info
WT light
Original data
GEO bulk
50
Col-0 V. longisporum-inoculated 48 hpi
0.11
>More info
0.58
>More info
Col-0 mock 48 hpi
Pool of >50 individual roots
Original data
51
Red/FR Light45min
0.03
>More info
0.65
>More info
FarRed Light 45min
Original data
Light treatments
52
gun1gun5 far-red pretreated
-0.11
>More info
-0.57
>More info
WT far-red pretreated
Original data
GEO bulk
53
JA 3h
0.07
>More info
0.60
>More info
EtOH 3h
3hr
Original data
GEO bulk
54
long 12-degree-
0.13
>More info
0.53
>More info
control long
Original data
GEO bulk
55
ptpks2
0.14
>More info
0.52
>More info
Col-WT
leaves
Original data
GEO bulk
56
seed germinating in countinuous light 24h SL
-0.01
>More info
0.67
>More info
Control for tissue data
seed
Original data
GEO bulk
57
CDB1-Knockout
0.14
>More info
0.51
>More info
WT
Original data
GEO bulk
58
chl1-5 Nitrate 0.5h
0.03
>More info
0.62
>More info
WT Nitrate 0.5h
Original data
GEO bulk
59
Methyl Jasmonate 0.5 h
0.11
>More info
0.53
>More info
Mock 0.5 h
Original data
Basic hormone treatment of seedlings
60
downy mildew cotyledons late stage
0.12
>More info
0.52
>More info
mock inoculated
Cotyledons
Original data
GEO bulk
61
essp4/sdg8-5 mutant
0.14
>More info
0.50
>More info
wild type
leaf
Original data
GEO bulk
62
4C 1h
-0.13
>More info
-0.50
>More info
4C 0h
Original data
GEO bulk
63
Botrytis cinerea 48h
0.13
>More info
0.50
>More info
control 48h
Original data
GEO bulk
64
tetraploid
-0.08
>More info
-0.54
>More info
diploid
Original data
GEO bulk
65
Pst-DC3000(hrpA)-4hpi
-0.11
>More info
-0.51
>More info
Pst-DC3000-4hpi
Original data
GEO bulk
66
Glyphosate EC50
0.10
>More info
0.52
>More info
Carrier (Glyphosate)
Original data
GEO bulk
67
IAA7mII over-expressor IAA Treated
-0.08
>More info
0.69
>More info
empty vector IAA Treated
Original data
GEO bulk
68
NJ15
0.10
>More info
0.50
>More info
mock
sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates
Seedlings
Original data
69
dense canopy
0.06
>More info
0.53
>More info
single (control)
petiole
Original data
GEO bulk
70
ahg1-1
-0.03
>More info
-0.56
>More info
ABA control
Original data
GEO bulk
71
bri1-116
-0.14
>More info
0.73
>More info
Col
seedling
Original data
GEO bulk
72
ceh1 mutant
0.08
>More info
0.51
>More info
Parent line
Original data
73
Shoot apex inflorescence (after bolting)
-0.07
>More info
0.65
>More info
Control for tissue data
Original data
Developmental series; organs / tissues at different ages
74
Stem tissue 5 days NAA
0.07
>More info
0.50
>More info
Stem tissue T0
Stem tissue with NAA treatment
Stem tissue with NAA treatment
Original data
GEO bulk
75
atmyc2 cop1 Seedling BL
0.01
>More info
0.56
>More info
WT Seedling BL
Original data
GEO bulk
76
PNO8 3 h
0.01
>More info
0.55
>More info
Mock 3 h
Original data
Effect of other inhibitors on seedlings
77
9m.KNO3
0.02
>More info
0.50
>More info
To.
KNO3
14 day old Roots
Original data
GEO bulk
78
rsa3-1 Na 24h
-0.09
>More info
0.60
>More info
WT Na 24h
120 mM NaCl for 24 h
whole seedlings
Original data
GEO bulk
79
vte2-1 3d vernalization
-0.06
>More info
0.57
>More info
WT 3d vernalization
Original data
GEO bulk
80
Col-0 DCA 48h
-0.02
>More info
0.52
>More info
Col-0 MOCK 48h
Original data
GEO bulk
81
smg7b-1
-0.01
>More info
0.51
>More info
WT
whole plant
Original data
GEO bulk
82
tmm1-inflorescence-tips
-0.02
>More info
0.51
>More info
Col gl1-inflorescence-tips
inflorescence tip
Original data
GEO bulk
83
root - 08% oxygen - 2h
-0.08
>More info
0.56
>More info
root - 21% oxygen - 2h
Original data
GEO bulk
84
Selenate (shoot)
-0.08
>More info
0.55
>More info
Ws (shoot)
Original data
GEO bulk
85
Shoot Selenate
-0.08
>More info
0.55
>More info
Shoot control
40 micromolar selenate
Shoot
Original data
GEO bulk
86
erf104-ko H2O 4h
-0.04
>More info
0.50
>More info
Col-0 H2O 4h
Original data
GEO bulk
87
SA 4mM
-0.06
>More info
0.52
>More info
untreated
4 weeks old at time of treatment
whole leaf
Original data
GEO bulk
88
root - 08% oxygen - 30min
-0.12
>More info
0.58
>More info
root - 21% oxygen - 30min
Original data
GEO bulk
89
seedling 24h after Gamma WT
-0.10
>More info
0.55
>More info
seedling day 2 unirradiated WT
24h
Original data
90
hsfa1 quadruple mutant
0.06
>More info
-0.51
>More info
WT (Col-0)
whole seedling
Original data
GEO bulk
91
CCA1-ox 6am non-polysomal
-0.11
>More info
0.51
>More info
WT 6am non-polysomal
aerial part
Original data
92
ex1 flu dark 8hours/30 minute light
0.12
>More info
-0.51
>More info
col dark 8hours/30 minute light
Original data
GEO bulk
93
cop1 Seedling BL+ABA
-0.11
>More info
0.50
>More info
WT Seedling BL+ABA
Original data
GEO bulk
94
root - 01% oxygen - 30min
-0.21
>More info
0.54
>More info
root - 21% oxygen - 30min
Original data
GEO bulk
95
root - 04% oxygen - 30min
-0.23
>More info
0.54
>More info
root - 21% oxygen - 30min
Original data
GEO bulk
96
siliques AtHb1 control
-0.27
>More info
0.52
>More info
siliques WT control
control
silique
Original data
GEO bulk