4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on GiantCell Root
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List of experiments correlated with "GiantCell Root"  Help Download transcriptome of top 30
Score Experiment Correlation from
GiantCell Root		 Correlation to
GiantCell Root		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 GiantCell Root 1.00 >More info 1.00 >More info Control Root laser captured giant cells Original data GEO bulk
2 GiantCell Root 0.77 >More info 0.82 >More info Control Root laser captured giant cells Original data GEO bulk
3 phr1 phl1 Root-Pi -0.59 >More info -0.60 >More info WT Shoot+Pi roots Original data GEO bulk
4 csn5 (csn5a-2 csn5b) dark 0.55 >More info 0.56 >More info WT dark Original data GEO bulk
5 cngc19 -0.59 >More info -0.50 >More info Col-0 root Original data GEO bulk
6 L2.4 mutant 0.42 >More info 0.65 >More info Wt Original data GEO bulk
7 csn3-1 dark 0.53 >More info 0.52 >More info WT dark Original data GEO bulk
8 root stele -S 0.44 >More info 0.61 >More info root stele pH5.7 Original data GEO bulk
9 phr1 Shoot-Pi 0.54 >More info 0.50 >More info WT Root-Pi shoots Original data GEO bulk
10 CabpBVR2 -0.54 >More info -0.50 >More info WT Original data GEO bulk
11 -Sulfate 24 h 0.32 >More info 0.72 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
12 Wounding Stress3 h (root) -0.44 >More info -0.60 >More info Stress mock 3 h (root) Original data Stress treatments
13 bri1-116 0.30 >More info 0.73 >More info Col seedling Original data GEO bulk
14 WT-16ºC -0.37 >More info -0.65 >More info WT-23ºC Original data GEO bulk
15 root callus inducing medium 96 h 0.49 >More info 0.53 >More info root callus inducing medium 0 h 96 hours after incubating on callus inducing medium root explants Original data GEO bulk
16 Ovary 0.49 >More info 0.52 >More info Seedling Original data GEO bulk
17 35SpBVR3 -0.48 >More info -0.53 >More info WT Original data GEO bulk
18 GA4 3 h (ga1 seed) 0.53 >More info 0.46 >More info Mock 3 h Original data Effect of gibberellin during seed imbibition
19 csn4-1 mutant 0.51 >More info 0.48 >More info WT dark Original data GEO bulk
20 (Col-0)+200 uM As 0.51 >More info 0.48 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
21 Ws HS 0.41 >More info 0.58 >More info Ws control heat shocked seedling Original data GEO bulk
22 35:SUB1C -0.45 >More info -0.54 >More info WT whole seedling Original data GEO bulk
23 erf5 erf6 +chitooctaose -0.39 >More info -0.59 >More info WT+chitooctaose chitooctaose seedlings Original data GEO bulk
24 root longitudinal zone-1 low sulfur 0.39 >More info 0.59 >More info root longitudinal zone-1 pH 5.7 Original data GEO bulk
25 E2Fa-Dpa 0.46 >More info 0.51 >More info WT Original data GEO bulk
26 root callus inducing medium 48 h 0.41 >More info 0.54 >More info root callus inducing medium 0 h 48 hours after incubating on callus inducing medium root explants Original data GEO bulk
27 IAA 1h 0.29 >More info 0.66 >More info control 1h root Original data GEO bulk
28 Stigma 0.50 >More info 0.44 >More info Seedling Original data GEO bulk
29 IRP1-OE-Fe--shoot -0.41 >More info -0.53 >More info COL-0-Fe--shoot shoot Original data
30 dorn1-1 Root MES buffer 30 min 0.36 >More info 0.56 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
31 GR-REV 60min 0.38 >More info 0.53 >More info Col 60min Original data GEO bulk
32 TAMM27 roots 2hr KNO3 nitrogen 0.34 >More info 0.57 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
33 Col-0 HS 0.39 >More info 0.51 >More info Col-0 control heat shocked seedling Original data GEO bulk
34 WT (Col-0) heat shock 0.39 >More info 0.51 >More info WT (Col-0) whole seedling Original data GEO bulk
35 WT 3H Cold -0.20 >More info -0.70 >More info WT control Original data GEO bulk
36 toc1-1-85hr 0.34 >More info 0.55 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
37 root callus inducing medium 12 h 0.37 >More info 0.51 >More info root callus inducing medium 0 h 12 hours after incubating on callus inducing medium root explants Original data GEO bulk
38 root epidermis and lateral root cap -S 0.27 >More info 0.61 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
39 Mutant iaa17-6 -0.33 >More info -0.54 >More info Col Original data GEO bulk
40 line J1551-5 days control + 2 days salt s 0.31 >More info 0.56 >More info line J1551-7 days-control Original data
41 Light -0.36 >More info -0.51 >More info Control Original data GEO bulk
42 roottip hypoxia pSHR 0.33 >More info 0.52 >More info roottip hypoxia total hypoxia roottip Original data GEO bulk
43 ahg2-1sid2-2 0.31 >More info 0.54 >More info WT (Col) control Original data GEO bulk
44 WT heat shock 0.34 >More info 0.51 >More info WT untreated above-ground parts Original data GEO bulk
45 root endodermis and quiescent center pH4.6 0.29 >More info 0.56 >More info root endodermis and quiescent center pH5.7 Original data GEO bulk
46 Genotoxic Stress 3 h (shoot) 0.20 >More info 0.64 >More info Stress mock 3 h (shoot) Original data Stress treatments
47 toc1-1-81hr 0.33 >More info 0.51 >More info WT-untreated-81hr none seedlings aerial tissue Original data GEO bulk
48 bHLH122 ox 0.21 >More info 0.63 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
49 vtc1-1 0.27 >More info 0.56 >More info Col-0 whole plant Original data GEO bulk
50 21h-DC3000 avrRpm1 0.19 >More info 0.64 >More info 21h-DC3000 leaves Original data GEO bulk
51 35S::MBF1c -0.24 >More info -0.59 >More info control Original data GEO bulk
52 Cs shoot -0.17 >More info -0.65 >More info control shoot Original data GEO bulk
53 vtc2 mature somatic embryo -0.25 >More info -0.57 >More info WT mature somatic embryo mature somatic embryo Original data GEO bulk
54 Shoot apex inflorescence (after bolting) 0.16 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
55 DUO1 induced 24h 0.31 >More info 0.50 >More info 24hr-not-induced whole plant Original data GEO bulk
56 DUO1 induced 12h 0.28 >More info 0.53 >More info 12hr-not-induced whole plant Original data GEO bulk
57 gpa1 +ABA GC 0.21 >More info 0.60 >More info Col-0 +ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
58 4C 2h(SOIL) -0.14 >More info -0.66 >More info 4C 0h(SOIL) Original data GEO bulk
59 cngc1-3 -0.50 >More info -0.29 >More info Col-0 root Original data GEO bulk
60 TA induced -0.20 >More info -0.59 >More info Methanol TA Suspension cells Original data GEO bulk
61 dark +H2O2 0.23 >More info 0.56 >More info dark 5 mM H2O2 seedling Original data GEO bulk
62 expressing C2 Mock 0.27 >More info 0.50 >More info LUC2C Original data GEO bulk
63 JA 24h -0.24 >More info -0.53 >More info EtOH 24h 24hr Original data GEO bulk
64 Leaf wounded -0.18 >More info -0.58 >More info Leaf control vegetative leaf Original data GEO bulk
65 low CO2 + light -0.22 >More info -0.53 >More info normal CO2 + light Original data GEO bulk
66 seedlings by volatiles from leafminer damaged
Lima bean 24h		 0.22 >More info 0.52 >More info seedlings by volatiles from healthy Lima bean 24h leaves Original data GEO bulk
67 SCR 96hr-S 0.23 >More info 0.51 >More info SCR 0hr endodermis Original data
68 dor control -0.22 >More info -0.50 >More info WT control Original data GEO bulk
69 gpa1 -ABA GC 0.13 >More info 0.59 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
70 ABA JA 24h -0.21 >More info -0.51 >More info EtOH 24h 24hr Original data GEO bulk
71 cdpk6-yfp 0.13 >More info 0.59 >More info Kan seedlings Original data GEO bulk
72 Col-0 DCA 6d -0.17 >More info -0.53 >More info Col-0 MOCK 6d Original data GEO bulk
73 hrpA fliC 7h -0.15 >More info -0.55 >More info Mock 7h hrpA fliC Original data GEO bulk
74 Col BTH 0.02 >More info 0.67 >More info Col rosettes Original data GEO bulk
75 seed germinating in countinuous light 24h SL 0.01 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
76 Dark 0.11 >More info 0.57 >More info Control Original data GEO bulk
77 WT-Dry -0.08 >More info -0.60 >More info WT-CK dehydration treatment 1h Original data
78 myb61 xylem -0.10 >More info -0.56 >More info wt xylem xylem Original data GEO bulk
79 Laer pretreat GA Flg22 1h -0.05 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
80 Laer Flg22(Agrobacterium) 2h 0.11 >More info 0.54 >More info Laer Control leaf discs Original data GEO bulk
81 L2.5 mutant -0.06 >More info -0.56 >More info Wt Original data GEO bulk
82 IAA7mII over-expressor IAA Treated -0.08 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
83 Col ozone 3h -0.07 >More info -0.53 >More info Col clean-air 3h ozone Original data GEO bulk
84 ara1/2mut 0.04 >More info 0.56 >More info Col-3 Original data GEO bulk
85 npr1-3 MOCK 48h 0.09 >More info 0.51 >More info Col-0 MOCK 48h Original data GEO bulk
86 pad4-est1b-1-doublemutant 0.05 >More info 0.53 >More info pad4-mutant developed rosette leaves Original data GEO bulk
87 opr3 JA 0.5 h -0.08 >More info -0.50 >More info opr3 0 h Original data GEO bulk
88 Red/FR Light45min -0.04 >More info 0.61 >More info FarRed Light 45min Original data Light treatments
89 FLIGHT TAGESB plate6 ROOTS 0.03 >More info -0.60 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
90 Protoplast Induced 0.00 >More info -0.56 >More info Uninduced Original data GEO bulk
91 IXB induced -0.06 >More info -0.50 >More info Methanol IXB Suspension cells Original data GEO bulk
92 Heat shock optimum -0.09 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
93 rdr6-15 -0.03 >More info 0.59 >More info Col-0 plant inflorescence Original data
94 ABA SA 24h -0.04 >More info -0.50 >More info EtOH 24h 24hr Original data GEO bulk
95 CCA1-ox 6am non-polysomal 0.02 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
96 myb61 cork 0.02 >More info -0.54 >More info wt cork cork Original data GEO bulk
97 NJ15 -0.09 >More info 0.61 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
98 flu dark 8hours/30 minute light -0.01 >More info -0.50 >More info col dark 8hours/30 minute light Original data GEO bulk
99 atm3 0.15 >More info -0.66 >More info Col0 whole plant Original data GEO bulk
100 AFB1 0h -0.04 >More info 0.51 >More info WT 0h Leaf tissue Original data GEO bulk
101 Col0-PsmES4326-24hpi -0.14 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
102 siliques AtHb1 control -0.06 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
103 seedling -S Exp -0.12 >More info 0.58 >More info seedling FN Exp seedling Original data
104 Leafminer damaged seedlings -0.33 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk