4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on seed coat
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List of experiments correlated with "seed coat"  Help Download transcriptome of top 30
Score Experiment Correlation from
seed coat		 Correlation to
seed coat		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 seed coat 1.00 >More info 1.00 >More info Control for tissue data Original data GEO bulk
2 seed coat mature green 0.92 >More info 0.89 >More info Control for tissue data seed coat captured by LCM Original data GEO bulk
3 seed coat heart stage 0.89 >More info 0.90 >More info Control for tissue data seed coat captured by LCM Original data GEO bulk
4 chalazal seed coat 0.89 >More info 0.90 >More info Control for tissue data Original data GEO bulk
5 whole seeds heart stage 0.88 >More info 0.90 >More info Control for tissue data whole seeds captured by LCM Original data GEO bulk
6 whole seeds mature green 0.89 >More info 0.89 >More info Control for tissue data whole seeds captured by LCM Original data GEO bulk
7 whole seeds 0.89 >More info 0.88 >More info Control for tissue data Original data GEO bulk
8 peripheral endosperm mature green 0.88 >More info 0.88 >More info Control for tissue data peripherial endosperm captured by LCM Original data GEO bulk
9 chalazal seed coat mature green 0.88 >More info 0.88 >More info Control for tissue data chalazal seed coat captured by LCM Original data GEO bulk
10 micropylar endosperm mature green 0.87 >More info 0.88 >More info Control for tissue data micropylar endosperm captured by LCM Original data GEO bulk
11 embryo proper mature green 0.87 >More info 0.87 >More info Control for tissue data embryo proper captured by LCM Original data GEO bulk
12 peripherial endosperm 0.86 >More info 0.88 >More info Control for tissue data Original data GEO bulk
13 chalazal endosperm mature green 0.86 >More info 0.87 >More info Control for tissue data chalazal endosperm captured by LCM Original data GEO bulk
14 chalazal endosperm 0.84 >More info 0.89 >More info Control for tissue data Original data GEO bulk
15 embryo proper 0.86 >More info 0.87 >More info Control for tissue data Original data GEO bulk
16 micropylar endosperm heart stage 0.85 >More info 0.87 >More info Control for tissue data micropylar endosperm captured by LCM Original data GEO bulk
17 peripheral endosperm heart stage 0.85 >More info 0.87 >More info Control for tissue data peripheral endosperm captured by LCM Original data GEO bulk
18 lec1-1 Cotyledon Stage Seed 0.85 >More info 0.87 >More info Control for tissue data Original data GEO bulk
19 embryo proper heart stage 0.85 >More info 0.87 >More info Control for tissue data embryo proper captured by LCM Original data GEO bulk
20 Bud 0.84 >More info 0.87 >More info Control for tissue data pollen grains and tubes Original data
21 lec1-1 Mature Green Seed 0.85 >More info 0.86 >More info Control for tissue data Original data GEO bulk
22 QC 0.84 >More info 0.87 >More info Control for tissue data FACS-sorted protoplasts from roots Original data
23 Cells whole embryo 0.84 >More info 0.87 >More info Control for tissue data whole embryo Original data
24 Section Root from70 mm to 340 mm harvested
immediately		 0.84 >More info 0.87 >More info Control for tissue data Original data GEO bulk
25 Regenerating Stump Root Tip Cut 130 mm andn Recut
13 hrs Taking 70 mm of Stump (4dpg)		 0.84 >More info 0.86 >More info Control for tissue data Original data GEO bulk
26 lec1-1 Globular Stage Seed 0.84 >More info 0.86 >More info Control for tissue data Original data GEO bulk
27 chalazal endosperm heart stage 0.84 >More info 0.86 >More info Control for tissue data chalazal endosperm captured by LCM Original data GEO bulk
28 lec1-1 Post-Mature Green Seed 0.84 >More info 0.86 >More info Control for tissue data Original data GEO bulk
29 Nuclei proembryo 0.83 >More info 0.87 >More info Control for tissue data proembryo Original data
30 intact root control 0.84 >More info 0.86 >More info Control for tissue data mock whole root Original data GEO bulk
31 Regenerating Stump Root Tip Cut 130 mm andn Recut
5 hrs Taking 70 mm of Stump (4dpg)		 0.84 >More info 0.86 >More info Control for tissue data Original data GEO bulk
32 Ambient CO2 leaf primordia 0.83 >More info 0.86 >More info Control for tissue data leaf primordia Original data
33 lec1-1 24h post-fertilization Seed 0.83 >More info 0.86 >More info Control for tissue data Original data GEO bulk
34 Inflorescences ler 0.83 >More info 0.86 >More info Control for tissue data inflorescences Original data GEO bulk
35 Nuclei suspensor 0.83 >More info 0.86 >More info Control for tissue data suspensor Original data
36 pericycle control 0.84 >More info 0.85 >More info Control for tissue data mock pericycle Original data GEO bulk
37 ovule 0.83 >More info 0.86 >More info Control for tissue data ovule Original data GEO bulk
38 Regenerating Stump Root Tip Cut 130 mm andn Recut
0 hrs Taking 70 mm of Stump (8 dpg)		 0.83 >More info 0.86 >More info Control for tissue data Original data GEO bulk
39 Regenerating Stump Root Tip Cut 130 mm andn Recut
0 hrs Taking 70 mm of Stump (4dpg)		 0.83 >More info 0.86 >More info Control for tissue data Original data GEO bulk
40 Root from tip to 130 mm proximal to tip (cut
4dpg)		 0.83 >More info 0.86 >More info Control for tissue data Original data GEO bulk
41 seed germinating in countinuous light 48 h SL 0.83 >More info 0.86 >More info Control for tissue data seed Original data GEO bulk
42 silique 0.84 >More info 0.85 >More info Control for tissue data silique Original data GEO bulk
43 epidermis control 0.84 >More info 0.85 >More info Control for tissue data mock epidermis Original data GEO bulk
44 Regenerating Stump Root Tip Cut 130 mm andn Recut
22 hrs Taking 70 mm of Stump (4dpg)		 0.83 >More info 0.86 >More info Control for tissue data Original data GEO bulk
45 Root from tip to 130 mm proximal to tip (cut
8dpg)		 0.83 >More info 0.86 >More info Control for tissue data Original data GEO bulk
46 Shoot apex vegetative 0.83 >More info 0.86 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
47 Shoot apex transition (before bolting) 0.83 >More info 0.86 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
48 torpedo-basal 0.83 >More info 0.86 >More info Control for tissue data torpedo embryo basal tissue Original data GEO bulk
49 seed germinating in countinuous light 6 h SL 0.83 >More info 0.85 >More info Control for tissue data seed Original data GEO bulk
50 Callus 0.83 >More info 0.85 >More info Control for tissue data callus Original data GEO bulk
51 Carpels stage15 0.83 >More info 0.85 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
52 lateral nectary stage 11-12 0.83 >More info 0.85 >More info Control for tissue data lateral nectaries Original data GEO bulk
53 KAN1 0.83 >More info 0.85 >More info Control for tissue data shoot apical meristem Original data GEO bulk
54 Shoot apex vegetative &Young leaves 0.83 >More info 0.85 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
55 LAS 0.83 >More info 0.85 >More info Control for tissue data shoot apical meristem Original data GEO bulk
56 median nectary stage 14-15 0.83 >More info 0.85 >More info Control for tissue data median nectaries Original data GEO bulk
57 Pedicels stage15 0.83 >More info 0.85 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
58 Hypocotyl 0.83 >More info 0.85 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
59 Seeds stage3 with siliques 0.83 >More info 0.85 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
60 Flower (stage12) 0.83 >More info 0.85 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
61 Atape2 low light 0.83 >More info 0.85 >More info Control for tissue data shoot apical meristem Original data GEO bulk
62 HDG4 0.83 >More info 0.85 >More info Control for tissue data shoot apical meristem Original data GEO bulk
63 Anther 0.83 >More info 0.85 >More info Control for tissue data anther Original data
64 seed germinating in countinuous light 12 h SL 0.83 >More info 0.85 >More info Control for tissue data seed Original data GEO bulk
65 Stem 1st node 0.83 >More info 0.84 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
66 seed germinating in countinuous light 1 h SL 0.83 >More info 0.84 >More info Control for tissue data seed Original data GEO bulk
67 Leaf 0.83 >More info 0.84 >More info Control for tissue data leaf Original data GEO bulk
68 root hair 0.83 >More info 0.84 >More info Control for tissue data root hairs Original data GEO bulk
69 Petals stage15 0.83 >More info 0.84 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
70 Flowers stage15 0.83 >More info 0.84 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
71 Petiol (leaf7) 0.83 >More info 0.84 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
72 in vivo pollen tube 0.83 >More info 0.84 >More info Control for tissue data pollen tube Original data GEO bulk
73 seed during stratification 48 h S 0.83 >More info 0.84 >More info Control for tissue data seed Original data GEO bulk
74 Rosette leaf No12 0.83 >More info 0.84 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
75 Stem 2ndinternode 0.83 >More info 0.84 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
76 WT cotyledons 0.83 >More info 0.84 >More info Control for tissue data cotyledons Original data
77 seedling 0.83 >More info 0.84 >More info Control for tissue data seedling Original data GEO bulk
78 unpollinated pistil 0.83 >More info 0.84 >More info Control for tissue data pistil Original data GEO bulk
79 AtHB8 0.83 >More info 0.84 >More info Control for tissue data shoot apical meristem Original data GEO bulk
80 HMG 0.83 >More info 0.84 >More info Control for tissue data shoot apical meristem Original data GEO bulk
81 S17 0.83 >More info 0.84 >More info Control for tissue data shoot apical meristem Original data GEO bulk
82 siliques 0.83 >More info 0.84 >More info Control for tissue data Original data GEO bulk
83 flowers 0.82 >More info 0.85 >More info Control for tissue data Original data GEO bulk
84 Ambient CO2 expanding leaf 0.83 >More info 0.84 >More info Control for tissue data expanding leaf Original data
85 heart-stage-root 0.81 >More info 0.85 >More info Control for tissue data Original data GEO bulk
86 globular-apical 0.81 >More info 0.85 >More info Control for tissue data globular embryo apical tissue Original data GEO bulk
87 globular-basal 0.81 >More info 0.85 >More info Control for tissue data globular embryo basal tissue Original data GEO bulk
88 heart-stage-cotyledon 0.81 >More info 0.85 >More info Control for tissue data Original data GEO bulk
89 Apex 5DAS 0.82 >More info 0.84 >More info Control for tissue data Original data GEO bulk
90 Seeds stage8 w/o siliques 0.83 >More info 0.83 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
91 cortex 0.82 >More info 0.84 >More info Control for tissue data cortex Original data GEO bulk
92 flower-buds 0.82 >More info 0.84 >More info Control for tissue data Original data GEO bulk
93 Mature roots 0.82 >More info 0.84 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
94 Proximalhalf (leaf7) 0.83 >More info 0.83 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
95 flower 0.82 >More info 0.84 >More info Control for tissue data flower Original data GEO bulk
96 Expanding leaf 0.82 >More info 0.84 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
97 lateral nectary stage 14-15 0.82 >More info 0.84 >More info Control for tissue data lateral nectaries Original data GEO bulk
98 seed during stratification 12 h S 0.83 >More info 0.83 >More info Control for tissue data seed Original data GEO bulk
99 Apex 14DAS 0.82 >More info 0.84 >More info Control for tissue data Original data GEO bulk
100 dry seed 0 h 0.83 >More info 0.83 >More info Control for tissue data seed Original data GEO bulk
101 seed freshly harvested H 0.83 >More info 0.83 >More info Control for tissue data seed Original data GEO bulk
102 Ambient CO2 fully expanded leaf 0.83 >More info 0.83 >More info Control for tissue data fully expanded leaf Original data
103 Cotyledons 0.83 >More info 0.82 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
104 differentiating xylem 0.82 >More info 0.83 >More info Control for tissue data xylem Original data GEO bulk
105 torpedo-meristem 0.81 >More info 0.84 >More info Control for tissue data torpedo embryo meristem tissue Original data GEO bulk
106 Distal half (leaf7) 0.83 >More info 0.82 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
107 EL (leaves 1-2) 14DAS 0.82 >More info 0.83 >More info Control for tissue data Original data GEO bulk
108 Stamen stage15 0.82 >More info 0.83 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
109 B5 +AA -0.82 >More info -0.83 >More info B5 -AA B5 media and treated with AA Original data
110 leaf 0.82 >More info 0.83 >More info Control for tissue data leaf Original data GEO bulk
111 phloem sieve cells and companion cells 0.82 >More info 0.83 >More info Control for tissue data phloem Original data GEO bulk
112 Sepals stage15 0.82 >More info 0.83 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
113 Col dryseed 0.82 >More info 0.83 >More info Control for tissue data dry seeds Original data
114 Senescing leaf 0.82 >More info 0.83 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
115 seed during stratification 1 h S 0.83 >More info 0.82 >More info Control for tissue data seed Original data GEO bulk
116 Cauline leaves 0.82 >More info 0.83 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
117 torpedo-root 0.81 >More info 0.83 >More info Control for tissue data Original data GEO bulk
118 mature endodermis glcal 0.82 >More info 0.82 >More info Control for tissue data endodermis Original data GEO bulk
119 Rosette leaf No2 0.82 >More info 0.82 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
120 NAA +AA -0.82 >More info -0.82 >More info NAA -AA B5 media supplemented with 4.5 µM NAA and treated with AA Original data
121 ML (Mature leaves) 35DAS 0.82 >More info 0.81 >More info Control for tissue data Original data GEO bulk
122 pollen 0.80 >More info 0.82 >More info Control for tissue data pollen grain Original data GEO bulk
123 Mature pollen 0.80 >More info 0.81 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
124 Emwa1 inoculated psk 3 dpi 0.81 >More info 0.80 >More info Emwa1 inoculated WT 3 dpi Cotyledons Original data GEO bulk
125 pskr1-5 0.81 >More info 0.79 >More info wild type Cotyledons Original data GEO bulk
126 in vitro pollen tube 0.80 >More info 0.79 >More info Control for tissue data pollen tube Original data
127 seed germinating in countinuous light 24h SL 0.83 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
128 Shoot apex inflorescence (after bolting) 0.83 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
129 Salicylic Acid 3 h -0.81 >More info -0.66 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
130 L17 phyA line -0.80 >More info -0.61 >More info WT seedling Original data GEO bulk
131 chalazal seed coat heart stage 0.87 >More info 0.35 >More info Control for tissue data chalazal seed coat captured by LCM Original data GEO bulk
132 Nuclei whole embryo 0.83 >More info 0.10 >More info Control for tissue data whole embryo Original data
133 torpedo-apical 0.82 >More info 0.11 >More info Control for tissue data torpedo embryo apical tissue Original data GEO bulk
134 chalazal endosperm linear-cotyledon -0.32 >More info -0.60 >More info whole seeds linear-cotyledon Original data GEO bulk
135 QC pSCR 3h BL 0.34 >More info 0.54 >More info QC pSCR 0h BL brassinosteroid root Original data
136 columella control 0.84 >More info 0.04 >More info Control for tissue data mock columella Original data GEO bulk
137 chalazal endosperm pre-globular -0.36 >More info -0.50 >More info whole seed sections pre-globular Original data GEO bulk
138 C2H2 ZF TDNA mutant -0.50 >More info -0.35 >More info Col-WT mature pollen Original data GEO bulk
139 Heat shock optimum 0.19 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
140 Col BTH 0.16 >More info 0.67 >More info Col rosettes Original data GEO bulk
141 2h KNO3 Whole root 0.53 >More info 0.29 >More info 2h KCl control Whole root Whole root Original data GEO bulk
142 4xX2x interploidy cross 0.22 >More info 0.58 >More info 2xX2x cross Original data GEO bulk
143 erf104-ko Flg22 4h -0.55 >More info -0.24 >More info erf104-ko H2O 4h Original data GEO bulk
144 cellularized endosperm linear-cotyledon -0.21 >More info -0.58 >More info whole seeds linear-cotyledon Original data GEO bulk
145 tcp13/+ tcp14/+ 0.23 >More info 0.55 >More info WT inflorescences Original data GEO bulk
146 embryo proper linear-cotyledon -0.21 >More info -0.56 >More info whole seeds linear-cotyledon Original data GEO bulk
147 torpedo-cotyledon 0.81 >More info -0.09 >More info Control for tissue data Original data GEO bulk
148 sfr3 cold -0.51 >More info -0.17 >More info WT-cold aerial tissues Original data GEO bulk
149 Laer pretreat GA Flg22 1h -0.03 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
150 mpk6-ko H2O 4h 0.54 >More info 0.13 >More info Col-0 H2O 4h Original data GEO bulk
151 bri1-116 -0.09 >More info 0.73 >More info Col seedling Original data GEO bulk
152 xyl-grown cell culture- 1h 1mM Suc -0.06 >More info -0.58 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
153 WT roots - Fe -0.07 >More info -0.55 >More info WT roots + Fe Roots Original data GEO bulk
154 TNT-seedlings 0.08 >More info 0.53 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
155 Col0-PsmES4326-24hpi -0.02 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
156 35S::ERF104 H2O 4h 0.50 >More info 0.08 >More info Col-0 H2O 4h Original data GEO bulk
157 siliques AtHb1 control 0.05 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
158 pft1 23C 0.05 >More info 0.52 >More info WT 23C seedling Original data GEO bulk
159 Leafminer damaged seedlings -0.00 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
160 rrd1 IBA 0.04 >More info 0.51 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
161 CCA1-ox 6am non-polysomal -0.03 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
162 IAA7mII over-expressor IAA Treated -0.30 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk