4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on 04h Col-0
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List of experiments correlated with "04h Col-0"  Help Download transcriptome of top 30
Score Experiment Correlation from
04h Col-0		 Correlation to
04h Col-0		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 04h Col-0 1.00 >More info 1.00 >More info 00h Col-0 Original data GEO bulk
2 08h Col-0 0.86 >More info 0.81 >More info 00h Col-0 Original data GEO bulk
3 psad1 -0.83 >More info -0.73 >More info WS rosette leaves Original data GEO bulk
4 12h Col-0 0.79 >More info 0.76 >More info 00h Col-0 Original data GEO bulk
5 psad1-1 stn7-1 -0.80 >More info -0.72 >More info Col-0 rosette leaves Original data GEO bulk
6 low CO2 + dark -0.72 >More info -0.78 >More info normal CO2 + light Original data GEO bulk
7 petiole in D -0.71 >More info -0.61 >More info petiole in WL petioles Original data GEO bulk
8 det2 light-dark -0.72 >More info -0.59 >More info det2 light light-dark Original data GEO bulk
9 leaf blade in D -0.72 >More info -0.57 >More info leaf blade in WL leaf blades Original data GEO bulk
10 leaf blade in FRD -0.71 >More info -0.55 >More info leaf blade in WL leaf blades Original data GEO bulk
11 WT (Col) glucose 0.58 >More info 0.65 >More info WT (Col) glucose seedlings Original data GEO bulk
12 elf3-7-23ºC 0.52 >More info 0.71 >More info WT-23ºC Original data GEO bulk
13 Atss3 Dark8 -0.59 >More info -0.62 >More info Atss3 Dark0.5 Original data GEO bulk
14 Shoot submergence 24h -0.65 >More info -0.55 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
15 WT cold 0.58 >More info 0.62 >More info WT control All aerial tissue Original data GEO bulk
16 Shoot dark control 24h -0.61 >More info -0.58 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
17 seedling 6h after HZE atm-1 0.64 >More info 0.54 >More info seedling day 1 unirradiated atm-1 6h Original data
18 low CO2 + light -0.56 >More info -0.62 >More info normal CO2 + light Original data GEO bulk
19 Pseudomonas -0.55 >More info -0.63 >More info Control pseudomonas treated whole seedling Original data GEO bulk
20 Col-0 WT HL 3h 0.61 >More info 0.57 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
21 16h Col-0 0.60 >More info 0.57 >More info 00h Col-0 Original data GEO bulk
22 seedling 6h after Gamma atm-1 0.57 >More info 0.59 >More info seedling day 1 unirradiated atm-1 6h Original data
23 Night Time Treatment 0.57 >More info 0.59 >More info Night Time Control 1hr white light pulse aerial rosette Original data
24 60m light 0.51 >More info 0.64 >More info before light whole seedlings Original data GEO bulk
25 petiole in FRD -0.65 >More info -0.49 >More info petiole in WL petioles Original data GEO bulk
26 detached inflorescences 24h -0.57 >More info -0.55 >More info detached inflorescences 0h detached dark-held immature inflorescences inflorescences from the primary bolts Original data GEO bulk
27 Col-0 C2H4 24h -0.68 >More info -0.44 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
28 WT salt 12 h 0.59 >More info 0.52 >More info WT salt 0 h Salt with 120 mM NaCl for 24 h seedlings Original data GEO bulk
29 M6PR transgenic leaf 0mM NaCl -0.51 >More info -0.59 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
30 col 24h4c set4 0.51 >More info 0.57 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
31 Col whole leaf 6hpi -0.63 >More info -0.45 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
32 E.orontii Infection 6 h -0.48 >More info -0.60 >More info Uninfection 6 h Original data Elicitor treatments
33 pip3 At2g19270 TDNA 9 -0.51 >More info -0.56 >More info Col-0 whole plant Original data GEO bulk
34 Day Time Treatment 0.57 >More info 0.50 >More info Day Time Control 1hr white light pulse aerial rosette Original data
35 35S::KLU 0.45 >More info 0.60 >More info WT Shoot Original data
36 12h volatiles Sm. R3089 -0.56 >More info -0.47 >More info 12h untreated whole seedling Original data GEO bulk
37 pap1-D/tt4 -0.57 >More info -0.46 >More info Col-0 aerial part Original data
38 spch -0.62 >More info -0.41 >More info Col-0 WT whole seedling Original data GEO bulk
39 4C 24h 0.47 >More info 0.56 >More info 4C 0h Original data GEO bulk
40 35S::MBF1c -0.49 >More info -0.54 >More info control Original data GEO bulk
41 gabaculin -0.53 >More info -0.49 >More info WT Col-0 seedling Original data GEO bulk
42 tt4 -0.56 >More info -0.46 >More info Col-0 aerial part Original data
43 FAMA induced 4h 0.49 >More info 0.53 >More info control 4h Whole seedling Original data GEO bulk
44 sfr6 drought 0.46 >More info 0.56 >More info WT drought All aerial tissue Original data GEO bulk
45 spx1 spx2 complete 0.57 >More info 0.44 >More info WT complete seedlings Original data
46 WOX1-1 -0.55 >More info -0.46 >More info Col-0 aerial part Original data
47 Dry pre-dawn 0.49 >More info 0.52 >More info Wet pre-dawn water-limited whole rosette Original data GEO bulk
48 Col-7 Sucrose 0.48 >More info 0.52 >More info col-7 Original data GEO bulk
49 MYB12OX/tt4 -0.55 >More info -0.44 >More info Col-0 aerial part Original data
50 1 h Light Total RNA 0.55 >More info 0.44 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
51 PNO8 12 h -0.39 >More info -0.60 >More info Mock 12 h Original data Effect of other inhibitors on seedlings
52 20h Col-0 0.56 >More info 0.42 >More info 00h Col-0 Original data GEO bulk
53 Shoot dark control 7h -0.50 >More info -0.48 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
54 low water potential 0.51 >More info 0.47 >More info control Col-0 -1.2 MPa whole seedlings Original data GEO bulk
55 WT (Col-0) inflorescence drought day 3 0.59 >More info 0.39 >More info WT (Col-0) inflorescence well-watered day 3 Unopen flower buds Original data GEO bulk
56 flu dark 8hours/30 minute light -0.55 >More info -0.42 >More info col dark 8hours/30 minute light Original data GEO bulk
57 sfr3 control 0.35 >More info 0.61 >More info WT control All aerial tissue Original data GEO bulk
58 apk1 apk2 0.39 >More info 0.56 >More info Col0-control whole rosette Original data GEO bulk
59 vtc2-1 0.40 >More info 0.55 >More info Col-0 whole plant Original data GEO bulk
60 Nicotinamide-77hr -0.51 >More info -0.44 >More info WT-untreated-77hr nicotinamide aerial tissue Original data GEO bulk
61 gun4-1 -0.51 >More info -0.44 >More info WT Col-0 seedling Original data GEO bulk
62 gun5 norflurazon -0.57 >More info -0.38 >More info gun5 control Original data GEO bulk
63 WT roots - Fe -0.32 >More info -0.63 >More info WT roots + Fe Roots Original data GEO bulk
64 irradiated leaf (cmt 5d) -0.52 >More info -0.42 >More info control leaf (cmt 5d) rosette leaf only Original data GEO bulk
65 ex1 flu dark 8hours/30 minute light -0.56 >More info -0.36 >More info col dark 8hours/30 minute light Original data GEO bulk
66 Nicotinamide-53hr -0.56 >More info -0.36 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
67 shoots WT 0uM Fe -0.56 >More info -0.36 >More info shoots WT 100uM Fe 0uM Fe shoots Original data GEO bulk
68 6h volatiles Sm. R3089 -0.36 >More info -0.56 >More info 6h untreated whole seedling Original data GEO bulk
69 mutant acs1A (single mutant) -0.60 >More info -0.32 >More info col control (single mutant) Original data GEO bulk
70 pnp1-1 3h +P -0.60 >More info -0.30 >More info WT 3h +P Full nutrient medium (+P) seedlings without roots Original data GEO bulk
71 30m light 0.35 >More info 0.54 >More info before light whole seedlings Original data GEO bulk
72 2hr transitory KNO3 PrR cell -0.30 >More info -0.59 >More info 2hr KCl control PrR cell Protoplasted root cells Original data GEO bulk
73 A2hsfa1-ox in quadruple mutant 0.54 >More info 0.33 >More info hsfa1 quadruple mutant whole seedling Original data GEO bulk
74 Nicotinamide-85hr -0.51 >More info -0.36 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
75 10min Reillumination IP RNA -0.23 >More info -0.64 >More info 1h Dark IP RNA 1 h darkness plus 10 min reillumination whole seedlings Original data GEO bulk
76 Nicotinamide-57hr -0.58 >More info -0.29 >More info WT-untreated-57hr nicotinamide aerial tissue Original data GEO bulk
77 sdg2 0.50 >More info 0.36 >More info wt seedling Original data GEO bulk
78 MYB76 OE 0.50 >More info 0.36 >More info WT for MYB29/76 Original data GEO bulk
79 Col-0 (t-zeatin 3 h) 0.30 >More info 0.55 >More info Col-0 Original data Cytokinin treatment of seedlings
80 cca1-lhy 60m light 0.34 >More info 0.51 >More info 60m light whole seedlings Original data GEO bulk
81 erf104-ko H2O 4h 0.50 >More info 0.35 >More info Col-0 H2O 4h Original data GEO bulk
82 tmm1-inflorescence-tips 0.26 >More info 0.59 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
83 3x(p) -0.28 >More info -0.57 >More info 2x two week old seedlings Original data
84 short 17-degree- 0.31 >More info 0.53 >More info control short Original data GEO bulk
85 short 12-degree- 0.31 >More info 0.53 >More info control short Original data GEO bulk
86 WT+sucrose 0.34 >More info 0.50 >More info WT+no sugars rosette leaves Original data GEO bulk
87 Leafminer damaged seedlings 0.28 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
88 elevated CO2 normal Mg shoot 0.51 >More info 0.32 >More info atmospheric CO2 normal Mg shoot Shoot Original data
89 agb1 -ABA LF -0.27 >More info -0.56 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
90 FarRed Light 45min -0.20 >More info -0.62 >More info White Light 45min Original data Light treatments
91 phyB mutant 16C 10hrs 0.51 >More info 0.29 >More info 16C 10h whole plant excluding roots Original data GEO bulk
92 4C 1h -0.17 >More info -0.63 >More info 4C 0h Original data GEO bulk
93 Nicotinamide-81hr -0.58 >More info -0.22 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
94 Glyphosate EC50 0.27 >More info 0.52 >More info Carrier (Glyphosate) Original data GEO bulk
95 pap1-D -0.51 >More info -0.27 >More info Col-0 aerial part Original data
96 seedling SPL13 -0.22 >More info -0.56 >More info seedling Col-0 Original data GEO bulk
97 Col whole leaf 3dpi -0.23 >More info -0.53 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
98 ptpks2 0.26 >More info 0.50 >More info Col-WT leaves Original data GEO bulk
99 ago4-1 -0.60 >More info -0.12 >More info WT La-er whole plants Original data GEO bulk
100 AtHDA6(rts1-1) rts1-5 -0.54 >More info -0.18 >More info null-mutant whole plant Original data GEO bulk
101 seedling h S Exp 0.01 >More info 0.71 >More info seedling -S Exp seedling Original data
102 Light 3day hml 0.18 >More info 0.53 >More info 0h hml Original data
103 root epidermis and lateral root cap -S 0.18 >More info 0.53 >More info root epidermis and lateral root cap pH5.7 Original data GEO bulk
104 pmr5 pmr6 -0.53 >More info -0.16 >More info Col-0 Original data GEO bulk
105 IAA7mII over-expressor IAA Treated -0.01 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
106 seed germinating in countinuous light 24h SL -0.01 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
107 Shoot apex inflorescence (after bolting) -0.02 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
108 bri1-116 -0.10 >More info 0.73 >More info Col seedling Original data GEO bulk
109 A2hsfa1-ox in quadruple mutant heat shock 0.51 >More info 0.11 >More info hsfa1 quadruple mutant heat shock whole seedling Original data GEO bulk
110 phosphate-starved -0.04 >More info -0.58 >More info control shoot tissue Original data GEO bulk
111 Botrytis cinerea 48h 0.05 >More info 0.57 >More info control 48h Original data GEO bulk
112 current injection 0.11 >More info 0.50 >More info no current injection 4 microampere of electric current for 1 second Original data GEO bulk
113 Laer pretreat GA Flg22 1h -0.11 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
114 pip3 At2g19270 TDNA 1 -0.52 >More info -0.06 >More info Col-0 whole plant Original data GEO bulk
115 NahG -0.04 >More info -0.54 >More info Col-0 Leaves Original data GEO bulk
116 ABA 1 h 0.08 >More info 0.50 >More info Mock 1 h Original data Basic hormone treatment of seedlings
117 Shoot submergence 7h -0.55 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
118 CCA1-ox 6am non-polysomal 0.04 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
119 shoots bhlh100/101 100uM Fe -0.51 >More info -0.01 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
120 Heat shock optimum -0.13 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
121 HSP90 Reduced RNAi-A1 -0.53 >More info 0.04 >More info HSP90 Reduced Col-0 CS60000 All aerial tissue Original data GEO bulk
122 Total RNA 35S:HF-RPL18 -0.06 >More info 0.54 >More info Total RNA csp1 12h non-stress rosettes Original data GEO bulk
123 xrn4-5 flower 0.51 >More info -0.03 >More info Col-0 flower inflorescence Original data GEO bulk
124 phyB mutant 16C 4hrs -0.56 >More info 0.09 >More info 16C 4hs whole plant excluding roots Original data GEO bulk
125 AtMYB30-ox 2-4h Xanthomonas 0.08 >More info -0.55 >More info WT 2-4h Xanthomonas Original data GEO bulk
126 root - 08% oxygen - 30min 0.13 >More info -0.51 >More info root - 21% oxygen - 30min Original data GEO bulk
127 siliques AtHb1 control -0.19 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
128 Col0-PsmES4326-24hpi -0.29 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
129 -Sulfate 24 h 0.25 >More info -0.57 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
130 Col BTH -0.52 >More info 0.67 >More info Col rosettes Original data GEO bulk