4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on GiantCell Root
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "GiantCell Root"  Help Download transcriptome of top 30
Score Experiment Correlation from
GiantCell Root		 Correlation to
GiantCell Root		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 GiantCell Root 1.00 >More info 1.00 >More info Control Root laser captured giant cells Original data GEO bulk
2 GiantCell Root 0.82 >More info 0.77 >More info Control Root laser captured giant cells Original data GEO bulk
3 Leaf wounded -0.52 >More info -0.67 >More info Leaf control vegetative leaf Original data GEO bulk
4 -Sulfate 24 h 0.34 >More info 0.82 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
5 root callus inducing medium 48 h 0.65 >More info 0.50 >More info root callus inducing medium 0 h 48 hours after incubating on callus inducing medium root explants Original data GEO bulk
6 root callus inducing medium 12 h 0.65 >More info 0.48 >More info root callus inducing medium 0 h 12 hours after incubating on callus inducing medium root explants Original data GEO bulk
7 bHLH122 ox 0.50 >More info 0.63 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
8 root callus inducing medium 24h 0.65 >More info 0.48 >More info root callus inducing medium 0 h 24 hours after incubating on callus inducing medium root explants Original data GEO bulk
9 abi1 hypocotyl -0.48 >More info -0.65 >More info Ler hypocotyl hypocotyl Original data GEO bulk
10 4C 2h(SOIL) -0.44 >More info -0.68 >More info 4C 0h(SOIL) Original data GEO bulk
11 myb61 xylem -0.46 >More info -0.65 >More info wt xylem xylem Original data GEO bulk
12 35S::MBF1c -0.56 >More info -0.54 >More info control Original data GEO bulk
13 WT 3H Cold -0.42 >More info -0.68 >More info WT control Original data GEO bulk
14 rosette Light Wounded -0.54 >More info -0.55 >More info rosette Light Control Original data GEO bulk
15 root callus inducing medium 96 h 0.64 >More info 0.45 >More info root callus inducing medium 0 h 96 hours after incubating on callus inducing medium root explants Original data GEO bulk
16 FLIGHT TAGESB plate6 ROOTS -0.42 >More info -0.65 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
17 bri1-116 0.33 >More info 0.73 >More info Col seedling Original data GEO bulk
18 WT-Dry -0.41 >More info -0.62 >More info WT-CK dehydration treatment 1h Original data
19 WT+chitooctaose -0.51 >More info -0.51 >More info WT+water chitooctaose seedlings Original data GEO bulk
20 whole roots 140 mM NaCl 30 minutes -0.40 >More info -0.62 >More info whole roots standard Original data GEO bulk
21 AtLysM RLK1 mutant chitooctaose 0.50 >More info 0.51 >More info WT chitooctaose Original data GEO bulk
22 Laer Flg22(Agrobacterium) 2h 0.44 >More info 0.57 >More info Laer Control leaf discs Original data GEO bulk
23 aba1 hypocotyl -0.48 >More info -0.53 >More info Ler hypocotyl hypocotyl Original data GEO bulk
24 myb61 cork -0.39 >More info -0.62 >More info wt cork cork Original data GEO bulk
25 Col 8h -0.49 >More info -0.52 >More info Col CA Leaves Original data
26 ex2 flu dark 8hours/30 minute light -0.35 >More info -0.65 >More info col dark 8hours/30 minute light Original data GEO bulk
27 axr1 hypocotyl -0.50 >More info -0.49 >More info wt hypocotyl hypocotyl Original data GEO bulk
28 ein5-1 ski2-3 -0.53 >More info -0.44 >More info Col-0 aerial tissue Original data
29 OsSAP11 expressing 0.52 >More info 0.45 >More info WT seedlings Original data GEO bulk
30 npr1 sni1 SA -0.50 >More info -0.47 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
31 IRP1-OE-Ctrl--root -0.50 >More info -0.46 >More info COL-0-Ctrl--root root Original data
32 root stele -S 0.52 >More info 0.44 >More info root stele pH5.7 Original data GEO bulk
33 Light -0.44 >More info -0.52 >More info Control Original data GEO bulk
34 WT 6H Cold -0.41 >More info -0.55 >More info WT control Original data GEO bulk
35 Protoplast Induced -0.36 >More info -0.59 >More info Uninduced Original data GEO bulk
36 vtc2 mature somatic embryo -0.43 >More info -0.51 >More info WT mature somatic embryo mature somatic embryo Original data GEO bulk
37 4C 1h -0.24 >More info -0.70 >More info 4C 0h Original data GEO bulk
38 GA -0.53 >More info -0.40 >More info none GA Rosette Original data GEO bulk
39 rosette Dark Wounded -0.50 >More info -0.43 >More info rosette Dark Control Original data GEO bulk
40 flu dark 8hours/30 minute light -0.29 >More info -0.64 >More info col dark 8hours/30 minute light Original data GEO bulk
41 TNT-seedlings -0.34 >More info -0.59 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
42 npr1 sni1 ssn2 SA 0.50 >More info 0.42 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
43 Shoot apex inflorescence (after bolting) 0.26 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
44 21h-DC3000 hrpA 0.41 >More info 0.50 >More info 21h-DC3000 leaves Original data GEO bulk
45 IRP1-OE-Fe--root -0.60 >More info -0.30 >More info COL-0-Fe--root root Original data
46 Col-0 35S:MBS1 HL 3h 0.37 >More info 0.52 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
47 myb3 myb3r4d -0.54 >More info -0.34 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
48 A2hsfa1-ox in quadruple mutant 0.51 >More info 0.37 >More info hsfa1 quadruple mutant whole seedling Original data GEO bulk
49 flu over-tAPX -0.50 >More info -0.38 >More info WT Col Original data GEO bulk
50 Leafminer locally damaged thaliana seedlings -0.55 >More info -0.32 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
51 seed germinating in countinuous light 24h SL 0.20 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
52 2hr transitory KNO3 PrR cell -0.22 >More info -0.65 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
53 WT no Pi -0.53 >More info -0.33 >More info WT complete seedlings Original data
54 WT 3h -P -0.30 >More info -0.56 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
55 3x(m) -0.20 >More info -0.66 >More info 2x two week old seedlings Original data
56 root longitudinal zone-3 low sulfur 0.52 >More info 0.33 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
57 Wounding Stress3 h (shoot) -0.50 >More info -0.35 >More info Stress mock 3 h (shoot) Original data Stress treatments
58 Differentiation 36h 0.50 >More info 0.34 >More info Differentiation 0h leaves Original data
59 SHR-GR Time 1H Dex -0.51 >More info -0.32 >More info SHR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
60 gai MeJA 1h 0.56 >More info 0.27 >More info Laer MeJA 1h leaf discs Original data GEO bulk
61 light-hs 0.51 >More info 0.32 >More info light-control seedling Original data
62 erf5 erf6 +chitooctaose -0.32 >More info -0.50 >More info WT+chitooctaose chitooctaose seedlings Original data GEO bulk
63 opr3 JA 0.5 h -0.21 >More info -0.61 >More info opr3 0 h Original data GEO bulk
64 CDB1-Knockout 0.21 >More info 0.61 >More info WT Original data GEO bulk
65 camta1 root drought 0.50 >More info 0.31 >More info Col-0 root drought root Original data GEO bulk
66 CMV-A2b mutant -0.52 >More info -0.29 >More info Mock-At Aerial tissues Original data GEO bulk
67 phr1 phl1 Root-Pi -0.55 >More info -0.26 >More info WT Shoot+Pi roots Original data GEO bulk
68 Differentiation 48h 0.51 >More info 0.30 >More info Differentiation 0h leaves Original data
69 Col-Luc WT 3h antimycin A -0.53 >More info -0.28 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
70 ex1 flu dark 8hours/30 minute light -0.30 >More info -0.51 >More info col dark 8hours/30 minute light Original data GEO bulk
71 12m.KCl -0.29 >More info -0.52 >More info To. KCl 14 day old Roots Original data GEO bulk
72 1h +Pi 0.30 >More info 0.51 >More info 1h -Pi root Original data GEO bulk
73 Kas-1 -Fe 24h 0.27 >More info 0.54 >More info Kas-1 +Fe 24h roots Original data GEO bulk
74 Kas -Fe 24h Roots 0.27 >More info 0.54 >More info Kas +Fe 24h Roots Original data GEO bulk
75 atmospheric CO2 high Mg shoot -0.53 >More info -0.26 >More info atmospheric CO2 normal Mg shoot Shoot Original data
76 SHR-GR Time 3H Dex -0.20 >More info -0.58 >More info SHR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
77 stn7-1 0.50 >More info 0.27 >More info Col-0 rosette leaves Original data GEO bulk
78 downy mildew cotyledons late stage -0.50 >More info -0.27 >More info mock inoculated Cotyledons Original data GEO bulk
79 WT Shoot-Pi -0.51 >More info -0.26 >More info WT Shoot+Pi shoots Original data GEO bulk
80 Stem tissue 2 days NAA 0.24 >More info 0.51 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
81 HARAP aerobic 0.22 >More info 0.53 >More info WT aerobic aerobic Original data GEO bulk
82 1 h Light IP RNA 0.50 >More info 0.24 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
83 M6PR transgenic 0mM NaCl -0.51 >More info -0.23 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
84 rosette leaves fdh -0.52 >More info -0.21 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
85 Col BTH 0.06 >More info 0.67 >More info Col rosettes Original data GEO bulk
86 opr3 OPDA 0.5 h -0.22 >More info -0.50 >More info opr3 0 h Original data GEO bulk
87 CabpBVR2 -0.51 >More info -0.20 >More info WT Original data GEO bulk
88 SOS1 0mM NaCl -0.51 >More info -0.19 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
89 red illumination +lincomycin 0.13 >More info 0.51 >More info red illumination -lincomycin Original data GEO bulk
90 Laer pretreat GA Flg22 1h -0.12 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
91 seedling -S Exp -0.19 >More info 0.72 >More info seedling FN Exp seedling Original data
92 CCA1-ox 6am non-polysomal 0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
93 IAA7mII over-expressor IAA Treated -0.25 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
94 Heat shock optimum -0.29 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
95 siliques AtHb1 control -0.16 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
96 Col0-PsmES4326-24hpi -0.40 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
97 Leafminer damaged seedlings -0.55 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk