4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on embryo proper
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List of experiments correlated with "embryo proper"  Help Download transcriptome of top 30
Score Experiment Correlation from
embryo proper		 Correlation to
embryo proper		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 embryo proper 1.00 >More info 1.00 >More info Control for tissue data Original data GEO bulk
2 whole seeds 0.93 >More info 0.93 >More info Control for tissue data Original data GEO bulk
3 embryo proper mature green 0.92 >More info 0.90 >More info Control for tissue data embryo proper captured by LCM Original data GEO bulk
4 whole seeds mature green 0.91 >More info 0.91 >More info Control for tissue data whole seeds captured by LCM Original data GEO bulk
5 embryo proper heart stage 0.90 >More info 0.92 >More info Control for tissue data embryo proper captured by LCM Original data GEO bulk
6 micropylar endosperm heart stage 0.90 >More info 0.91 >More info Control for tissue data micropylar endosperm captured by LCM Original data GEO bulk
7 peripheral endosperm heart stage 0.90 >More info 0.91 >More info Control for tissue data peripheral endosperm captured by LCM Original data GEO bulk
8 peripherial endosperm 0.91 >More info 0.90 >More info Control for tissue data Original data GEO bulk
9 peripheral endosperm mature green 0.90 >More info 0.89 >More info Control for tissue data peripherial endosperm captured by LCM Original data GEO bulk
10 micropylar endosperm mature green 0.89 >More info 0.89 >More info Control for tissue data micropylar endosperm captured by LCM Original data GEO bulk
11 Ambient CO2 leaf primordia 0.89 >More info 0.88 >More info Control for tissue data leaf primordia Original data
12 chalazal endosperm mature green 0.88 >More info 0.88 >More info Control for tissue data chalazal endosperm captured by LCM Original data GEO bulk
13 whole seeds heart stage 0.87 >More info 0.89 >More info Control for tissue data whole seeds captured by LCM Original data GEO bulk
14 Shoot apex transition (before bolting) 0.88 >More info 0.87 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
15 seed germinating in countinuous light 12 h SL 0.88 >More info 0.87 >More info Control for tissue data seed Original data GEO bulk
16 Shoot apex vegetative &Young leaves 0.87 >More info 0.87 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
17 chalazal endosperm 0.87 >More info 0.87 >More info Control for tissue data Original data GEO bulk
18 seed germinating in countinuous light 48 h SL 0.87 >More info 0.87 >More info Control for tissue data seed Original data GEO bulk
19 lec1-1 Mature Green Seed 0.87 >More info 0.87 >More info Control for tissue data Original data GEO bulk
20 lec1-1 Post-Mature Green Seed 0.87 >More info 0.87 >More info Control for tissue data Original data GEO bulk
21 Root from tip to 130 mm proximal to tip (cut
8dpg)		 0.86 >More info 0.88 >More info Control for tissue data Original data GEO bulk
22 Shoot apex vegetative 0.87 >More info 0.87 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
23 seed germinating in countinuous light 6 h SL 0.87 >More info 0.86 >More info Control for tissue data seed Original data GEO bulk
24 Rosette leaf No12 0.87 >More info 0.86 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
25 Regenerating Stump Root Tip Cut 130 mm andn Recut
0 hrs Taking 70 mm of Stump (8 dpg)		 0.86 >More info 0.87 >More info Control for tissue data Original data GEO bulk
26 Regenerating Stump Root Tip Cut 130 mm andn Recut
22 hrs Taking 70 mm of Stump (4dpg)		 0.86 >More info 0.87 >More info Control for tissue data Original data GEO bulk
27 seed coat heart stage 0.86 >More info 0.87 >More info Control for tissue data seed coat captured by LCM Original data GEO bulk
28 Flower (stage12) 0.87 >More info 0.86 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
29 Ambient CO2 expanding leaf 0.87 >More info 0.86 >More info Control for tissue data expanding leaf Original data
30 seed coat 0.87 >More info 0.86 >More info Control for tissue data Original data GEO bulk
31 Regenerating Stump Root Tip Cut 130 mm andn Recut
13 hrs Taking 70 mm of Stump (4dpg)		 0.86 >More info 0.86 >More info Control for tissue data Original data GEO bulk
32 lec1-1 24h post-fertilization Seed 0.86 >More info 0.86 >More info Control for tissue data Original data GEO bulk
33 seed germinating in countinuous light 1 h SL 0.86 >More info 0.86 >More info Control for tissue data seed Original data GEO bulk
34 Bud 0.86 >More info 0.86 >More info Control for tissue data pollen grains and tubes Original data
35 Inflorescences ler 0.86 >More info 0.86 >More info Control for tissue data inflorescences Original data GEO bulk
36 Carpels stage15 0.86 >More info 0.86 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
37 KAN1 0.86 >More info 0.86 >More info Control for tissue data shoot apical meristem Original data GEO bulk
38 LAS 0.86 >More info 0.86 >More info Control for tissue data shoot apical meristem Original data GEO bulk
39 Regenerating Stump Root Tip Cut 130 mm andn Recut
0 hrs Taking 70 mm of Stump (4dpg)		 0.85 >More info 0.87 >More info Control for tissue data Original data GEO bulk
40 Root from tip to 130 mm proximal to tip (cut
4dpg)		 0.86 >More info 0.86 >More info Control for tissue data Original data GEO bulk
41 WT cotyledons 0.87 >More info 0.85 >More info Control for tissue data cotyledons Original data
42 Apex 14DAS 0.87 >More info 0.85 >More info Control for tissue data Original data GEO bulk
43 Cells whole embryo 0.85 >More info 0.87 >More info Control for tissue data whole embryo Original data
44 Atape2 low light 0.86 >More info 0.86 >More info Control for tissue data shoot apical meristem Original data GEO bulk
45 Section Root from70 mm to 340 mm harvested
immediately		 0.85 >More info 0.87 >More info Control for tissue data Original data GEO bulk
46 HDG4 0.86 >More info 0.86 >More info Control for tissue data shoot apical meristem Original data GEO bulk
47 chalazal seed coat 0.85 >More info 0.87 >More info Control for tissue data Original data GEO bulk
48 torpedo-basal 0.85 >More info 0.87 >More info Control for tissue data torpedo embryo basal tissue Original data GEO bulk
49 Apex 5DAS 0.86 >More info 0.85 >More info Control for tissue data Original data GEO bulk
50 Petiol (leaf7) 0.86 >More info 0.85 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
51 ovule 0.86 >More info 0.85 >More info Control for tissue data ovule Original data GEO bulk
52 seed during stratification 48 h S 0.86 >More info 0.85 >More info Control for tissue data seed Original data GEO bulk
53 Pedicels stage15 0.86 >More info 0.85 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
54 EL (leaves 1-2) 14DAS 0.86 >More info 0.85 >More info Control for tissue data Original data GEO bulk
55 lec1-1 Cotyledon Stage Seed 0.86 >More info 0.85 >More info Control for tissue data Original data GEO bulk
56 QC 0.85 >More info 0.86 >More info Control for tissue data FACS-sorted protoplasts from roots Original data
57 seedling 0.86 >More info 0.85 >More info Control for tissue data seedling Original data GEO bulk
58 intact root control 0.85 >More info 0.86 >More info Control for tissue data mock whole root Original data GEO bulk
59 siliques 0.86 >More info 0.85 >More info Control for tissue data Original data GEO bulk
60 flowers 0.86 >More info 0.85 >More info Control for tissue data Original data GEO bulk
61 Regenerating Stump Root Tip Cut 130 mm andn Recut
5 hrs Taking 70 mm of Stump (4dpg)		 0.85 >More info 0.86 >More info Control for tissue data Original data GEO bulk
62 Callus 0.85 >More info 0.85 >More info Control for tissue data callus Original data GEO bulk
63 pericycle control 0.85 >More info 0.85 >More info Control for tissue data mock pericycle Original data GEO bulk
64 lateral nectary stage 11-12 0.86 >More info 0.84 >More info Control for tissue data lateral nectaries Original data GEO bulk
65 flower-buds 0.86 >More info 0.84 >More info Control for tissue data Original data GEO bulk
66 lec1-1 Globular Stage Seed 0.85 >More info 0.85 >More info Control for tissue data Original data GEO bulk
67 Hypocotyl 0.86 >More info 0.84 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
68 chalazal endosperm heart stage 0.86 >More info 0.84 >More info Control for tissue data chalazal endosperm captured by LCM Original data GEO bulk
69 Seeds stage3 with siliques 0.85 >More info 0.85 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
70 Expanding leaf 0.86 >More info 0.84 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
71 chalazal seed coat mature green 0.85 >More info 0.85 >More info Control for tissue data chalazal seed coat captured by LCM Original data GEO bulk
72 Nuclei proembryo 0.84 >More info 0.86 >More info Control for tissue data proembryo Original data
73 unpollinated pistil 0.86 >More info 0.84 >More info Control for tissue data pistil Original data GEO bulk
74 Ambient CO2 fully expanded leaf 0.86 >More info 0.84 >More info Control for tissue data fully expanded leaf Original data
75 seed coat mature green 0.86 >More info 0.84 >More info Control for tissue data seed coat captured by LCM Original data GEO bulk
76 Stem 1st node 0.85 >More info 0.84 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
77 Nuclei suspensor 0.84 >More info 0.85 >More info Control for tissue data suspensor Original data
78 Flowers stage15 0.85 >More info 0.84 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
79 in vivo pollen tube 0.85 >More info 0.84 >More info Control for tissue data pollen tube Original data GEO bulk
80 ML (Mature leaves) 35DAS 0.86 >More info 0.83 >More info Control for tissue data Original data GEO bulk
81 B5 +AA -0.85 >More info -0.84 >More info B5 -AA B5 media and treated with AA Original data
82 silique 0.85 >More info 0.84 >More info Control for tissue data silique Original data GEO bulk
83 epidermis control 0.84 >More info 0.85 >More info Control for tissue data mock epidermis Original data GEO bulk
84 heart-stage-root 0.83 >More info 0.86 >More info Control for tissue data Original data GEO bulk
85 AtHB8 0.85 >More info 0.84 >More info Control for tissue data shoot apical meristem Original data GEO bulk
86 Anther 0.85 >More info 0.84 >More info Control for tissue data anther Original data
87 HMG 0.85 >More info 0.84 >More info Control for tissue data shoot apical meristem Original data GEO bulk
88 S17 0.85 >More info 0.84 >More info Control for tissue data shoot apical meristem Original data GEO bulk
89 heart-stage-cotyledon 0.83 >More info 0.86 >More info Control for tissue data Original data GEO bulk
90 Seeds stage8 w/o siliques 0.85 >More info 0.83 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
91 Cotyledons 0.85 >More info 0.83 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
92 Leaf 0.85 >More info 0.83 >More info Control for tissue data leaf Original data GEO bulk
93 Mature roots 0.84 >More info 0.84 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
94 Proximalhalf (leaf7) 0.85 >More info 0.83 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
95 flower 0.85 >More info 0.83 >More info Control for tissue data flower Original data GEO bulk
96 leaf 0.85 >More info 0.83 >More info Control for tissue data leaf Original data GEO bulk
97 dry seed 0 h 0.85 >More info 0.83 >More info Control for tissue data seed Original data GEO bulk
98 seed freshly harvested H 0.85 >More info 0.83 >More info Control for tissue data seed Original data GEO bulk
99 Petals stage15 0.84 >More info 0.83 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
100 torpedo-meristem 0.83 >More info 0.84 >More info Control for tissue data torpedo embryo meristem tissue Original data GEO bulk
101 Distal half (leaf7) 0.85 >More info 0.82 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
102 Stem 2ndinternode 0.84 >More info 0.83 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
103 seed during stratification 12 h S 0.85 >More info 0.82 >More info Control for tissue data seed Original data GEO bulk
104 Rosette leaf No2 0.85 >More info 0.82 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
105 NAA +AA -0.84 >More info -0.83 >More info NAA -AA B5 media supplemented with 4.5 µM NAA and treated with AA Original data
106 globular-apical 0.82 >More info 0.85 >More info Control for tissue data globular embryo apical tissue Original data GEO bulk
107 globular-basal 0.82 >More info 0.85 >More info Control for tissue data globular embryo basal tissue Original data GEO bulk
108 seed during stratification 1 h S 0.85 >More info 0.82 >More info Control for tissue data seed Original data GEO bulk
109 Cauline leaves 0.84 >More info 0.83 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
110 Emwa1 inoculated psk 3 dpi 0.85 >More info 0.81 >More info Emwa1 inoculated WT 3 dpi Cotyledons Original data GEO bulk
111 cortex 0.83 >More info 0.83 >More info Control for tissue data cortex Original data GEO bulk
112 median nectary stage 14-15 0.83 >More info 0.83 >More info Control for tissue data median nectaries Original data GEO bulk
113 lateral nectary stage 14-15 0.83 >More info 0.83 >More info Control for tissue data lateral nectaries Original data GEO bulk
114 Col dryseed 0.84 >More info 0.82 >More info Control for tissue data dry seeds Original data
115 Senescing leaf 0.84 >More info 0.82 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
116 phloem sieve cells and companion cells 0.83 >More info 0.82 >More info Control for tissue data phloem Original data GEO bulk
117 Sepals stage15 0.83 >More info 0.82 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
118 pskr1-5 0.85 >More info 0.80 >More info wild type Cotyledons Original data GEO bulk
119 Stamen stage15 0.83 >More info 0.81 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
120 mature endodermis glcal 0.82 >More info 0.82 >More info Control for tissue data endodermis Original data GEO bulk
121 root hair 0.82 >More info 0.82 >More info Control for tissue data root hairs Original data GEO bulk
122 torpedo-root 0.82 >More info 0.82 >More info Control for tissue data Original data GEO bulk
123 differentiating xylem 0.82 >More info 0.82 >More info Control for tissue data xylem Original data GEO bulk
124 Mature pollen 0.81 >More info 0.80 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
125 pollen 0.80 >More info 0.80 >More info Control for tissue data pollen grain Original data GEO bulk
126 in vitro pollen tube 0.81 >More info 0.79 >More info Control for tissue data pollen tube Original data
127 seed germinating in countinuous light 24h SL 0.88 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
128 Salicylic Acid 3 h -0.83 >More info -0.70 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
129 Shoot apex inflorescence (after bolting) 0.87 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
130 L17 phyA line -0.81 >More info -0.67 >More info WT seedling Original data GEO bulk
131 chalazal seed coat heart stage 0.85 >More info 0.35 >More info Control for tissue data chalazal seed coat captured by LCM Original data GEO bulk
132 erf104-ko Flg22 4h -0.64 >More info -0.49 >More info erf104-ko H2O 4h Original data GEO bulk
133 chalazal seed coat linear-cotyledon -0.42 >More info -0.63 >More info whole seeds linear-cotyledon Original data GEO bulk
134 chalazal endosperm linear-cotyledon -0.37 >More info -0.62 >More info whole seeds linear-cotyledon Original data GEO bulk
135 sfr3 cold -0.61 >More info -0.35 >More info WT-cold aerial tissues Original data GEO bulk
136 torpedo-apical 0.85 >More info 0.11 >More info Control for tissue data torpedo embryo apical tissue Original data GEO bulk
137 2h KNO3 Whole root 0.61 >More info 0.34 >More info 2h KCl control Whole root Whole root Original data GEO bulk
138 Nuclei whole embryo 0.84 >More info 0.10 >More info Control for tissue data whole embryo Original data
139 Heat shock optimum 0.29 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
140 2hr continuous KCl and MSX control PeR cell -0.41 >More info -0.53 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
141 Starch sheath 2 days NAA 0.62 >More info 0.31 >More info Starch sheath T0 Stem starch sheath under NAA in vitro treatment before cell divission laser capture microdissection Original data GEO bulk
142 ubp1c-1/35S:FLAG-UBP1C IP-RNA 2hLight -0.51 >More info -0.40 >More info ubp1c-1/35S:FLAG-UBP1C Total-RNA 2hLight 2 h light seedling Original data
143 C2H2 ZF TDNA mutant -0.51 >More info -0.39 >More info Col-WT mature pollen Original data GEO bulk
144 T101D 10mM NH4NO3 -0.32 >More info -0.57 >More info col 10mM NH4NO3 Root Original data
145 sex4-3 0.52 >More info 0.36 >More info Col-WT leaves Original data GEO bulk
146 columella control 0.84 >More info 0.04 >More info Control for tissue data mock columella Original data GEO bulk
147 WT Atum 1h 0.51 >More info 0.35 >More info WT 0h Leaf tissue Original data GEO bulk
148 root epidermis and lateral root cap -S 0.33 >More info 0.52 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
149 WT roots - Fe -0.25 >More info -0.60 >More info WT roots + Fe Roots Original data GEO bulk
150 QC pSCR 3h BL 0.31 >More info 0.51 >More info QC pSCR 0h BL brassinosteroid root Original data
151 bri1-116 0.09 >More info 0.73 >More info Col seedling Original data GEO bulk
152 Starch sheath 2 days MS incubation 0.51 >More info 0.30 >More info Starch sheath T0 MS incubation laser capture microdissection Original data GEO bulk
153 ptpks2 0.54 >More info 0.25 >More info Col-WT leaves Original data GEO bulk
154 general seed coat linear-cotyledon -0.26 >More info -0.53 >More info whole seeds linear-cotyledon Original data GEO bulk
155 Col BTH 0.11 >More info 0.67 >More info Col rosettes Original data GEO bulk
156 mpk6-ko H2O 4h 0.56 >More info 0.20 >More info Col-0 H2O 4h Original data GEO bulk
157 siliques AtHb1 control 0.24 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
158 met1-3 fourth-selfed generation -0.20 >More info -0.56 >More info Col WT leaf Original data GEO bulk
159 torpedo-cotyledon 0.83 >More info -0.09 >More info Control for tissue data Original data GEO bulk
160 35S:VND7-VP16-GR+CHX -0.14 >More info -0.60 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
161 HSP90 Reduced RNAi-A3 -0.53 >More info -0.20 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
162 C24 UV1 0.51 >More info 0.21 >More info C24 mock UV seedling Original data
163 4xX2x interploidy cross 0.14 >More info 0.55 >More info 2xX2x cross Original data GEO bulk
164 xyl-grown cell culture- 1h 1mM Suc -0.11 >More info -0.55 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
165 rdr6-15 0.10 >More info 0.55 >More info Col-0 plant inflorescence Original data
166 myb3 myb3r4d -0.07 >More info -0.56 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
167 2xX6x interploidy cross -0.09 >More info -0.54 >More info 2xX2x cross Original data GEO bulk
168 35S::ERF104 H2O 4h 0.55 >More info 0.02 >More info Col-0 H2O 4h Original data GEO bulk
169 erf104-ko H2O 4h 0.52 >More info 0.00 >More info Col-0 H2O 4h Original data GEO bulk
170 2xX4x interploidy cross 0.03 >More info -0.54 >More info 2xX2x cross Original data GEO bulk
171 CCA1-ox 6am non-polysomal -0.03 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
172 Laer pretreat GA Flg22 1h -0.27 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
173 Leafminer damaged seedlings -0.18 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
174 cngc1-3 0.50 >More info -0.14 >More info Col-0 root Original data GEO bulk
175 Col0-PsmES4326-24hpi -0.31 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
176 IAA7mII over-expressor IAA Treated -0.43 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk