CSP1 immonoprecipitated RNA 35S:HF-RPL18 cold

4.0:Analysis result - correlation network

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Module-based correlation network(MCN) centered on CSP1 immonoprecipitated RNA 35S:HF-RPL18 cold

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List of experiments correlated with "CSP1 immonoprecipitated RNA 35S:HF-RPL18 cold"

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Score	Experiment	Correlation from CSP1 immonoprecipitated RNA 35S:HF-RPL18 cold	Correlation to CSP1 immonoprecipitated RNA 35S:HF-RPL18 cold	Control Experiment	Treatment	Tissue	Link to original data	Experimental Category
1	CSP1 immonoprecipitated RNA 35S:HF-RPL18 cold	1.00 >More info	1.00 >More info	CSP1 immonoprecipitated RNA 35S:HF-RPL18	12h cold (4C)	rosettes	Original data	GEO bulk
2	Total RNA csp1 cold	0.80 >More info	0.83 >More info	Total RNA csp1	12h cold (4C)	rosettes	Original data	GEO bulk
3	4C 24h(SOIL)	0.69 >More info	0.78 >More info	4C 0h(SOIL)			Original data	GEO bulk
4	CSP1 immonoprecipitated RNA 35S:AtCSP1-FH1 cold	0.74 >More info	0.73 >More info	CSP1 immonoprecipitated RNA 35S:AtCSP1-FH1	12h cold (4C)	rosettes	Original data	GEO bulk
5	short 10-degree-	0.61 >More info	0.79 >More info	control short			Original data	GEO bulk
6	short 8-degree-	0.67 >More info	0.70 >More info	control short			Original data	GEO bulk
7	4C 24h	0.64 >More info	0.70 >More info	4C 0h			Original data	GEO bulk
8	WT 24H Cold	0.60 >More info	0.67 >More info	WT control			Original data	GEO bulk
9	Cold Stress 24 h (shoot)	0.58 >More info	0.64 >More info	Stress mock 24 h (shoot)			Original data	Stress treatments
10	4C 7d(SOIL)	0.58 >More info	0.60 >More info	4C 0h(SOIL)			Original data	GEO bulk
11	ws 24h4c q8ws	0.56 >More info	0.61 >More info	col 0h4c	cold-treated moved to a 4C chamber for 24h	whole seedlings	Original data
12	WT 6H Cold	0.53 >More info	0.63 >More info	WT control			Original data	GEO bulk
13	short 12-degree-	0.56 >More info	0.57 >More info	control short			Original data	GEO bulk
14	WT 24h cold	0.54 >More info	0.59 >More info	WT warm	24h cold	entire aerial part	Original data	GEO bulk
15	WT cold 24h	0.59 >More info	0.54 >More info	WT cold 0h	cold at 4°C	seedlings	Original data	GEO bulk
16	long 8-degree-	0.59 >More info	0.54 >More info	control long			Original data	GEO bulk
17	Cold Stress 24 h (root)	0.63 >More info	0.49 >More info	Stress mock 24 h (root)			Original data	Stress treatments
18	Col 3d	0.58 >More info	0.52 >More info	Col CA		Leaves	Original data
19	4C 7d	0.56 >More info	0.53 >More info	4C 0h			Original data	GEO bulk
20	camta1/2 warm	-0.53 >More info	-0.56 >More info	WT 24h cold		entire aerial part	Original data	GEO bulk
21	col 24h4c set4	0.54 >More info	0.54 >More info	col 0h4c	cold-treated moved to a 4C chamber for 24h	whole seedlings	Original data
22	dde2-2 9 hpi A. brassicicola	0.41 >More info	0.66 >More info	Col-0 9 hpi mock		3rd-5th true leaves	Original data
23	PRR5-VP 18h light on	0.54 >More info	0.49 >More info	WT 18h light on		whole plant	Original data	GEO bulk
24	20h Col-0	-0.38 >More info	-0.64 >More info	00h Col-0			Original data	GEO bulk
25	WT cold 12 h	0.48 >More info	0.53 >More info	WT cold 0h	GSM955987	seedlings	Original data	GEO bulk
26	GO5; 8h switch to ambient CO2 concentrations;	0.45 >More info	0.56 >More info	WT; 8h switch to ambient CO2 concentrations;		2 whole rosettes	Original data
27	16h Col-0	-0.41 >More info	-0.57 >More info	00h Col-0			Original data	GEO bulk
28	WT (Col-0) inflorescence moderate drought day 5	0.47 >More info	0.51 >More info	WT (Col-0) inflorescence well-watered day 0 [C02]		Unopen flower buds	Original data
29	long 10-degree-	0.50 >More info	0.47 >More info	control long			Original data	GEO bulk
30	PRR5-VP 12h light on	0.45 >More info	0.51 >More info	WT 12h light on		whole plant	Original data	GEO bulk
31	Nicotinamide-69hr	0.42 >More info	0.52 >More info	WT-untreated-69hr	nicotinamide	aerial tissue	Original data	GEO bulk
32	opr3 JA 0.5 h	-0.31 >More info	-0.63 >More info	opr3 0 h			Original data	GEO bulk
33	Te 1d	0.36 >More info	0.57 >More info	Te CA		Leaves	Original data
34	Mutant sav3-2 (WL)	-0.39 >More info	-0.53 >More info	Col-0 (WL)			Original data	GEO bulk
35	sav3-2 light	-0.39 >More info	-0.53 >More info	Col-0 light		seedlings	Original data	GEO bulk
36	Ambient CO2 expanding leaf	-0.34 >More info	-0.58 >More info	Control for tissue data		expanding leaf	Original data
37	CBF3 100mM NaCl	0.31 >More info	0.60 >More info	Ws 100mM NaCl	100mM NaCl	leaf	Original data	GEO bulk
38	Ambient CO2 leaf primordia	-0.31 >More info	-0.57 >More info	Control for tissue data		leaf primordia	Original data
39	Ambient CO2 fully expanded leaf	-0.32 >More info	-0.55 >More info	Control for tissue data		fully expanded leaf	Original data
40	short 14-degree-	0.36 >More info	0.51 >More info	control short			Original data	GEO bulk
41	IAA7mII over-expressor IAA Treated	0.18 >More info	0.69 >More info	empty vector IAA Treated			Original data	GEO bulk
42	Mutant sav3-2 (SH)	-0.29 >More info	-0.55 >More info	Col-0 (SH)			Original data	GEO bulk
43	sav3-2 shade	-0.29 >More info	-0.55 >More info	Col-0 shade		seedlings	Original data	GEO bulk
44	4C 0h	0.50 >More info	0.33 >More info	22C 0h			Original data	GEO bulk
45	35S::CBF2	0.17 >More info	0.65 >More info	Ws2			Original data	GEO bulk
46	Shoot apex transition (before bolting)	-0.23 >More info	-0.59 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
47	E.coli TUV86 2 fliC 7h	0.28 >More info	0.53 >More info	Mock 7h	E.coli TUV86 2 fliC		Original data	GEO bulk
48	CCA14 dark late	0.26 >More info	0.54 >More info	Col dark late			Original data	GEO bulk
49	bri1-116	0.06 >More info	0.73 >More info	Col		seedling	Original data	GEO bulk
50	unpollinated pistil	-0.22 >More info	-0.57 >More info	Control for tissue data		pistil	Original data	GEO bulk
51	Rosette leaf No12	-0.18 >More info	-0.59 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
52	toc1-1-89hr	0.19 >More info	0.58 >More info	WT-untreated-89hr	none	seedlings aerial tissue	Original data	GEO bulk
53	seed germinating in countinuous light 48 h SL	-0.21 >More info	-0.55 >More info	Control for tissue data		seed	Original data	GEO bulk
54	Laer pretreat GA Flg22 1h	0.04 >More info	0.71 >More info	Laer pretreat water control		leaf discs	Original data	GEO bulk
55	Shoot apex vegetative &Young leaves	-0.16 >More info	-0.58 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
56	Shoot apex vegetative	-0.16 >More info	-0.58 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
57	Carpels stage15	-0.18 >More info	-0.56 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
58	E.coli 0157 H7 7h	0.14 >More info	0.60 >More info	Mock 7h	E.coli 0157 H7		Original data	GEO bulk
59	Bud	-0.21 >More info	-0.53 >More info	Control for tissue data		pollen grains and tubes	Original data
60	B5 +AA	0.20 >More info	0.54 >More info	B5 -AA	B5 media and treated with AA		Original data
61	root cortex 40 mM NaCl	0.50 >More info	0.23 >More info	root cortex			Original data	GEO bulk
62	Flower (stage12)	-0.15 >More info	-0.57 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
63	bZIP1ko mutant N+Light-	0.03 >More info	0.69 >More info	WT-sib N+Light-		whole plant	Original data	GEO bulk
64	NAA +AA	0.18 >More info	0.54 >More info	NAA -AA	B5 media supplemented with 4.5 µM NAA and treated with AA		Original data
65	Petiol (leaf7)	-0.15 >More info	-0.55 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
66	lec1-1 24h post-fertilization Seed	-0.17 >More info	-0.53 >More info	Control for tissue data			Original data	GEO bulk
67	seed germinating in countinuous light 12 h SL	-0.15 >More info	-0.55 >More info	Control for tissue data		seed	Original data	GEO bulk
68	ovule	-0.16 >More info	-0.54 >More info	Control for tissue data		ovule	Original data	GEO bulk
69	Hypocotyl	-0.13 >More info	-0.56 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
70	pif4pif5 mut dark	-0.14 >More info	-0.55 >More info	WT dark			Original data	GEO bulk
71	Inflorescences ler	-0.13 >More info	-0.56 >More info	Control for tissue data		inflorescences	Original data	GEO bulk
72	E.orontii Infection 6 h	0.19 >More info	0.50 >More info	Uninfection 6 h			Original data	Elicitor treatments
73	Proximalhalf (leaf7)	-0.13 >More info	-0.55 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
74	WT cotyledons	-0.12 >More info	-0.56 >More info	Control for tissue data		cotyledons	Original data
75	Stem 1st node	-0.09 >More info	-0.59 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
76	etr1 1% sucrose 12-day-old	-0.18 >More info	-0.50 >More info	Col-0 1% sucrose 12-day-old			Original data	GEO bulk
77	Col whole leaf 3dpi	0.15 >More info	0.52 >More info	Col whole leaf 0h UI		whole leaf	Original data	GEO bulk
78	sid2-1 warm	-0.12 >More info	-0.55 >More info	WT warm		entire aerial part	Original data	GEO bulk
79	siliques	-0.13 >More info	-0.54 >More info	Control for tissue data			Original data	GEO bulk
80	flower-buds	-0.11 >More info	-0.55 >More info	Control for tissue data			Original data	GEO bulk
81	BAM8-Cat Ox untreated	-0.14 >More info	-0.52 >More info	WT untreated	none	shoot	Original data
82	Pedicels stage15	-0.09 >More info	-0.57 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
83	Distal half (leaf7)	-0.11 >More info	-0.54 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
84	Flowers stage15	-0.11 >More info	-0.54 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
85	lateral nectary stage 11-12	-0.13 >More info	-0.52 >More info	Control for tissue data		lateral nectaries	Original data	GEO bulk
86	LAS	-0.14 >More info	-0.51 >More info	Control for tissue data		shoot apical meristem	Original data	GEO bulk
87	in vivo pollen tube	-0.15 >More info	-0.50 >More info	Control for tissue data		pollen tube	Original data	GEO bulk
88	shoot hypoxia p35S	-0.01 >More info	-0.63 >More info	shoot hypoxia total			Original data	GEO bulk
89	Apex 14DAS	-0.07 >More info	-0.57 >More info	Control for tissue data			Original data	GEO bulk
90	Leafminer damaged seedlings	0.07 >More info	0.56 >More info	Healthy seedlings		leaves	Original data	GEO bulk
91	Rosette leaf No2	-0.10 >More info	-0.53 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
92	FarRed Light 45min	0.02 >More info	0.61 >More info	White Light 45min			Original data	Light treatments
93	Ba1 UV	-0.10 >More info	-0.53 >More info	Ba1 mock	UV	seedling	Original data
94	Leaf	-0.08 >More info	-0.55 >More info	Control for tissue data		leaf	Original data	GEO bulk
95	Col BTH	-0.04 >More info	0.67 >More info	Col		rosettes	Original data	GEO bulk
96	KAN1	-0.11 >More info	-0.52 >More info	Control for tissue data		shoot apical meristem	Original data	GEO bulk
97	Mature roots	-0.11 >More info	-0.51 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
98	lec1-1 Globular Stage Seed	-0.12 >More info	-0.50 >More info	Control for tissue data			Original data	GEO bulk
99	Section Root from70 mm to 340 mm harvested immediately	-0.10 >More info	-0.52 >More info	Control for tissue data			Original data	GEO bulk
100	seedling	-0.05 >More info	-0.56 >More info	Control for tissue data		seedling	Original data	GEO bulk
101	flowers	-0.09 >More info	-0.52 >More info	Control for tissue data			Original data	GEO bulk
102	Atape2 low light	-0.10 >More info	-0.51 >More info	Control for tissue data		shoot apical meristem	Original data	GEO bulk
103	flower	-0.08 >More info	-0.53 >More info	Control for tissue data		flower	Original data	GEO bulk
104	Regenerating Stump Root Tip Cut 130 mm andn Recut 0 hrs Taking 70 mm of Stump (4dpg)	-0.06 >More info	-0.54 >More info	Control for tissue data			Original data	GEO bulk
105	Cotyledons	-0.08 >More info	-0.52 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
106	Stem 2ndinternode	-0.03 >More info	-0.57 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
107	seed germinating in countinuous light 6 h SL	-0.08 >More info	-0.52 >More info	Control for tissue data		seed	Original data	GEO bulk
108	Callus	-0.09 >More info	-0.51 >More info	Control for tissue data		callus	Original data	GEO bulk
109	HDG4	-0.09 >More info	-0.51 >More info	Control for tissue data		shoot apical meristem	Original data	GEO bulk
110	Seeds stage3 with siliques	-0.05 >More info	-0.54 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
111	Col-0-avrB-6h	0.09 >More info	0.50 >More info	Col-0-untreated-control	avrB	leaf tissue	Original data	GEO bulk
112	Cells whole embryo	-0.09 >More info	-0.50 >More info	Control for tissue data		whole embryo	Original data
113	Nuclei proembryo	-0.07 >More info	-0.51 >More info	Control for tissue data		proembryo	Original data
114	Expanding leaf	-0.02 >More info	-0.55 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
115	EL (leaves 1-2) 14DAS	-0.04 >More info	-0.53 >More info	Control for tissue data			Original data	GEO bulk
116	pskr1-5	-0.04 >More info	-0.53 >More info	wild type		Cotyledons	Original data	GEO bulk
117	Emwa1 inoculated psk 3 dpi	-0.06 >More info	-0.51 >More info	Emwa1 inoculated WT 3 dpi		Cotyledons	Original data	GEO bulk
118	Cauline leaves	-0.04 >More info	-0.52 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
119	siliques AtHb1 control	0.04 >More info	0.52 >More info	siliques WT control	control	silique	Original data	GEO bulk
120	Root from tip to 130 mm proximal to tip (cut 8dpg)	-0.06 >More info	-0.50 >More info	Control for tissue data			Original data	GEO bulk
121	silique	-0.06 >More info	-0.50 >More info	Control for tissue data		silique	Original data	GEO bulk
122	leaf	-0.04 >More info	-0.52 >More info	Control for tissue data		leaf	Original data	GEO bulk
123	Col0-PsmES4326-24hpi	-0.05 >More info	0.61 >More info	Col0-mock-24hpi		leaf	Original data	GEO bulk
124	lec1-1 Mature Green Seed	-0.05 >More info	-0.50 >More info	Control for tissue data			Original data	GEO bulk
125	Regenerating Stump Root Tip Cut 130 mm andn Recut 13 hrs Taking 70 mm of Stump (4dpg)	-0.04 >More info	-0.51 >More info	Control for tissue data			Original data	GEO bulk
126	Regenerating Stump Root Tip Cut 130 mm andn Recut 0 hrs Taking 70 mm of Stump (8 dpg)	-0.05 >More info	-0.50 >More info	Control for tissue data			Original data	GEO bulk
127	GST 4 h (leaf)	0.04 >More info	0.50 >More info	Mock 4 h (leaf)			Original data	Elicitor treatments
128	ML (Mature leaves) 35DAS	-0.03 >More info	-0.51 >More info	Control for tissue data			Original data	GEO bulk
129	IBM1 knockout	0.01 >More info	0.53 >More info	WT			Original data	GEO bulk
130	Regenerating Stump Root Tip Cut 130 mm andn Recut 22 hrs Taking 70 mm of Stump (4dpg)	-0.03 >More info	-0.51 >More info	Control for tissue data			Original data	GEO bulk
131	Nuclei suspensor	-0.03 >More info	-0.50 >More info	Control for tissue data		suspensor	Original data
132	Apex 5DAS	0.03 >More info	-0.55 >More info	Control for tissue data			Original data	GEO bulk
133	CCA1-ox 6am non-polysomal	0.01 >More info	0.51 >More info	WT 6am non-polysomal		aerial part	Original data
134	lec1-1 Post-Mature Green Seed	0.00 >More info	-0.50 >More info	Control for tissue data			Original data	GEO bulk
135	seed germinating in countinuous light 24h SL	-0.17 >More info	0.67 >More info	Control for tissue data		seed	Original data	GEO bulk
136	WT NAA 2h	-0.04 >More info	0.53 >More info	WT 0h		Leaf tissue	Original data	GEO bulk
137	torpedo-basal	0.03 >More info	-0.50 >More info	Control for tissue data		torpedo embryo basal tissue	Original data	GEO bulk
138	shoot control p35S	0.08 >More info	-0.54 >More info	shoot control total			Original data	GEO bulk
139	heart-stage-root	0.05 >More info	-0.51 >More info	Control for tissue data			Original data	GEO bulk
140	shoot hypoxia pRBCS	0.10 >More info	-0.55 >More info	shoot hypoxia total			Original data	GEO bulk
141	Shoot apex inflorescence (after bolting)	-0.22 >More info	0.65 >More info	Control for tissue data			Original data	Developmental series; organs / tissues at different ages
142	35S:RPS4 eds1-2 T0	-0.08 >More info	0.50 >More info	35S:RPS4 T0		leaves	Original data
143	Heat shock optimum	-0.36 >More info	0.65 >More info	Heat shock baseline	Photosynthesis at optimum temperature	leaf first fully expanded	Original data	GEO bulk
144	2xX6x interploidy cross	-0.32 >More info	0.50 >More info	2xX2x cross			Original data	GEO bulk