ID | C0075 |
Compound name | dGDP |
External link | http://pmn.plantcyc.org/ARA/NEW-IMAGE?type=COMPOUND&object=DGDP |
Pathway Information | purine nucleotide metabolism (phosphotransfer and nucleotide modification) |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G71770 | poly(A)-binding protein 5 | poly(A)-binding protein 5 | -0.86 | 0.46 | -0.47 | ||
2 | AT3G22250 | UDP-Glycosyltransferase superfamily protein | 0.81 | 0.48 | -0.44 | |||
3 | AT2G04070 | MATE efflux family protein | -0.81 | 0.42 | -0.44 | |||
4 | AT1G02550 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
0.79 | 0.43 | -0.42 | |||
5 | AT2G34840 | Coatomer epsilon subunit | 0.79 | 0.48 | -0.43 | |||
6 | AT3G10990 | F-box associated ubiquitination effector family protein | 0.79 | 0.44 | -0.45 | |||
7 | AT5G08130 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
BIM1 | 0.76 | 0.47 | -0.46 | ||
8 | AT3G61840 | Protein of unknown function (DUF688) | 0.76 | 0.42 | -0.47 | |||
9 | AT3G43660 | Vacuolar iron transporter (VIT) family protein | -0.76 | 0.44 | -0.43 | |||
10 | AT3G25160 | ER lumen protein retaining receptor family protein | 0.74 | 0.45 | -0.43 | |||
11 | AT3G57210 | Protein of unknown function (DUF626) | -0.74 | 0.43 | -0.46 | |||
12 | AT4G24020 | NIN like protein 7 | NIN like protein 7 | 0.74 | 0.47 | -0.41 | ||
13 | AT1G61210 | Transducin/WD40 repeat-like superfamily protein | DWD hypersensitive to ABA 3 | 0.73 | 0.42 | -0.41 | ||
14 | AT2G06700 | transposable element gene | 0.72 | 0.44 | -0.46 | |||
15 | AT5G10220 | annexin 6 | annexin 6, ANNEXIN ARABIDOPSIS THALIANA 6 |
-0.72 | 0.49 | -0.48 | ||
16 | AT4G01910 | Cysteine/Histidine-rich C1 domain family protein | 0.72 | 0.43 | -0.41 | |||
17 | AT4G03930 | Plant invertase/pectin methylesterase inhibitor superfamily | 0.72 | 0.48 | -0.46 | |||
18 | AT5G67350 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.72 | 0.44 | -0.44 | |||
19 | AT5G55370 | MBOAT (membrane bound O-acyl transferase) family protein | -0.71 | 0.47 | -0.45 | |||
20 | AT3G17980 | Calcium-dependent lipid-binding (CaLB domain) family protein |
Arabidopsis thaliana C2 domain, C2 domain |
0.71 | 0.45 | -0.44 | ||
21 | AT4G32120 | Galactosyltransferase family protein | -0.71 | 0.41 | -0.42 | |||
22 | AT5G45260 | Disease resistance protein (TIR-NBS-LRR class) | ARABIDOPSIS THALIANA WRKY DOMAIN PROTEIN 52, RESISTANT TO RALSTONIA SOLANACEARUM 1, SENSITIVE TO LOW HUMIDITY 1 |
0.71 | 0.45 | -0.43 | ||
23 | AT3G48710 | DEK domain-containing chromatin associated protein | 0.71 | 0.48 | -0.45 | |||
24 | AT5G18360 | Disease resistance protein (TIR-NBS-LRR class) family | 0.71 | 0.43 | -0.44 | |||
25 | AT3G14030 | F-box associated ubiquitination effector family protein | 0.71 | 0.42 | -0.44 | |||
26 | AT5G44700 | Leucine-rich repeat transmembrane protein kinase | EMBRYO SAC DEVELOPMENT ARREST 23, GASSHO 2 |
-0.7 | 0.45 | -0.45 | ||
27 | AT4G08650 | transposable element gene | 0.7 | 0.45 | -0.43 | |||
28 | AT5G19200 | NAD(P)-binding Rossmann-fold superfamily protein | TSC10B | 0.7 | 0.43 | -0.42 | ||
29 | AT5G62070 | IQ-domain 23 | IQ-domain 23 | -0.7 | 0.42 | -0.44 | ||
30 | AT3G01700 | arabinogalactan protein 11 | arabinogalactan protein 11, ARABINOGALACTAN PROTEIN 11 |
-0.7 | 0.47 | -0.45 | ||
31 | AT1G63810 | CONTAINS InterPro DOMAIN/s: Nrap protein (InterPro:IPR005554); Has 396 Blast hits to 382 proteins in 182 species: Archae - 3; Bacteria - 2; Metazoa - 142; Fungi - 146; Plants - 43; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink). |
-0.69 | 0.46 | -0.46 | |||
32 | AT1G19200 | Protein of unknown function (DUF581) | 0.69 | 0.45 | -0.45 | |||
33 | AT5G23640 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.69 | 0.49 | -0.43 | |||
34 | AT4G08890 | transposable element gene | -0.69 | 0.42 | -0.46 | |||
35 | AT3G32100 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.69 | 0.44 | -0.44 | |||
36 | AT2G43280 | Far-red impaired responsive (FAR1) family protein | -0.69 | 0.45 | -0.44 | |||
37 | AT3G54010 | FKBP-type peptidyl-prolyl cis-trans isomerase family protein |
DEI1, PASTICCINO 1 | 0.69 | 0.44 | -0.43 | ||
38 | AT5G40430 | myb domain protein 22 | myb domain protein 22, myb domain protein 22 |
-0.69 | 0.47 | -0.47 | ||
39 | AT3G44250 | cytochrome P450, family 71, subfamily B, polypeptide 38 | cytochrome P450, family 71, subfamily B, polypeptide 38 |
-0.68 | 0.46 | -0.45 | ||
40 | AT5G05700 | arginine-tRNA protein transferase 1 | ATATE1, arginine-tRNA protein transferase 1, DELAYED LEAF SENESCENCE 1 |
0.68 | 0.44 | -0.46 | ||
41 | AT4G13190 | Protein kinase superfamily protein | -0.68 | 0.43 | -0.45 | |||
42 | AT5G03590 | GDSL-like Lipase/Acylhydrolase superfamily protein | -0.68 | 0.46 | -0.44 | |||
43 | AT1G22080 | Cysteine proteinases superfamily protein | 0.68 | 0.45 | -0.45 | |||
44 | AT5G49440 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.68 | 0.43 | -0.46 | |||
45 | AT5G22875 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.68 | 0.45 | -0.42 | |||
46 | AT1G49840 | Protein of unknown function (DUF620) | -0.68 | 0.45 | -0.46 | |||
47 | AT2G40300 | ferritin 4 | ferritin 4, ferritin 4 | -0.68 | 0.46 | -0.45 | ||
48 | AT5G65160 | tetratricopeptide repeat (TPR)-containing protein | tetratricopeptide repeat 14 | 0.67 | 0.46 | -0.46 | ||
49 | AT1G50400 | Eukaryotic porin family protein | -0.67 | 0.44 | -0.43 | |||
50 | AT1G31430 | Pentatricopeptide repeat (PPR-like) superfamily protein | -0.67 | 0.43 | -0.45 | |||
51 | AT4G16460 | unknown protein; Has 58 Blast hits to 58 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 30; Fungi - 4; Plants - 16; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). |
0.67 | 0.45 | -0.44 | |||
52 | AT3G56270 | Plant protein of unknown function (DUF827) | 0.66 | 0.44 | -0.45 | |||
53 | AT1G33220 | Glycosyl hydrolase superfamily protein | 0.66 | 0.44 | -0.43 | |||
54 | AT5G56160 | Sec14p-like phosphatidylinositol transfer family protein | 0.66 | 0.4 | -0.45 | |||
55 | AT2G21800 | essential meiotic endonuclease 1A | essential meiotic endonuclease 1A, EME1A, essential meiotic endonuclease 1A |
-0.66 | 0.43 | -0.45 | ||
56 | AT3G13228 | RING/U-box superfamily protein | 0.66 | 0.46 | -0.44 | |||
57 | AT3G48700 | carboxyesterase 13 | carboxyesterase 13, carboxyesterase 13 |
-0.66 | 0.45 | -0.45 | ||
58 | AT4G22800 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.66 | 0.45 | -0.45 | |||
59 | AT1G32670 | unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.66 | 0.46 | -0.42 | |||
60 | AT5G16150 | plastidic GLC translocator | GLUCOSE TRANSPORTER 1, plastidic GLC translocator |
0.66 | 0.41 | -0.44 | ||
61 | AT1G12230 | Aldolase superfamily protein | 0.66 | 0.44 | -0.43 | |||
62 | AT1G05030 | Major facilitator superfamily protein | 0.66 | 0.44 | -0.45 | |||
63 | AT1G21290 | transposable element gene | -0.66 | 0.46 | -0.44 | |||
64 | AT5G14510 | ARM repeat superfamily protein | 0.66 | 0.44 | -0.44 | |||
65 | AT1G73050 | Glucose-methanol-choline (GMC) oxidoreductase family protein |
0.66 | 0.48 | -0.48 | |||
66 | AT4G25200 | mitochondrion-localized small heat shock protein 23.6 | mitochondrion-localized small heat shock protein 23.6, mitochondrion-localized small heat shock protein 23.6 |
-0.66 | 0.42 | -0.43 | ||
67 | AT3G46580 | methyl-CPG-binding domain protein 5 | ATMBD5, METHYL-CPG-BINDING DOMAIN PROTEIN 05, methyl-CPG-binding domain protein 5 |
0.65 | 0.45 | -0.44 | ||
68 | AT3G06433 | pseudogene of nodulin MtN3 family protein | 0.65 | 0.45 | -0.47 | |||
69 | AT3G25600 | Calcium-binding EF-hand family protein | -0.65 | 0.45 | -0.43 | |||
70 | AT3G44950 | glycine-rich protein | 0.65 | 0.4 | -0.43 | |||
71 | AT3G42550 | Eukaryotic aspartyl protease family protein | 0.65 | 0.42 | -0.44 | |||
72 | AT3G58540 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06190.2); Has 6 Blast hits to 6 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.65 | 0.43 | -0.44 | |||
73 | AT2G16960 | ARM repeat superfamily protein | 0.65 | 0.46 | -0.41 | |||
74 | AT4G38940 | Galactose oxidase/kelch repeat superfamily protein | -0.65 | 0.45 | -0.46 | |||
75 | AT3G42780 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G09130.1); Has 5 Blast hits to 5 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.65 | 0.44 | -0.44 | |||
76 | AT2G13730 | transposable element gene | -0.65 | 0.41 | -0.44 | |||
77 | AT1G55915 | zinc ion binding | -0.64 | 0.44 | -0.42 | |||
78 | AT2G10465 | transposable element gene | 0.64 | 0.45 | -0.44 | |||
79 | AT5G52690 | Copper transport protein family | 0.64 | 0.45 | -0.41 | |||
80 | AT1G10000 | Ribonuclease H-like superfamily protein | 0.64 | 0.45 | -0.45 | |||
81 | AT3G22480 | prefoldin 2 | prefoldin 2 | -0.64 | 0.46 | -0.43 | ||
82 | AT3G43840 | 3-oxo-5-alpha-steroid 4-dehydrogenase family protein | -0.64 | 0.43 | -0.45 | |||
83 | AT5G13740 | zinc induced facilitator 1 | zinc induced facilitator 1 | 0.64 | 0.43 | -0.41 | ||
84 | AT1G20520 | Arabidopsis protein of unknown function (DUF241) | 0.64 | 0.44 | -0.44 | |||
85 | AT3G18650 | AGAMOUS-like 103 | AGAMOUS-like 103 | 0.64 | 0.42 | -0.44 | ||
86 | AT3G55550 | Concanavalin A-like lectin protein kinase family protein | -0.64 | 0.41 | -0.44 | |||
87 | AT2G07300 | transposable element gene | -0.63 | 0.46 | -0.44 | |||
88 | AT4G05370 | BCS1 AAA-type ATPase | -0.63 | 0.43 | -0.44 | |||
89 | AT5G51580 | unknown protein; Has 8 Blast hits to 6 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
-0.63 | 0.44 | -0.44 | |||
90 | AT1G16950 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: stamen; EXPRESSED DURING: 4 anthesis; Has 17 Blast hits to 17 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.63 | 0.48 | -0.48 | |||
91 | AT5G47360 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.63 | 0.45 | -0.44 | |||
92 | AT3G42900 | transposable element gene | -0.63 | 0.43 | -0.45 | |||
93 | AT3G47000 | Glycosyl hydrolase family protein | 0.63 | 0.43 | -0.43 | |||
94 | AT1G13130 | Cellulase (glycosyl hydrolase family 5) protein | -0.63 | 0.46 | -0.44 | |||
95 | AT5G14380 | arabinogalactan protein 6 | arabinogalactan protein 6 | 0.63 | 0.45 | -0.45 | ||
96 | AT2G17710 | unknown protein; Has 39 Blast hits to 39 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.62 | 0.45 | -0.46 | |||
97 | AT4G33160 | F-box family protein | -0.62 | 0.43 | -0.44 | |||
98 | AT1G08370 | decapping 1 | ATDCP1, decapping 1 | -0.62 | 0.47 | -0.43 | ||
99 | AT4G21650 | Subtilase family protein | 0.62 | 0.45 | -0.45 | |||
100 | AT2G19510 | LOB domain-containing protein 8 | LOB domain-containing protein 8 | 0.62 | 0.45 | -0.47 | ||
101 | AT1G06970 | cation/hydrogen exchanger 14 | ATCHX14, cation/hydrogen exchanger 14 |
-0.62 | 0.46 | -0.42 | ||
102 | AT5G35510 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.62 | 0.42 | -0.44 | |||
103 | AT5G54950 | Aconitase family protein | -0.62 | 0.47 | -0.5 | |||
104 | AT1G63600 | Receptor-like protein kinase-related family protein | 0.62 | 0.44 | -0.48 | |||
105 | AT5G34790 | transposable element gene | -0.62 | 0.42 | -0.43 | |||
106 | AT1G47940 | Pentatricopeptide repeat (PPR) superfamily protein | -0.62 | 0.45 | -0.42 | |||
107 | AT2G30300 | Major facilitator superfamily protein | 0.62 | 0.44 | -0.47 | |||
108 | AT3G52690 | RNI-like superfamily protein | -0.62 | 0.42 | -0.45 | |||
109 | AT1G43980 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.62 | 0.42 | -0.44 | |||
110 | AT5G38040 | UDP-Glycosyltransferase superfamily protein | 0.62 | 0.45 | -0.45 | |||
111 | AT1G70000 | myb-like transcription factor family protein | -0.61 | 0.47 | -0.44 | |||
112 | AT3G44760 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root, flower; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF626) (TAIR:AT3G44770.1); Has 9 Blast hits to 9 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.61 | 0.45 | -0.44 | |||
113 | AT1G77440 | 20S proteasome beta subunit C2 | 20S proteasome beta subunit C2 | -0.61 | 0.44 | -0.45 | ||
114 | AT1G47660 | unknown protein; Has 5165 Blast hits to 2753 proteins in 450 species: Archae - 12; Bacteria - 1193; Metazoa - 731; Fungi - 361; Plants - 761; Viruses - 176; Other Eukaryotes - 1931 (source: NCBI BLink). |
-0.61 | 0.44 | -0.45 | |||
115 | AT1G06710 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.6 | 0.42 | -0.45 | |||
116 | AT1G60995 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Membralin (InterPro:IPR019144); Has 172 Blast hits to 170 proteins in 70 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). |
-0.6 | 0.45 | -0.44 | |||
117 | AT2G20150 | unknown protein; Has 5 Blast hits to 5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.6 | 0.46 | -0.46 | |||
118 | AT2G35670 | VEFS-Box of polycomb protein | FERTILIZATION-INDEPENDENT ENDOSPERM 2, FERTILIZATION INDEPENDENT SEED 2 |
-0.6 | 0.45 | -0.42 | ||
119 | AT4G33390 | Plant protein of unknown function (DUF827) | -0.6 | 0.44 | -0.41 | |||
120 | AT2G04520 | Nucleic acid-binding, OB-fold-like protein | -0.6 | 0.43 | -0.46 | |||
121 | AT1G30110 | nudix hydrolase homolog 25 | nudix hydrolase homolog 25, nudix hydrolase homolog 25 |
-0.6 | 0.42 | -0.44 | ||
122 | AT4G24890 | purple acid phosphatase 24 | ARABIDOPSIS THALIANA PURPLE ACID PHOSPHATASE 24, purple acid phosphatase 24 |
-0.6 | 0.46 | -0.45 | ||
123 | AT1G60030 | nucleobase-ascorbate transporter 7 | ARABIDOPSIS NUCLEOBASE-ASCORBATE TRANSPORTER 7, nucleobase-ascorbate transporter 7 |
-0.6 | 0.44 | -0.44 | ||
124 | AT1G09240 | nicotianamine synthase 3 | ARABIDOPSIS THALIANA NICOTIANAMINE SYNTHASE 3, nicotianamine synthase 3 |
-0.59 | 0.47 | -0.46 | ||
125 | AT5G16850 | telomerase reverse transcriptase | telomerase reverse transcriptase, telomerase reverse transcriptase |
-0.59 | 0.47 | -0.46 | ||
126 | AT5G51720 | 2 iron, 2 sulfur cluster binding | -0.59 | 0.43 | -0.46 | |||
127 | AT1G49150 | unknown protein; Has 6 Blast hits to 6 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.59 | 0.47 | -0.45 | |||
128 | AT3G49000 | RNA polymerase III subunit RPC82 family protein | -0.59 | 0.46 | -0.41 | |||
129 | AT3G42360 | transposable element gene | -0.59 | 0.47 | -0.44 | |||
130 | AT3G19740 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.59 | 0.44 | -0.47 | |||
131 | AT1G31100 | transposable element gene | -0.59 | 0.42 | -0.45 | |||
132 | AT2G32280 | Protein of unknown function (DUF1218) | -0.59 | 0.42 | -0.48 | |||
133 | AT4G35090 | catalase 2 | catalase 2 | -0.58 | 0.44 | -0.42 | ||
134 | AT5G48750 | Cytochrome b561/ferric reductase transmembrane with DOMON related domain |
-0.58 | 0.46 | -0.44 | |||
135 | AT5G24850 | cryptochrome 3 | cryptochrome 3 | -0.58 | 0.44 | -0.48 | ||
136 | AT4G28460 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; Has 8 Blast hits to 8 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.58 | 0.44 | -0.45 | |||
137 | AT1G20500 | AMP-dependent synthetase and ligase family protein | -0.58 | 0.45 | -0.48 | |||
138 | AT1G05410 | Protein of unknown function (DUF1423) | -0.58 | 0.44 | -0.45 | |||
139 | AT2G36885 | unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 172 Blast hits to 172 proteins in 58 species: Archae - 0; Bacteria - 116; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink). |
-0.58 | 0.44 | -0.42 | |||
140 | AT2G20680 | Glycosyl hydrolase superfamily protein | AtMAN2, endo-beta-mannase 2 | -0.58 | 0.45 | -0.44 | ||
141 | AT5G24280 | gamma-irradiation and mitomycin c induced 1 | GAMMA-IRRADIATION AND MITOMYCIN C INDUCED 1 |
-0.58 | 0.48 | -0.43 | ||
142 | AT5G01600 | ferretin 1 | ARABIDOPSIS THALIANA FERRETIN 1, ferretin 1 |
-0.58 | 0.48 | -0.43 | ||
143 | AT5G35230 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.58 | 0.46 | -0.47 | |||
144 | AT1G73700 | MATE efflux family protein | -0.57 | 0.45 | -0.44 | |||
145 | AT2G37010 | non-intrinsic ABC protein 12 | non-intrinsic ABC protein 12, non-intrinsic ABC protein 12 |
-0.57 | 0.44 | -0.45 | ||
146 | AT1G69350 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.57 | 0.42 | -0.46 | |||
147 | AT2G41010 | calmodulin (CAM)-binding protein of 25 kDa | calmodulin (CAM)-binding protein of 25 kDa, calmodulin (CAM)-binding protein of 25 kDa |
-0.57 | 0.48 | -0.42 | ||
148 | AT2G11240 | transposable element gene | -0.57 | 0.47 | -0.45 | |||
149 | AT4G39200 | Ribosomal protein S25 family protein | -0.57 | 0.46 | -0.44 | |||
150 | AT3G18670 | Ankyrin repeat family protein | -0.57 | 0.45 | -0.48 | |||
151 | AT5G51630 | Disease resistance protein (TIR-NBS-LRR class) family | -0.57 | 0.43 | -0.42 | |||
152 | AT3G61630 | cytokinin response factor 6 | cytokinin response factor 6 | -0.57 | 0.45 | -0.43 | ||
153 | AT5G35430 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.57 | 0.42 | -0.41 | |||
154 | AT5G59130 | Subtilase family protein | -0.57 | 0.45 | -0.43 | |||
155 | AT1G73660 | protein tyrosine kinase family protein | -0.57 | 0.44 | -0.44 | |||
156 | AT2G20430 | ROP-interactive CRIB motif-containing protein 6 | ROP-interactive CRIB motif-containing protein 6 |
-0.57 | 0.44 | -0.45 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
157 | C0075 | dGDP | - | dGDP | purine nucleotide metabolism (phosphotransfer and nucleotide modification) | 1 | 0.43 | -0.41 | ||
158 | C0091 | Fructose-1,6-bisphosphate | D-Fructose-1,6-bisphosphate | Fructose-1,6-bisphosphate | gluconeogenesis I, Calvin-Benson-Bassham cycle, glycolysis IV (plant cytosol), glycolysis I, CA1P biosynthesis, sucrose biosynthesis I |
0.94 | 0.41 | -0.45 | ||
159 | C0262 | UDP-glucuronic acid | - | UDP-D-glucuronate | xylan biosynthesis, UDP-D-glucuronate biosynthesis (from myo-inositol), UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate), UDP-D-apiose biosynthesis (from UDP-D-glucuronate), galactose degradation III, UDP-D-xylose and UDP-D-glucuronate biosynthesis |
0.88 | 0.44 | -0.45 | ||
160 | C0032 | 3-Phosphoglyceric acid | 3-Phospho-(R)-glyceric acid | 3-Phosphoglycerate | glycolysis I, gluconeogenesis I, Calvin-Benson-Bassham cycle, sucrose biosynthesis I, serine biosynthesis, photorespiration, Rubisco shunt, glycolysis IV (plant cytosol) |
0.88 | 0.42 | -0.43 | ||
161 | C0261 | UDP-glucose | - | UDP-D-glucose | quercetin glucoside biosynthesis (Arabidopsis), abscisic acid glucose ester biosynthesis, anthocyanin biosynthesis (delphinidin 3-O-glucoside), UDP-glucose biosynthesis (from sucrose), 2,4,6-trinitrotoluene degradation, galactose degradation I (Leloir pathway), cytokinins-O-glucoside biosynthesis, trehalose biosynthesis I, dolichyl-diphosphooligosaccharide biosynthesis, phenolic malonylglucosides biosynthesis, callose biosynthesis, superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside), glucosinolate biosynthesis from hexahomomethionine, coniferin metabolism, glucosinolate biosynthesis from phenylalanine, xyloglucan biosynthesis, glucosinolate biosynthesis from pentahomomethionine, anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside), glucosinolate biosynthesis from dihomomethionine, cellulose biosynthesis, sinapate ester biosynthesis, superpathway of IAA conjugate biosynthesis, salicylate glucosides biosynthesis IV, sucrose biosynthesis I, glucosinolate biosynthesis from trihomomethionine, tetrahydrofolate biosynthesis II, sucrose degradation III, UDP-D-xylose and UDP-D-glucuronate biosynthesis, coumarin biosynthesis (via 2-coumarate), superpathway of sucrose and starch metabolism I (non-photosynthetic tissue), monolignol glucosides biosynthesis, glucosinolate biosynthesis from homomethionine, kaempferol glucoside biosynthesis (Arabidopsis), salicylate glucosides biosynthesis III, cytokinins 7-N-glucoside biosynthesis, galactose degradation III, cytokinins 9-N-glucoside biosynthesis, glucosinolate biosynthesis from tryptophan, UDP-galactose biosynthesis, salicylate glucosides biosynthesis II, stachyose degradation, superpathway of sucrose and starch metabolism II (photosynthetic tissue), UDP-glucose biosynthesis (from glucose 6-phosphate), sphingolipid biosynthesis (plants), glucosinolate biosynthesis from tetrahomomethionine, galactose degradation II, UDP-L-rhamnose biosynthesis |
0.88 | 0.42 | -0.43 | ||
162 | C0259 | Tyramine | - | Tyramine | hydroxycinnamic acid tyramine amides biosynthesis, suberin biosynthesis |
0.85 | 0.46 | -0.46 | ||
163 | C0088 | FAD | - | FAD | cytokinins degradation, lysine degradation II, valine degradation I, isoleucine degradation I, flavin biosynthesis I (bacteria and plants) |
0.84 | 0.43 | -0.46 | ||
164 | C0061 | Aspartic acid | L-Aspartic acid | L-Aspartate | purine nucleotide metabolism (phosphotransfer and nucleotide modification), tRNA charging, indole-3-acetyl-amino acid biosynthesis, citrulline-nitric oxide cycle, asparagine degradation I, cyanide detoxification II, asparagine biosynthesis I, asparagine biosynthesis III (tRNA-dependent), arginine biosynthesis I, inosine-5'-phosphate biosynthesis II, uridine-5'-phosphate biosynthesis, aspartate biosynthesis, homoserine biosynthesis, lysine biosynthesis VI, aspartate degradation II, urea cycle, purine nucleotides de novo biosynthesis II, NAD biosynthesis I (from aspartate), IAA degradation IV, arginine biosynthesis II (acetyl cycle) |
0.81 | 0.43 | -0.44 | ||
165 | C0006 | β-Homothreonine | L-β-Homothreonine | - | - | 0.81 | 0.45 | -0.46 | ||
166 | C0218 | Pyridoxamine phosphate | Pyridoxamine-5'-phosphate | Pyridoxamine-5'-phosphate | pyridoxal 5'-phosphate salvage pathway | 0.81 | 0.41 | -0.42 | ||
167 | C0062 | Betain | - | - | - | 0.81 | 0.43 | -0.47 | ||
168 | C0056 | AMP | - | AMP | PRPP biosynthesis I, fatty acid biosynthesis (plant mitochondria), adenine and adenosine salvage VI, biotin-carboxyl carrier protein assembly, molybdenum cofactor biosynthesis II (eukaryotes), gluconeogenesis I, adenine and adenosine salvage II, asparagine biosynthesis I, L-glutamine biosynthesis II (tRNA-dependent), trans-cinnamoyl-CoA biosynthesis, IAA degradation V, ethanol degradation II (cytosol), arginine biosynthesis I, IAA degradation IV, fatty acid activation, selenate reduction, IAA biosynthesis VII, 4-hydroxybenzoate biosynthesis V, tetrapyrrole biosynthesis I, flavonoid biosynthesis, indole-3-acetyl-amino acid biosynthesis, glutamine biosynthesis III, ethanol degradation IV (peroxisomal), glycolysis I, asparagine biosynthesis III (tRNA-dependent), jasmonoyl-amino acid conjugates biosynthesis I, molybdenum cofactor biosynthesis, pyridine nucleotide cycling (plants), scopoletin biosynthesis, jasmonic acid biosynthesis, adenosine nucleotides degradation I, fatty acid beta-oxidation II (core pathway), simple coumarins biosynthesis, sulfate reduction II (assimilatory), pantothenate biosynthesis, sporopollenin precursor biosynthesis, urea cycle, thiamine biosynthesis II, starch degradation II, NAD biosynthesis I (from aspartate), citrulline-nitric oxide cycle, beta-alanine biosynthesis II, arginine biosynthesis II (acetyl cycle), suberin biosynthesis, linoleate biosynthesis I (plants), trans-zeatin biosynthesis, tetrahydrofolate biosynthesis II, purine nucleotides de novo biosynthesis II, phenylpropanoid biosynthesis, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I, purine nucleotide metabolism (phosphotransfer and nucleotide modification), tRNA charging |
0.8 | 0.46 | -0.44 | ||
169 | C0053 | ADP | - | ADP | phosphatidylcholine biosynthesis I, mannitol degradation II, lipid IVA biosynthesis, stachyose degradation, Rubisco shunt, copper transport II, glycerol degradation IV, chorismate biosynthesis, folate polyglutamylation II, galactose degradation III, D-myo-inositol (1,4,5)-trisphosphate biosynthesis, UDP-L-arabinose biosynthesis II (from L-arabinose), cadmium transport I, folate polyglutamylation, coenzyme A biosynthesis, sulfate activation for sulfonation, 1,4-dihydroxy-2-naphthoate biosynthesis II (plants), pyrimidine deoxyribonucleotides de novo biosynthesis I, galactose degradation II, inosine-5'-phosphate biosynthesis II, ribose degradation, acetyl-CoA biosynthesis (from citrate), inositol pyrophosphates biosynthesis, fatty acid biosynthesis initiation I, xylose degradation I, adenine and adenosine salvage VI, TCA cycle variation III (eukaryotic), tetrahydrofolate biosynthesis II, phosphatidylethanolamine biosynthesis II, pyridoxal 5'-phosphate salvage pathway, citrulline biosynthesis, trans-zeatin biosynthesis, glutamine biosynthesis I, arginine biosynthesis II (acetyl cycle), L-Ndelta-acetylornithine biosynthesis, mevalonate pathway I, methionine biosynthesis II, trehalose degradation II (trehalase), citrulline degradation, methionine salvage pathway, TCA cycle variation V (plant), chlorophyllide a biosynthesis I, starch degradation I, methylerythritol phosphate pathway, pyridine nucleotide cycling (plants), ceramide degradation, biotin-carboxyl carrier protein assembly, purine nucleotide metabolism (phosphotransfer and nucleotide modification), UDP-D-galacturonate biosynthesis II (from D-galacturonate), asparagine biosynthesis III (tRNA-dependent), superpathway of glyoxylate cycle and fatty acid degradation, NAD/NADH phosphorylation and dephosphorylation, 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3), galactose degradation I (Leloir pathway), uridine-5'-phosphate biosynthesis, lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3), sucrose degradation III, lysine biosynthesis VI, sphingolipid biosynthesis (plants), choline biosynthesis I, GDP-glucose biosynthesis, photorespiration, gamma-glutamyl cycle (plant pathway), 5-aminoimidazole ribonucleotide biosynthesis I, gamma-glutamyl cycle, thiamine biosynthesis II, proline biosynthesis III, glutathione biosynthesis, folate transformations II, ornithine biosynthesis, diphthamide biosynthesis, S-methyl-5'-thioadenosine degradation I, starch biosynthesis, arginine biosynthesis I, homoserine biosynthesis, flavin biosynthesis I (bacteria and plants), sucrose biosynthesis I, leucine degradation I, glycolysis I, pyrimidine ribonucleotides interconversion, 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza), glycolysis IV (plant cytosol), Calvin-Benson-Bassham cycle, UDP-D-glucuronate biosynthesis (from myo-inositol), guanine and guanosine salvage III, glutamine biosynthesis III, L-glutamine biosynthesis II (tRNA-dependent), GDP-L-fucose biosynthesis II (from L-fucose), nitrate reduction II (assimilatory), ammonia assimilation cycle II, gluconeogenesis I, threonine biosynthesis from homoserine, mannose degradation, urea cycle, lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3), biotin biosynthesis II |
0.8 | 0.45 | -0.43 | ||
170 | C0069 | Citrulline | - | Citrulline | citrulline-nitric oxide cycle, citrulline biosynthesis, nitric oxide biosynthesis I (in plants), urea cycle, citrulline degradation, arginine biosynthesis II (acetyl cycle), arginine biosynthesis I |
0.79 | 0.46 | -0.46 | ||
171 | C0113 | Histidinol | - | Histidinol | histidine biosynthesis | 0.79 | 0.45 | -0.45 | ||
172 | C0142 | Malonic acid | - | Malonate | fatty acid biosynthesis (plant mitochondria) | 0.78 | 0.44 | -0.43 | ||
173 | C0066 | Choline | - | Choline | choline biosynthesis III, phosphatidylcholine biosynthesis I, choline biosynthesis I, glycine betaine biosynthesis III (plants), choline biosynthesis II, sinapate ester biosynthesis, phospholipases |
0.78 | 0.44 | -0.44 | ||
174 | C0099 | Glucose-1-phosphate | α,β-D-Glucose-1-phosphate | α-D-Glucose-1-phosphate; β-D-Glucose-1-phosphate | galactose degradation I (Leloir pathway) | 0.78 | 0.41 | -0.45 | ||
175 | C0234 | Sinapoyl glucose | 1-O-Sinapoyl-β-D-glucose | 1-O-Sinapoyl-β-D-glucose | sinapate ester biosynthesis | 0.77 | 0.5 | -0.45 | ||
176 | C0087 | Erythrose-4-phosphate | D-Erythrose-4-phosphate | D-Erythrose-4-phosphate | Rubisco shunt, pentose phosphate pathway (non-oxidative branch), chorismate biosynthesis, Calvin-Benson-Bassham cycle |
0.77 | 0.44 | -0.44 | ||
177 | C0186 | NAD | - | NAD+ | ammonia assimilation cycle II, aspartate degradation II, adenosine nucleotides degradation I, plant sterol biosynthesis II, UDP-D-xylose and UDP-D-glucuronate biosynthesis, NAD biosynthesis I (from aspartate), ethanol degradation IV (peroxisomal), abscisic acid biosynthesis, palmitate biosynthesis II (bacteria and plants), zeaxanthin biosynthesis, sucrose degradation to ethanol and lactate (anaerobic), glutamate degradation IV, stearate biosynthesis II (plants), guanosine nucleotides degradation II, glutamate degradation I, mannitol degradation II, glycerol-3-phosphate shuttle, 2-ketoglutarate dehydrogenase complex, arginine degradation I (arginase pathway), aerobic respiration (alternative oxidase pathway), branched-chain alpha-keto acid dehydrogenase complex, 4-aminobutyrate degradation IV, glycolysis I, glycine cleavage complex, lysine degradation II, fatty acid beta-oxidation II (core pathway), nitrate reduction II (assimilatory), TCA cycle variation V (plant), leucine degradation I, thiamine biosynthesis II, acetaldehyde biosynthesis I, sorbitol degradation I, glutamine biosynthesis III, aerobic respiration (cytochrome c), ethanol degradation I, ascorbate biosynthesis I (L-galactose pathway), glycolysis IV (plant cytosol), benzoate biosynthesis II (CoA-independent, non-beta-oxidative), siroheme biosynthesis, TCA cycle variation III (eukaryotic), isoleucine degradation I, pyridine nucleotide cycling (plants), tyrosine biosynthesis I, gluconeogenesis I, glycine betaine biosynthesis III (plants), traumatin and (Z)-3-hexen-1-yl acetate biosynthesis, NAD/NADH phosphorylation and dephosphorylation, guanosine nucleotides degradation I, purine nucleotides de novo biosynthesis II, acetyl-CoA biosynthesis (from pyruvate), serine biosynthesis, photorespiration, histidine biosynthesis, glyoxylate cycle, jasmonic acid biosynthesis, alanine degradation II (to D-lactate), a ubiquinone + NADH + H+ -> a ubiquinol + NAD+, putrescine degradation IV, brassinosteroid biosynthesis III, fatty acid elongation -- saturated, pyruvate fermentation to ethanol II, beta-alanine biosynthesis II, 4-hydroxybenzoate biosynthesis V, plant sterol biosynthesis, urate biosynthesis/inosine 5'-phosphate degradation, phenylalanine degradation III, glutamate biosynthesis IV, leucine biosynthesis, fatty acid alpha-oxidation, a ubiquinone + NADH + H+ -> NAD+ + a ubiquinol, Fe(III)-reduction and Fe(II) transport, purine nucleotide metabolism (phosphotransfer and nucleotide modification), phenylethanol biosynthesis, pyruvate fermentation to lactate, superpathway of glyoxylate cycle and fatty acid degradation, fatty acid omega-oxidation, galactose degradation III, ethanol degradation II (cytosol), sucrose biosynthesis I, valine degradation I, folate transformations II |
0.77 | 0.46 | -0.44 | ||
178 | C0149 | Mevalonolactone | D,L-Mevalonolactone | - | terpenoid biosynthesis | 0.77 | 0.44 | -0.43 | ||
179 | C0005 | β-Fructose-6-phosphate | β-D-Fructose-6-phosphate | D-Fructose-6-phosphate | starch biosynthesis, Rubisco shunt, Calvin-Benson-Bassham cycle, mannitol degradation II, ascorbate biosynthesis I (L-galactose pathway), UDP-N-acetyl-D-glucosamine biosynthesis II, GDP-mannose biosynthesis, mannose degradation, sucrose biosynthesis I, sucrose degradation III, glycolysis IV (plant cytosol), pentose phosphate pathway (non-oxidative branch), glycolysis I, superpathway of sucrose and starch metabolism II (photosynthetic tissue), D-mannose degradation, gluconeogenesis I |
0.75 | 0.46 | -0.43 | ||
180 | C0026 | 2-Hydroxyisobutyric acid | - | - | β oxidation | 0.75 | 0.46 | -0.44 | ||
181 | C0140 | Lysine | L-Lysine | L-Lysine | lysine degradation II, tRNA charging, lysine biosynthesis VI, lysine degradation I |
0.75 | 0.41 | -0.47 | ||
182 | C0104 | Glutathione | - | Glutathione | glucosinolate biosynthesis from tryptophan, glutathione redox reactions I, glutathione degradation, gamma-glutamyl cycle (plant pathway), indole glucosinolate breakdown (active in intact plant cell), selenate reduction, glutathione redox reactions II, glucosinolate biosynthesis from trihomomethionine, ascorbate glutathione cycle, glucosinolate biosynthesis from pentahomomethionine, camalexin biosynthesis, glucosinolate biosynthesis from homomethionine, glucosinolate biosynthesis from phenylalanine, methylglyoxal degradation I, sulfate reduction II (assimilatory), glucosinolate biosynthesis from dihomomethionine, indole glucosinolate breakdown (insect chewing induced), glutathione biosynthesis, formaldehyde oxidation II (glutathione-dependent), glutathione-mediated detoxification II, glucosinolate biosynthesis from tetrahomomethionine, glucosinolate biosynthesis from hexahomomethionine, gamma-glutamyl cycle |
0.74 | 0.43 | -0.45 | ||
183 | C0114 | Homocystine | L-Homocystine | - | - | 0.73 | 0.44 | -0.45 | ||
184 | C0054 | Agmatine | - | Agmatine | putrescine biosynthesis I, putrescine biosynthesis II, superpathway of polyamine biosynthesis |
0.73 | 0.47 | -0.45 | ||
185 | C0030 | 3-Methylsulfinyl-n-propylglucosinolate | - | 3-Methylsulfinylpropyl-glucosinolate | glucosinolate biosynthesis from homomethionine | 0.73 | 0.46 | -0.48 | ||
186 | C0112 | Histidine | L-Histidine | L-Histidine | tRNA charging, histidine biosynthesis |
0.73 | 0.46 | -0.41 | ||
187 | C0011 | N-Acetyl-glutamic acid | N-Acetyl-D,L-glutamic acid | N-Acetyl-L-glutamate | arginine biosynthesis II (acetyl cycle), ornithine biosynthesis |
0.73 | 0.44 | -0.45 | ||
188 | C0068 | Citric acid | - | Citrate | acetyl-CoA biosynthesis (from citrate), TCA cycle variation V (plant), TCA cycle variation III (eukaryotic), glutamine biosynthesis III, glyoxylate cycle |
0.72 | 0.46 | -0.46 | ||
189 | C0022 | 1,4-Butanediamine | - | Putrescine | spermine and spermidine degradation III, putrescine degradation IV, superpathway of polyamine biosynthesis, putrescine biosynthesis II, spermidine biosynthesis I, putrescine biosynthesis I |
0.71 | 0.43 | -0.41 | ||
190 | C0058 | Arginine | D,L-Arginine | L-Arginine | arginine degradation VI (arginase 2 pathway), arginine degradation I (arginase pathway), arginine biosynthesis I, putrescine biosynthesis II, nitric oxide biosynthesis I (in plants), citrulline biosynthesis, putrescine biosynthesis I, tRNA charging, arginine biosynthesis II (acetyl cycle), citrulline-nitric oxide cycle, urea cycle, L-Ndelta-acetylornithine biosynthesis |
0.71 | 0.45 | -0.42 | ||
191 | C0027 | 2-Oxoglutaric acid | - | α-Ketoglutarate | gibberellin biosynthesis III (early C-13 hydroxylation), leucopelargonidin and leucocyanidin biosynthesis, aspartate degradation II, ornithine biosynthesis, isoleucine biosynthesis I (from threonine), pantothenate biosynthesis, phenylalanine degradation III, flavonol biosynthesis, lysine biosynthesis VI, luteolin biosynthesis, ammonia assimilation cycle II, serine biosynthesis, flavonoid biosynthesis, glutamate biosynthesis V, aspartate biosynthesis, glutamate degradation I, gibberellin inactivation I (2beta-hydroxylation), alanine degradation III, photorespiration, valine biosynthesis, glycine biosynthesis, arginine biosynthesis II (acetyl cycle), arginine degradation I (arginase pathway), gibberellin biosynthesis II (early C-3 hydroxylation), leucine biosynthesis, glutamate biosynthesis IV, tyrosine biosynthesis II, proline biosynthesis III, citrulline biosynthesis, anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside), L-Ndelta-acetylornithine biosynthesis, isoleucine degradation I, alanine biosynthesis II, tyrosine biosynthesis I, TCA cycle variation III (eukaryotic), leucine degradation I, alanine degradation II (to D-lactate), TCA cycle variation V (plant), arginine degradation VI (arginase 2 pathway), valine degradation I, gibberellin biosynthesis I (non C-3, non C-13 hydroxylation), 1,4-dihydroxy-2-naphthoate biosynthesis II (plants), 2-ketoglutarate dehydrogenase complex, glutamate degradation IV, tyrosine degradation I, anthocyanin biosynthesis (delphinidin 3-O-glucoside), IAA biosynthesis I, phenylalanine biosynthesis II, lysine degradation II, scopoletin biosynthesis, 4-hydroxyphenylpyruvate biosynthesis, histidine biosynthesis, glutamine biosynthesis III, leucodelphinidin biosynthesis |
0.71 | 0.42 | -0.44 | ||
192 | C0073 | Cysteine | L-Cysteine | L-Cysteine | alanine biosynthesis III, cysteine biosynthesis I, gamma-glutamyl cycle (plant pathway), farnesylcysteine salvage pathway, molybdenum cofactor biosynthesis, thiamine biosynthesis II, cyanide detoxification II, indole glucosinolate breakdown (insect chewing induced), glutathione degradation, glutathione biosynthesis, molybdenum cofactor biosynthesis II (eukaryotes), cyanide degradation, homocysteine and cysteine interconversion, methionine biosynthesis II, tRNA charging, gamma-glutamyl cycle, coenzyme A biosynthesis |
0.7 | 0.45 | -0.44 | ||
193 | C0060 | Asparagine | D,L-Asparagine | L-Asparagine | asparagine degradation I, asparagine biosynthesis III (tRNA-dependent), asparagine biosynthesis I, tRNA charging, cyanide detoxification II |
0.69 | 0.43 | -0.43 | ||
194 | C0162 | MST_1588.3 | - | - | - | 0.68 | 0.42 | -0.44 | ||
195 | C0052 | Adenosine | - | Adenosine | adenine and adenosine salvage VI, S-adenosyl-L-methionine cycle II, cytokinins degradation, methionine degradation I (to homocysteine), adenine and adenosine salvage II |
0.68 | 0.43 | -0.46 | ||
196 | C0260 | Tyrosine | L-(-)-Tyrosine | L-Tyrosine | tyrosine biosynthesis II, 4-hydroxyphenylpyruvate biosynthesis, tyrosine degradation I, tyrosine biosynthesis I, tRNA charging, hydroxycinnamic acid tyramine amides biosynthesis |
0.67 | 0.45 | -0.46 | ||
197 | C0137 | Leucine | L-Leucine | L-Leucine | indole-3-acetyl-amino acid biosynthesis, leucine biosynthesis, jasmonoyl-amino acid conjugates biosynthesis I, IAA biosynthesis II, tRNA charging, leucine degradation I |
0.67 | 0.43 | -0.42 | ||
198 | C0004 | β-Alanine | - | β-Alanine | uracil degradation II (reductive), pantothenate biosynthesis, beta-alanine biosynthesis II, beta-alanine biosynthesis I |
0.66 | 0.46 | -0.44 | ||
199 | C0216 | Proline | L-Proline | L-Proline | proline degradation II, arginine degradation VI (arginase 2 pathway), L-Ndelta-acetylornithine biosynthesis, tRNA charging, citrulline biosynthesis, proline biosynthesis III |
0.65 | 0.48 | -0.43 | ||
200 | C0243 | Succinic acid | - | Succinate | flavonol biosynthesis, glyoxylate cycle, gibberellin biosynthesis III (early C-13 hydroxylation), TCA cycle variation V (plant), TCA cycle variation III (eukaryotic), aerobic respiration (alternative oxidase pathway), gibberellin inactivation I (2beta-hydroxylation), 4-aminobutyrate degradation IV, luteolin biosynthesis, anthocyanin biosynthesis (delphinidin 3-O-glucoside), leucodelphinidin biosynthesis, glutamate degradation IV, gibberellin biosynthesis I (non C-3, non C-13 hydroxylation), succinate + a ubiquinone -> a ubiquinol + fumarate, gibberellin biosynthesis II (early C-3 hydroxylation), flavonoid biosynthesis, superpathway of glyoxylate cycle and fatty acid degradation, aerobic respiration (cytochrome c), leucopelargonidin and leucocyanidin biosynthesis, anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside), scopoletin biosynthesis |
0.64 | 0.47 | -0.43 | ||
201 | C0257 | Tryptophan | L-Tryptophan | L-Tryptophan | glucosinolate biosynthesis from tryptophan, IAA biosynthesis I, tryptophan biosynthesis, camalexin biosynthesis, tRNA charging |
0.64 | 0.46 | -0.42 | ||
202 | C0097 | Glucosamine-6-phosphate | D-Glucosamine-6-phosphate | D-Glucosamine-6-phosphate | UDP-N-acetyl-D-glucosamine biosynthesis II | 0.63 | 0.42 | -0.43 |