4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on msh1 variegation Col-0
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List of experiments correlated with "msh1 variegation Col-0"  Help Download transcriptome of top 30
Score Experiment Correlation from
msh1 variegation Col-0		 Correlation to
msh1 variegation Col-0		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 msh1 variegation Col-0 1.00 >More info 1.00 >More info WT Col-0 above ground part of plant Original data GEO bulk
2 msh1 stunt 0.85 >More info 0.84 >More info WT Col-0 above ground part of plant Original data GEO bulk
3 dde2-2 9 hpi A. brassicicola 0.58 >More info 0.67 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
4 WT 3h -P 0.50 >More info 0.59 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
5 AZC 0.56 >More info 0.52 >More info noneHS Original data GEO bulk
6 irradiated leaf (WT 1d) 0.43 >More info 0.65 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
7 shoots WT 0uM Fe 0.64 >More info 0.43 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
8 UV Stress 24 h (shoot) 0.54 >More info 0.51 >More info Stress mock 24 h (shoot) Original data Stress treatments
9 Mutant siz1-3 (Drought) 0.55 >More info 0.49 >More info Col-0 (Drought) Original data GEO bulk
10 WT leaves - Fe 0.50 >More info 0.54 >More info WT leaves + Fe Leaves Original data GEO bulk
11 siz1-3 drought 0.55 >More info 0.49 >More info Col-0 drought Original data GEO bulk
12 pnp1-1 1wk -P 0.40 >More info 0.63 >More info WT 1wk -P No phosphate medium seedlings without roots Original data GEO bulk
13 IMI 4mM 0.52 >More info 0.50 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
14 E.orontii Infection 3 day 0.40 >More info 0.62 >More info Uninfection 3 day Original data Elicitor treatments
15 Nicotinamide-77hr 0.49 >More info 0.53 >More info WT-untreated-77hr nicotinamide aerial tissue Original data GEO bulk
16 pnp1-1 3h +P 0.51 >More info 0.49 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
17 coi1-2 0.49 >More info 0.51 >More info Col-0 mock Whole seedling Original data GEO bulk
18 Fenclorim 24hr 0.55 >More info 0.44 >More info Acetone 24hr root Original data GEO bulk
19 aox1a:rpoTmp untreated 0.55 >More info 0.44 >More info WT(Col0) untreated (control aox1a:rpoTmp) leaf Original data
20 UV 0.55 >More info 0.44 >More info WT aerial region Original data GEO bulk
21 msh1 recA3 heat shock 0.22 >More info 0.77 >More info WT heat shock above-ground parts Original data GEO bulk
22 Nicotinamide-89hr 0.55 >More info 0.43 >More info WT-untreated-89hr nicotinamide aerial tissue Original data GEO bulk
23 csn5 (csn5a-2 csn5b) light 0.60 >More info 0.36 >More info WT light Original data GEO bulk
24 S14-150 0.38 >More info 0.58 >More info wt Original data GEO bulk
25 Col-0 under 4 days salt 0.58 >More info 0.37 >More info Col-0 under control 4 days salt treatment rosette Original data
26 Laer pretreat GA Flg22 1h 0.24 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
27 PstDC3000 48h 0.39 >More info 0.55 >More info WT untreated 48hr leaf Original data GEO bulk
28 amiRAP aerobic -0.39 >More info -0.55 >More info WT aerobic aerobic Original data GEO bulk
29 vte2 leaves 0h LT 0.26 >More info 0.68 >More info Col leaves 0h LT h 9-11th adult leaves Original data
30 Col BTH 0.26 >More info 0.67 >More info Col rosettes Original data GEO bulk
31 irradiated leaf (cmt 1d) 0.41 >More info 0.52 >More info control leaf (cmt 1d) rosette leaf only Original data GEO bulk
32 Nicotinamide-69hr 0.52 >More info 0.39 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
33 Nicotinamide-81hr 0.56 >More info 0.34 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
34 35S::PI ap3-3 35S::AP-GR +DEX 0.29 >More info 0.61 >More info 0hr DEX Original data GEO bulk
35 gpa1 -ABA LF 0.50 >More info 0.39 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
36 HS 0.52 >More info 0.37 >More info noneHS Original data GEO bulk
37 Col0-PsmES4326-24hpi 0.28 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
38 csn4-1 dark 0.57 >More info 0.32 >More info WT light Original data GEO bulk
39 oligomycin 4 h 0.55 >More info 0.33 >More info mock 4 h 4 h_oligo seedling culture Original data GEO bulk
40 coi1-2 JA 0.50 >More info 0.37 >More info JA Whole seedling Original data GEO bulk
41 Methyl Jasmonate 3 h -0.26 >More info -0.61 >More info Mock 3 h Original data Basic hormone treatment of seedlings
42 csn3-1 light 0.58 >More info 0.29 >More info WT light Original data GEO bulk
43 IAA7mII over-expressor IAA Treated 0.17 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
44 Nicotinamide-61hr 0.54 >More info 0.31 >More info WT-untreated-61hr nicotinamide aerial tissue Original data GEO bulk
45 Nicotinamide-53hr 0.52 >More info 0.33 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
46 Nicotinamide-85hr 0.51 >More info 0.32 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
47 agb1 gpa1 -ABA LF 0.52 >More info 0.31 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
48 Seedling-HeatStressed TOTALmRNA 0.50 >More info 0.33 >More info Seedling-control TOTALmRNA seedling Original data
49 mkk1/mkk2 24h BTH rep 0.32 >More info 0.51 >More info Col-0 24h BTH rep Original data GEO bulk
50 seed germinating in countinuous light 24h SL 0.14 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
51 coi1 0.27 >More info 0.54 >More info Col-0 Leaves Original data GEO bulk
52 bio4-1 mutant leaves 0.24 >More info 0.57 >More info WT leaves leaves Original data GEO bulk
53 cat2-2; 8h switch to ambient CO2 concentrations; 0.24 >More info 0.57 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
54 Phytoprostane A1 4 h 0.51 >More info 0.28 >More info Col-0 Original data GEO bulk
55 E.orontii Infection 6 h 0.14 >More info 0.65 >More info Uninfection 6 h Original data Elicitor treatments
56 JA 3h -0.24 >More info -0.55 >More info EtOH 3h 3hr Original data GEO bulk
57 rpoTmp(line) MLD stressed 0.54 >More info 0.24 >More info WT(Col0) MLD stressed (control rpoTmp) leaf Original data
58 EBE-XVE +estradiol 0.21 >More info 0.56 >More info WT-Col-0 +estradiol shoot Original data GEO bulk
59 Laer treat paclobutrazol (PAC) 0.51 >More info 0.23 >More info Laer Control leaf discs Original data GEO bulk
60 seedlings + TSA 0.58 >More info 0.15 >More info control seedlings 10-day old whole seedling Original data GEO bulk
61 pad4-PsmES4326-24hpi -0.51 >More info -0.21 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
62 Apex BLS>>TCP4 14DAS 0.50 >More info 0.18 >More info Apex Col 14DAS Original data GEO bulk
63 bri1-116 -0.07 >More info 0.73 >More info Col seedling Original data GEO bulk
64 agb1 -ABA LF 0.51 >More info 0.14 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
65 Methyl Jasmonate 1 h -0.13 >More info -0.51 >More info Mock 1 h Original data Basic hormone treatment of seedlings
66 Whole root - low pH 1H 0.06 >More info 0.57 >More info Whole root - Std pH 1H pH 4.6 for 1 hr Original data GEO bulk
67 msh1 recA3 untreated 0.07 >More info 0.53 >More info WT untreated above-ground parts Original data GEO bulk
68 SA Treated 0.52 >More info 0.08 >More info Water Original data GEO bulk
69 aba2 1% sucrose 12-day-old 0.02 >More info 0.56 >More info Col-7 1% sucrose 12-day-old Original data GEO bulk
70 Shoot apex inflorescence (after bolting) -0.10 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
71 GRX-overexpression seedlings NaCl 0.05 >More info 0.50 >More info WT seedlings NaCl Seedlings Original data GEO bulk
72 FOX line K16331 0.51 >More info 0.03 >More info empty vector control (T3) FOX lines Original data GEO bulk
73 Heat shock optimum -0.14 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
74 Leafminer damaged seedlings -0.06 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
75 siliques AtHb1 control -0.04 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
76 CCA1-ox 6am non-polysomal -0.03 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data