4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Genotoxic Stress 3 h (shoot)
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List of experiments correlated with "Genotoxic Stress 3 h (shoot)"  Help Download transcriptome of top 30
Score Experiment Correlation from
Genotoxic Stress 3 h (shoot)		 Correlation to
Genotoxic Stress 3 h (shoot)		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Genotoxic Stress 3 h (shoot) 1.00 >More info 1.00 >More info Stress mock 3 h (shoot) Original data Stress treatments
2 atm3 -0.85 >More info -0.83 >More info Col0 whole plant Original data GEO bulk
3 seedling 1.5h after Gamma WT 0.83 >More info 0.64 >More info seedling day 1 unirradiated WT 1.5h Original data
4 seedling 24h after HZE WT 0.85 >More info 0.59 >More info seedling day 2 unirradiated WT 24h Original data
5 Oxidative Stress 3 h (shoot) 0.56 >More info 0.79 >More info Stress mock 3 h (shoot) Original data Stress treatments
6 seedling 3h after Gamma WT 0.81 >More info 0.53 >More info seedling day 1 unirradiated WT 3h Original data
7 irradiated leaf (WT 1d) 0.76 >More info 0.53 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
8 Genotoxic Stress 3 h (root) 0.80 >More info 0.47 >More info Stress mock 3 h (root) Original data Stress treatments
9 irradiated leaf (cmt 1d) 0.77 >More info 0.47 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
10 seedling 24h after HZE atm-1 0.67 >More info 0.49 >More info seedling day 2 unirradiated atm-1 24h Original data
11 ABA JA 24h -0.45 >More info -0.64 >More info EtOH 24h 24hr Original data GEO bulk
12 Kas -Fe 24h Shoots 0.65 >More info 0.43 >More info Kas +Fe 24h Shoots Original data GEO bulk
13 tt4 UV -0.44 >More info -0.62 >More info UV aerial region Original data GEO bulk
14 root longitudinal zone-1 low sulfur 0.58 >More info 0.47 >More info root longitudinal zone-1 pH 5.7 Original data GEO bulk
15 control leaf (cmt 5d) -0.59 >More info -0.44 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
16 bZIP1ko mutant N+Light+ -0.48 >More info -0.54 >More info WT-sib N+Light+ whole plant Original data GEO bulk
17 seedling 1.5h after Gamma atm-1 0.69 >More info 0.32 >More info seedling day 1 unirradiated atm-1 1.5h Original data
18 csn5 (csn5a-2 csn5b) dark 0.69 >More info 0.31 >More info WT dark Original data GEO bulk
19 root stele -S 0.60 >More info 0.40 >More info root stele pH5.7 Original data GEO bulk
20 csn4-1 mutant 0.70 >More info 0.29 >More info WT dark Original data GEO bulk
21 seedling 24h after Gamma WT 0.67 >More info 0.32 >More info seedling day 2 unirradiated WT 24h Original data
22 csn3-1 dark 0.69 >More info 0.30 >More info WT dark Original data GEO bulk
23 pil5 red light 0.72 >More info 0.26 >More info Col-0 red light Original data GEO bulk
24 seedling 24h after Gamma atm-1 0.61 >More info 0.37 >More info seedling day 2 unirradiated atm-1 24h Original data
25 Pseudomonas -0.32 >More info -0.66 >More info Control pseudomonas treated whole seedling Original data GEO bulk
26 Kas -Fe 48h Shoots 0.60 >More info 0.36 >More info Kas +Fe 24h Shoots Original data GEO bulk
27 shl-2 Pool -0.41 >More info -0.55 >More info Ler Pool seedling Original data GEO bulk
28 essp3/brm5 mutant 0.56 >More info 0.39 >More info WT (Pro-beta-CG;GUS) Original data GEO bulk
29 rosette leaves fdh -0.40 >More info -0.54 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
30 seedling 6h after Gamma WT 0.80 >More info 0.13 >More info seedling day 1 unirradiated WT 6h Original data
31 WT zebularine 5d 0.73 >More info 0.20 >More info WT mock 5d shoot apical meristem Original data
32 shoot control p35S -0.34 >More info -0.59 >More info shoot control total Original data GEO bulk
33 ABA SA 24h -0.39 >More info -0.53 >More info EtOH 24h 24hr Original data GEO bulk
34 dark +H2O2 0.50 >More info 0.41 >More info dark 5 mM H2O2 seedling Original data GEO bulk
35 pil5 dark 0.72 >More info 0.19 >More info Col-0 dark Original data GEO bulk
36 aerial organ callus inducing medium 12 h -0.41 >More info -0.50 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
37 E2Fa-Dpa 0.77 >More info 0.13 >More info WT Original data GEO bulk
38 Shoot apex inflorescence (after bolting) 0.25 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
39 root - 08% oxygen - 2h -0.30 >More info -0.59 >More info root - 21% oxygen - 2h Original data GEO bulk
40 csn5 (csn5a-2 csn5b) light 0.66 >More info 0.22 >More info WT light Original data GEO bulk
41 embryo proper pre-globular 0.51 >More info 0.37 >More info whole seed sections pre-globular Original data GEO bulk
42 agb1 -ABA LF -0.24 >More info -0.64 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
43 PRR5-VP 12h light on 0.56 >More info 0.31 >More info WT 12h light on whole plant Original data GEO bulk
44 esd7-1 0.58 >More info 0.28 >More info Ler seedlings Original data GEO bulk
45 COL-0-Fe--shoot 0.50 >More info 0.35 >More info COL-0-Ctrl--shoot shoot Original data
46 GiantCell Root 0.64 >More info 0.20 >More info Control Root laser captured giant cells Original data GEO bulk
47 csn3-1 light 0.68 >More info 0.16 >More info WT light Original data GEO bulk
48 8h-DC3000 avrRpm1 -0.33 >More info -0.51 >More info 8h-DC3000 leaves Original data GEO bulk
49 seed germinating in countinuous light 24h SL 0.16 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
50 seedling 3h after HZE WT 0.80 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
51 SCR-GR Time 1H Dex -0.30 >More info -0.51 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
52 BLM 0.72 >More info 0.09 >More info CK BLM seedling Original data
53 Shoot submergence 24h -0.25 >More info -0.55 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
54 Kas2 roots 2hr KCl control 0.57 >More info 0.23 >More info Col0 roots 2hr KCl control root Original data GEO bulk
55 miR396b overexpressor -0.55 >More info -0.24 >More info Col-0 vegetative apices together with the leaf primordia Original data
56 WT mitomycin C 0.65 >More info 0.14 >More info WT mock shoot apical meristem Original data
57 seedling 1.5h after HZE WT 0.82 >More info -0.04 >More info seedling day 1 unirradiated WT 1.5h Original data
58 sicy-192 cotyledons 0.70 >More info 0.07 >More info WT cotyledons cotyledons Original data
59 bri1-116 0.04 >More info 0.73 >More info Col seedling Original data GEO bulk
60 mbd11 mutant thaliana 10-day-old seedling -0.27 >More info -0.50 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
61 Indigo Carmine 0.5 uM -0.25 >More info -0.51 >More info Control MV and IC Indigo Carmine Original data
62 35S:GIF -0.08 >More info -0.68 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
63 seedling 6h after HZE WT 0.76 >More info -0.01 >More info seedling day 1 unirradiated WT 6h Original data
64 WT zebularine 0.54 >More info 0.21 >More info WT mock shoot apical meristem Original data
65 UV 0.56 >More info 0.19 >More info WT aerial region Original data GEO bulk
66 nas4x leaves - Fe -0.63 >More info -0.12 >More info WT leaves - Fe Leaves Original data GEO bulk
67 siliques AtHb1 control 0.23 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
68 Heat shock optimum 0.10 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
69 Shoot dark control 7h -0.18 >More info -0.55 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
70 Laer pretreat GA Flg22 1h 0.00 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
71 leaf blade in D -0.21 >More info -0.50 >More info leaf blade in WL leaf blades Original data GEO bulk
72 Inflorescences Trp1 0.56 >More info 0.14 >More info Inflorescences ler inflorescences Original data GEO bulk
73 apum23 0.66 >More info 0.04 >More info WT (Col-3) aerial parts Original data GEO bulk
74 irradiated leaf (WT 5d) 0.53 >More info 0.17 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
75 BLM+INA 0.71 >More info -0.01 >More info CK BLM and INA seedling Original data
76 sfr3 cold 0.01 >More info -0.71 >More info WT cold All aerial tissue Original data GEO bulk
77 sfr2 control 0.20 >More info 0.50 >More info WT control All aerial tissue Original data GEO bulk
78 Shoot dark control 24h -0.16 >More info -0.53 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
79 WT leaves - Fe 0.67 >More info 0.01 >More info WT leaves + Fe Leaves Original data GEO bulk
80 seedling 12h after HZE WT 0.71 >More info -0.03 >More info seedling day 1 unirradiated WT 12h Original data
81 seu-3 ant-1 -0.50 >More info -0.15 >More info Col-0 Original data GEO bulk
82 Mutant clv3-7(shoot apex) 0.59 >More info 0.06 >More info Shoot apex inflorescence (after bolting) Original data Developmental series; organs / tissues at different ages
83 sfr6 cold -0.11 >More info -0.53 >More info WT cold All aerial tissue Original data GEO bulk
84 Col BTH -0.04 >More info 0.67 >More info Col rosettes Original data GEO bulk
85 endosperm paclobutrazol 0.57 >More info 0.06 >More info endosperm-control paclobutrazol endosperm Original data GEO bulk
86 csn4-1 dark 0.56 >More info 0.06 >More info WT light Original data GEO bulk
87 pepr1-1 Pepr2-3 +Pep2 10h 0.57 >More info 0.05 >More info WT +Pep2 10h Pep2 Original data GEO bulk
88 scrm-D:mute 0.57 >More info 0.05 >More info Col-0 WT whole seedling Original data GEO bulk
89 M6PR transgenic leaf 0mM NaCl -0.06 >More info -0.54 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
90 sex1-3 -0.05 >More info -0.55 >More info Col-WT leaves Original data GEO bulk
91 gis5 seedlings 0.55 >More info 0.03 >More info WT seedlings Whole seedlings (leaves + roots) Original data
92 embryo proper heart stage 0.50 >More info 0.08 >More info Control for tissue data embryo proper captured by LCM Original data GEO bulk
93 PRR5-VP 18h light on 0.50 >More info 0.08 >More info WT 18h light on whole plant Original data GEO bulk
94 max3GR24 (1 uM) 0.07 >More info 0.50 >More info max3 seedlings DMSO (mock) whole seedlings Original data GEO bulk
95 seedling 12h after Gamma WT 0.69 >More info -0.12 >More info seedling day 1 unirradiated WT 12h Original data
96 bZIP1ko mutant N-Light- 0.56 >More info 0.00 >More info WT-sib N-Light- whole plant Original data GEO bulk
97 Mock pft1 leaf 0.54 >More info 0.02 >More info Mock Col-0 leaf water leaf Original data GEO bulk
98 PRR5-VP 6h light on 0.54 >More info 0.01 >More info WT 6h light on whole plant Original data GEO bulk
99 seedlings +5AC 0.58 >More info -0.06 >More info control seedlings 10-day old whole seedling Original data GEO bulk
100 irradiated leaf (cmt 5d) 0.52 >More info -0.01 >More info control leaf (cmt 5d) rosette leaf only Original data GEO bulk
101 miR mutant (higher order mutant) 0.56 >More info -0.07 >More info col control (higher order mutant) Original data GEO bulk
102 toc1-1-77hr 0.05 >More info -0.54 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
103 seedling 6h after Gamma atm-1 0.62 >More info -0.13 >More info seedling day 1 unirradiated atm-1 6h Original data
104 protoplasts T1 [flg22] -0.52 >More info 0.03 >More info protoplasts T1 [CPK] mesophyll protoplasts Original data GEO bulk
105 root - 08% oxygen - 30min 0.06 >More info -0.54 >More info root - 21% oxygen - 30min Original data GEO bulk
106 seedling 12h after Gamma atm-1 0.64 >More info -0.17 >More info seedling day 1 unirradiated atm-1 12h Original data
107 sid2 0.04 >More info -0.50 >More info Col rosettes Original data GEO bulk
108 Col0-PsmES4326-24hpi -0.17 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
109 IAA7mII over-expressor IAA Treated -0.27 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
110 t-zeatin 0.5 h -0.09 >More info 0.50 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
111 MYB29 OE 0.51 >More info -0.11 >More info WT for MYB29/76 Original data GEO bulk
112 Polysomal RNA 35S:AtCSP1-FH1 0.12 >More info -0.52 >More info Polysomal RNA csp1 12h non-stress rosettes Original data GEO bulk
113 CCA1-ox 6am non-polysomal -0.13 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
114 24h light (+Lincomycin) 0.56 >More info -0.21 >More info 24h light (-Lincomycin) seedlings Original data GEO bulk
115 seedling 12h after HZE atm-1 0.59 >More info -0.29 >More info seedling day 1 unirradiated atm-1 12h Original data
116 cat2-2; 8h switch to ambient CO2 concentrations; 0.26 >More info -0.55 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
117 Leafminer damaged seedlings -0.33 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
118 GO5; harvested 8h continiously maintained in high
CO2;		 0.58 >More info -0.38 >More info WT; harvested 8h continiously maintained in high
CO2;		 2 whole rosettes Original data
119 6h volatiles Sm. R3089 0.33 >More info -0.52 >More info 6h untreated whole seedling Original data GEO bulk