4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on shoot hypoxia pCER5
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List of experiments correlated with "shoot hypoxia pCER5"  Help Download transcriptome of top 30
Score Experiment Correlation from
shoot hypoxia pCER5		 Correlation to
shoot hypoxia pCER5		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 shoot hypoxia pCER5 1.00 >More info 1.00 >More info shoot hypoxia total Original data GEO bulk
2 shoot control pCER5 0.88 >More info 0.87 >More info shoot control total Original data GEO bulk
3 shoot control pSultr2:2 0.56 >More info 0.58 >More info shoot control total Original data GEO bulk
4 miR 0h 0.56 >More info 0.57 >More info Col 0h Leaf Original data GEO bulk
5 shoot hypoxia pGL2 0.59 >More info 0.52 >More info shoot hypoxia total Original data GEO bulk
6 shoot control pGL2 0.55 >More info 0.53 >More info shoot control total Original data GEO bulk
7 shoot hypoxia p35S 0.43 >More info 0.65 >More info shoot hypoxia total Original data GEO bulk
8 AFB1 0h 0.34 >More info 0.69 >More info Col 0h Leaf Original data GEO bulk
9 Laer pretreat GA Flg22 1h 0.31 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
10 shoot control p35S 0.42 >More info 0.59 >More info shoot control total Original data GEO bulk
11 35S:CDO1 normoxia 0.39 >More info 0.61 >More info WT normoxia normoxia whole rosette Original data
12 shoot hypoxia pKAT1 0.39 >More info 0.59 >More info shoot hypoxia total Original data GEO bulk
13 Seedling KUA1-IOX est 0.24 >More info 0.74 >More info Seedling KUA1-IOX mock Original data
14 MPK6 ox Shoot Hypoxia 0.14 >More info 0.77 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
15 shoot hypoxia pRBCS 0.25 >More info 0.65 >More info shoot hypoxia total Original data GEO bulk
16 piffq FR 1h -0.35 >More info -0.50 >More info WT FR 1h whole seedling Original data GEO bulk
17 Col BTH 0.16 >More info 0.67 >More info Col rosettes Original data GEO bulk
18 Heat shock optimum 0.16 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
19 myb3 myb3r4d 0.24 >More info 0.56 >More info Wild type Col0-9d whole seedlings Original data GEO bulk
20 WT Shoot Hypoxia 0.25 >More info 0.55 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
21 rrd1 IBA -0.10 >More info -0.70 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
22 PBZ -0.29 >More info -0.50 >More info none PBZ Rosette Original data GEO bulk
23 4C 2h(SOIL) 0.26 >More info 0.53 >More info 4C 0h(SOIL) Original data GEO bulk
24 shoot control pRBCS 0.21 >More info 0.58 >More info shoot control total Original data GEO bulk
25 pab polysome -0.23 >More info -0.54 >More info WT polysome seedling shoot/aerial seedling Original data
26 TNT-seedlings 0.12 >More info 0.64 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
27 opr3 OPDA 0.5 h 0.06 >More info 0.69 >More info opr3 0 h Original data GEO bulk
28 Imbibed 1 h (seed) 0.14 >More info 0.60 >More info Dry seed Original data Time course of early seed germination
29 Red/FR Light45min 0.14 >More info 0.60 >More info FarRed Light 45min Original data Light treatments
30 35S-MIF1 light grown -0.09 >More info -0.65 >More info Light-grown WT control Original data GEO bulk
31 Leafminer damaged seedlings 0.17 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
32 Col0-PsmES4326-24hpi 0.12 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
33 35S::HRE1 Aerobic 0.50 >More info 0.21 >More info Col-0 wt Aerobic untreated control Original data GEO bulk
34 MPK6 ox Root Hypoxia 0.07 >More info 0.63 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
35 CsUBC13-OE -Fe 0.19 >More info 0.50 >More info Col -Fe root Original data GEO bulk
36 piffq 2d WL -0.18 >More info -0.51 >More info WT 2d WL whole seedling Original data GEO bulk
37 3x(p) 0.18 >More info 0.51 >More info 2x two week old seedlings Original data
38 SCR-GR Time 1H Dex 0.11 >More info 0.53 >More info SCR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
39 35S:VND7-VP16-GR+DEX +CHX -0.08 >More info -0.55 >More info 35S:VND7-VP16-GR+CHX 10mM cycloheximide (CHX) 2hrs followed by 10mM dexamethazone (DEX) 4hrs whole seedlings Original data GEO bulk
40 seed germinating in countinuous light 24h SL -0.05 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
41 WT 3H Cold 0.05 >More info 0.55 >More info WT control Original data GEO bulk
42 root - 08% oxygen - 30min 0.08 >More info 0.51 >More info root - 21% oxygen - 30min Original data GEO bulk
43 siliques AtHb1 control 0.06 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
44 seedling -S Exp 0.06 >More info 0.52 >More info seedling FN Exp seedling Original data
45 Light 3day ivd 0.56 >More info 0.01 >More info 0h ivd Original data
46 3x(m) 0.02 >More info 0.54 >More info 2x two week old seedlings Original data
47 IAA7mII over-expressor IAA Treated -0.13 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
48 coi1 -0.04 >More info -0.51 >More info Col-0 Leaves Original data GEO bulk
49 Shoot apex inflorescence (after bolting) -0.12 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
50 CCA1-ox 6am non-polysomal -0.00 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
51 hsfa1 quadruple mutant heat shock 0.08 >More info -0.51 >More info WT (Col-0) heat shock whole seedling Original data GEO bulk
52 RGA-GR-DEX 0.09 >More info -0.51 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
53 bri1-116 -0.32 >More info 0.73 >More info Col seedling Original data GEO bulk