4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on C24 24h cold
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List of experiments correlated with "C24 24h cold"  Help Download transcriptome of top 30
Score Experiment Correlation from
C24 24h cold		 Correlation to
C24 24h cold		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 C24 24h cold 1.00 >More info 1.00 >More info Col 24h cold leaf Original data GEO bulk
2 aln-1 -0.56 >More info -0.77 >More info Col-0 Aerial part of seedlings Original data
3 mp-B4149 mutant IAA 0.56 >More info 0.63 >More info GR-bdl IAA Original data GEO bulk
4 30m light 0.44 >More info 0.72 >More info before light whole seedlings Original data GEO bulk
5 WT roots - Fe -0.34 >More info -0.80 >More info WT roots + Fe Roots Original data GEO bulk
6 M6PR transgenic leaf 0mM NaCl -0.45 >More info -0.66 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
7 60m light 0.45 >More info 0.66 >More info before light whole seedlings Original data GEO bulk
8 M6PR transgenic 0mM NaCl -0.50 >More info -0.59 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
9 L2.4 mutant 0.44 >More info 0.62 >More info Wt Original data GEO bulk
10 F1 whole seedlings root 0.32 >More info 0.72 >More info Col whole seedlings root Seedlings Original data GEO bulk
11 Rsch 3d -0.42 >More info -0.59 >More info Rsch CA Leaves Original data
12 shoot-10 μM DEX- 6 hr -0.42 >More info -0.59 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
13 SOS1 0mM NaCl -0.42 >More info -0.58 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
14 Col ozone 3h -0.28 >More info -0.72 >More info Col clean-air 3h ozone Original data GEO bulk
15 col-5 hrpA 12h -0.39 >More info -0.61 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
16 miR393 0h 0.23 >More info 0.76 >More info WT 0h Leaf tissue Original data GEO bulk
17 Col(gl) leaf 0mM NaCl -0.40 >More info -0.57 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
18 petiole in D -0.38 >More info -0.59 >More info petiole in WL petioles Original data GEO bulk
19 Col(gl) 0mM NaCl -0.40 >More info -0.57 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
20 CBF3 0mM NaCl -0.40 >More info -0.57 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
21 1 h Light IP RNA 0.38 >More info 0.59 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
22 Col-0 9 hpi A. brassicicola -0.40 >More info -0.57 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
23 bri1-116 0.23 >More info 0.73 >More info Col seedling Original data GEO bulk
24 Night Time Treatment 0.33 >More info 0.62 >More info Night Time Control 1hr white light pulse aerial rosette Original data
25 DUO1 induced 6h 0.39 >More info 0.55 >More info 6hr-not-induced whole plant Original data GEO bulk
26 tumour -0.38 >More info -0.55 >More info non-tumor tumour Original data GEO bulk
27 toc1-1-85hr 0.30 >More info 0.63 >More info WT-untreated-85hr none seedlings aerial tissue Original data GEO bulk
28 cpr5scv1 -0.42 >More info -0.51 >More info WT(COL) Original data GEO bulk
29 Total RNA csp1 cold -0.39 >More info -0.53 >More info Total RNA csp1 12h cold (4C) rosettes Original data GEO bulk
30 E.coli TUV86 2 fliC 7h -0.36 >More info -0.56 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
31 GST NPP1 4 h (leaf) -0.34 >More info -0.58 >More info Mock 4 h (leaf) Original data Elicitor treatments
32 1 h Light Total RNA 0.34 >More info 0.58 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
33 Day Time Treatment 0.34 >More info 0.58 >More info Day Time Control 1hr white light pulse aerial rosette Original data
34 Shoot submergence 24h -0.40 >More info -0.51 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
35 IRP1-OE-Fe--shoot -0.38 >More info -0.53 >More info COL-0-Fe--shoot shoot Original data
36 Col 3d -0.38 >More info -0.53 >More info Col CA Leaves Original data
37 shoot-10 μM DEX- 12 hr -0.34 >More info -0.57 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
38 petiole in FRD -0.37 >More info -0.53 >More info petiole in WL petioles Original data GEO bulk
39 Shoot dark control 7h -0.36 >More info -0.54 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
40 WT cold -0.37 >More info -0.53 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
41 sfr2 control 0.38 >More info 0.52 >More info WT control All aerial tissue Original data GEO bulk
42 leaf blade in D -0.35 >More info -0.54 >More info leaf blade in WL leaf blades Original data GEO bulk
43 3x(p) -0.24 >More info -0.65 >More info 2x two week old seedlings Original data
44 ERF96OE -0.37 >More info -0.52 >More info WT leaf Original data
45 AvrRpm1 2 h (leaf) -0.30 >More info -0.59 >More info Mock 2 h (leaf) Original data Pseudomonas syringae pv. tomato or pv. phaseolicola infection
46 Polysomal RNA 35S:AtCSP1-FH1 -0.20 >More info -0.68 >More info Polysomal RNA csp1 12h non-stress rosettes Original data GEO bulk
47 ein2-1 9 hpi A. brassicicola -0.34 >More info -0.54 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
48 OsSAP11 expressing 0.37 >More info 0.51 >More info WT seedlings Original data GEO bulk
49 ABA control 0.24 >More info 0.64 >More info No ABA control Original data GEO bulk
50 MPK6 ox Shoot Hypoxia -0.29 >More info -0.59 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
51 ORS1 induced -0.33 >More info -0.54 >More info mock-induced rosette leaves Original data GEO bulk
52 hrpA 7h -0.34 >More info -0.53 >More info Mock 7h hrpA Original data GEO bulk
53 P35S:rGRF3 -0.36 >More info -0.51 >More info WS Original data GEO bulk
54 E.coli 0157 H7 7h -0.28 >More info -0.59 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
55 Rsch CA 0.35 >More info 0.52 >More info Col CA Leaves Original data
56 seedlings protease IV -0.36 >More info -0.51 >More info seedlings nontreated control whole seedling Original data
57 low CO2 + dark -0.30 >More info -0.57 >More info normal CO2 + light Original data GEO bulk
58 anti-sense for AtAOX1a -0.30 >More info -0.56 >More info WT Original data GEO bulk
59 msh1 albino -0.35 >More info -0.51 >More info WT aerial part Original data GEO bulk
60 ataf1-1 mutant Col-0 Bgh inoculated -0.34 >More info -0.51 >More info ataf1-1 mutant Col-0 Un-inoculated Original data GEO bulk
61 35S:RPS4 eds1-2 24h 0.32 >More info 0.53 >More info 35S:RPS4 24h leaves Original data
62 TAMM27 roots 2hr KNO3 nitrogen 0.27 >More info 0.58 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
63 Hydrogen Peroxide 500 uM -0.23 >More info -0.62 >More info Control RB and PER Hydrogen Peroxide Original data
64 GST 4 h (leaf) -0.27 >More info -0.57 >More info Mock 4 h (leaf) Original data Elicitor treatments
65 mkk2 24h BTH rep -0.29 >More info -0.54 >More info Col-0 24h BTH rep Original data GEO bulk
66 PIF5ox high R/FR 0.32 >More info 0.51 >More info Col-0 high R/FR high R/FR seedlings Original data GEO bulk
67 anac017-2 AntimycinA 3h 0.32 >More info 0.51 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
68 hrpA fliC 7h -0.33 >More info -0.50 >More info Mock 7h hrpA fliC Original data GEO bulk
69 Col-0 48 hpi -0.33 >More info -0.50 >More info Col-0 uninoculated Original data GEO bulk
70 WT-16ºC -0.23 >More info -0.60 >More info WT-23ºC Original data GEO bulk
71 low CO2 + light -0.23 >More info -0.60 >More info normal CO2 + light Original data GEO bulk
72 rrd1 IBA 0.26 >More info 0.56 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
73 pab polysome 0.27 >More info 0.55 >More info WT polysome seedling shoot/aerial seedling Original data
74 seedlings-week-old RECA1-overexpressing
transgenic		 -0.31 >More info -0.51 >More info seedlings-week-old Col-0 seedlings Original data
75 leaf blade in FRD -0.31 >More info -0.50 >More info leaf blade in WL leaf blades Original data GEO bulk
76 Red Light 4 h -0.24 >More info -0.56 >More info White Light 4 h Original data Light treatments
77 Shoot dark control 24h -0.29 >More info -0.51 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
78 hrcC -0.30 >More info -0.50 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
79 del1-1 mutant 5d uninfected -0.18 >More info -0.62 >More info Col-0 5d uininfected mature fully expanded leaves Original data GEO bulk
80 E.orontii Infection 3 day -0.22 >More info -0.56 >More info Uninfection 3 day Original data Elicitor treatments
81 WT 3h -P -0.25 >More info -0.53 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
82 nas4x leaves + Fe -0.27 >More info -0.51 >More info WT leaves + Fe Leaves Original data GEO bulk
83 35S::MBF1c -0.25 >More info -0.53 >More info control Original data GEO bulk
84 Dex-rga(delta17) 4h GA4 0.23 >More info 0.55 >More info Vector 4h GA4 shoots Original data GEO bulk
85 agb1 -ABA LF -0.11 >More info -0.66 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
86 6h volatiles Sm. R3089 -0.19 >More info -0.58 >More info 6h untreated whole seedling Original data GEO bulk
87 CBF3 100mM NaCl -0.14 >More info -0.62 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
88 Lipopolysaccaride4 h (leaf) -0.24 >More info -0.51 >More info Mock 4 h (leaf) Original data Elicitor treatments
89 WT 2-4h Xanthomonas -0.20 >More info -0.55 >More info WT T0 Original data GEO bulk
90 Col-0 35S:MBS1 HL 3h 0.21 >More info 0.53 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
91 gpa1 -ABA GC 0.17 >More info 0.56 >More info Col-0 -ABA GC Guard cells taken for mature leaves of five week-old plants Original data GEO bulk
92 Col-0 SA -0.23 >More info -0.50 >More info Col-0 Original data GEO bulk
93 RGA-GR-DEX -0.17 >More info -0.54 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
94 toc1-1-93hr -0.17 >More info -0.54 >More info WT-untreated-93hr none seedlings aerial tissue Original data GEO bulk
95 bHLH122 ox 0.20 >More info 0.51 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
96 3x(m) -0.13 >More info -0.57 >More info 2x two week old seedlings Original data
97 mpk6-ko Flg22 4h -0.17 >More info -0.50 >More info mpk6-ko H2O 4h Original data GEO bulk
98 afb3-1 2h KNO3 0.12 >More info 0.55 >More info Ws 2h KNO3 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
99 Shoot apex inflorescence (after bolting) 0.01 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
100 NahG -0.15 >More info -0.51 >More info Col-0 Leaves Original data GEO bulk
101 seedling 24h after Gamma WT 0.15 >More info 0.50 >More info seedling day 2 unirradiated WT 24h Original data
102 IAA7mII over-expressor IAA Treated -0.04 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
103 seed germinating in countinuous light 24h SL -0.04 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
104 amiRAP aerobic 0.11 >More info 0.51 >More info WT aerobic aerobic Original data GEO bulk
105 Imbibed 1 h (seed) -0.05 >More info -0.54 >More info Dry seed Original data Time course of early seed germination
106 1h +Pi 0.09 >More info 0.50 >More info 1h -Pi root Original data GEO bulk
107 PNO8 12 h -0.05 >More info -0.53 >More info Mock 12 h Original data Effect of other inhibitors on seedlings
108 Mh0 UV -0.06 >More info -0.50 >More info Mh0 mock UV seedling Original data
109 CCA1-ox 6am non-polysomal 0.03 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
110 agb1 gpa1 +ABA LF 0.01 >More info 0.50 >More info Col-0 +ABA LF Leaves of five week-old plants Original data GEO bulk
111 WT 3H Cold 0.02 >More info -0.52 >More info WT control Original data GEO bulk
112 6-trichlorophenoxyacetic acid 3 h 0.03 >More info -0.51 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
113 Col BTH -0.23 >More info 0.67 >More info Col rosettes Original data GEO bulk
114 vtc2-1 0.11 >More info -0.54 >More info Col-0 whole plant Original data GEO bulk
115 0h hml -0.09 >More info 0.51 >More info 0h wt Original data
116 siliques AtHb1 control -0.10 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
117 irradiated leaf (WT 5d) -0.08 >More info 0.50 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
118 Laer pretreat GA Flg22 1h -0.30 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
119 35S:RPS4 rrs1-11 24h 0.16 >More info -0.53 >More info 35S:RPS4 24h leaves Original data
120 Heat shock optimum -0.29 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
121 Col0-PsmES4326-24hpi -0.31 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
122 Leafminer damaged seedlings -0.37 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk