4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Indigo Carmine 0.5 uM
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List of experiments correlated with "Indigo Carmine 0.5 uM"  Help Download transcriptome of top 30
Score Experiment Correlation from
Indigo Carmine 0.5 uM		 Correlation to
Indigo Carmine 0.5 uM		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Indigo Carmine 0.5 uM 1.00 >More info 1.00 >More info Control MV and IC Indigo Carmine Original data
2 Methyl Violet 0.5 uM 0.77 >More info 0.75 >More info Control MV and IC Methyl Violet Original data
3 SCR 48hr-S -0.78 >More info -0.46 >More info SCR 0hr endodermis Original data
4 SCR 72hr-S -0.79 >More info -0.40 >More info SCR 0hr endodermis Original data
5 SCR 24hr-S -0.75 >More info -0.43 >More info SCR 0hr endodermis Original data
6 3m.KNO3 0.65 >More info 0.50 >More info To. KNO3 14 day old Roots Original data GEO bulk
7 SCR 96hr-S -0.74 >More info -0.41 >More info SCR 0hr endodermis Original data
8 red illumination +lincomycin -0.49 >More info -0.65 >More info red illumination -lincomycin Original data GEO bulk
9 6m.KCl 0.62 >More info 0.47 >More info To. KCl 14 day old Roots Original data GEO bulk
10 3m.KCl 0.63 >More info 0.44 >More info To. KCl 14 day old Roots Original data GEO bulk
11 6m.KNO3 0.62 >More info 0.45 >More info To. KNO3 14 day old Roots Original data GEO bulk
12 IAA7mII over-expressor IAA Treated 0.34 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
13 Dex-rga(delta17) 2h GA4 0.59 >More info 0.39 >More info Vector 4h GA4 shoots Original data GEO bulk
14 cat2-2; 0h switch to ambient CO2 concentrations; -0.44 >More info -0.54 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
15 rrd2 IBA 0.58 >More info 0.39 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
16 bri1-116 0.24 >More info 0.73 >More info Col seedling Original data GEO bulk
17 GO5; 0h switch to ambient CO2 concentrations; -0.77 >More info -0.16 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
18 ulp1c ulp1d 0.61 >More info 0.31 >More info col Original data GEO bulk
19 bZIP1ko mutant N+Light+ 0.37 >More info 0.54 >More info WT-sib N+Light+ whole plant Original data GEO bulk
20 afb3-1 2h KCl -0.40 >More info -0.50 >More info Ws 2h KCl 2 hours of 5 mM KCl Arabidopsis root Original data GEO bulk
21 atmyc2 Seedling Dark 0.50 >More info 0.39 >More info WT Seedling Dark Original data GEO bulk
22 Dex-rga(delta17) 4h GA4 0.57 >More info 0.31 >More info Vector 4h GA4 shoots Original data GEO bulk
23 Shoot apex inflorescence (after bolting) 0.20 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
24 eto1-4 +370 0.64 >More info 0.19 >More info eto1-4 whole seedling Original data GEO bulk
25 P.syringae vir 4 h (leaf) -0.63 >More info -0.20 >More info Mock 4 h (leaf) Original data Elicitor treatments
26 root cells cortex -Fe 0.57 >More info 0.26 >More info whole roots standard Original data GEO bulk
27 ABA 24h 0.61 >More info 0.22 >More info EtOH 24h 24hr Original data GEO bulk
28 Base wox4 0.53 >More info 0.27 >More info Base Col base of stem Original data GEO bulk
29 control leaf (cmt 1d) 0.51 >More info 0.27 >More info control leaf (WT 1d) rosette leaf only Original data GEO bulk
30 Hydrogen Peroxide 500 uM -0.55 >More info -0.22 >More info Control RB and PER Hydrogen Peroxide Original data
31 Genotoxic Stress 3 h (shoot) -0.51 >More info -0.25 >More info Stress mock 3 h (shoot) Original data Stress treatments
32 seed germinating in countinuous light 24h SL 0.09 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
33 root hypoxia pWOL -0.51 >More info -0.24 >More info root hypoxia total hypoxia root Original data GEO bulk
34 root - 08% oxygen - 2h 0.53 >More info 0.21 >More info root - 21% oxygen - 2h Original data GEO bulk
35 A. halleri control-root -0.56 >More info -0.15 >More info A. petraea control-root Original data GEO bulk
36 cngc1 -0.54 >More info -0.17 >More info Ws-2 Seedlings Original data GEO bulk
37 Heat shock optimum 0.05 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
38 Inflorescences Trp1 -0.11 >More info -0.59 >More info Inflorescences ler inflorescences Original data GEO bulk
39 PNO8 12 h 0.14 >More info 0.55 >More info Mock 12 h Original data Effect of other inhibitors on seedlings
40 seedling 6h after Gamma atm-1 0.61 >More info 0.08 >More info seedling day 1 unirradiated atm-1 6h Original data
41 roottip control p35S -0.51 >More info -0.18 >More info roottip control total control roottip Original data GEO bulk
42 Dex-rga(delta17) 2h GA4+DEX 0.58 >More info 0.11 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
43 ulp1c ulp1d +Pto -0.54 >More info -0.14 >More info ulp1c ulp1d mock Original data GEO bulk
44 Laer pretreat GA Flg22 1h -0.03 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
45 20m.KNO3 -0.50 >More info -0.17 >More info To. KNO3 14 day old Roots Original data GEO bulk
46 naxillin 6h 0.52 >More info 0.15 >More info before treatment naxillin root Original data GEO bulk
47 GA4 3 h (ga1 seed) -0.60 >More info -0.05 >More info Mock 3 h Original data Effect of gibberellin during seed imbibition
48 35S:VND7-VP16-GR+CHX -0.14 >More info -0.51 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
49 Dex-rga(delta17) 4h GA4+DEX 0.53 >More info 0.11 >More info Vector 4h GA4+DEX shoots Original data GEO bulk
50 seu-3 ant-1 0.61 >More info 0.03 >More info Col-0 Original data GEO bulk
51 Leafminer damaged seedlings 0.08 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
52 eto1-4 +393 0.56 >More info 0.07 >More info eto1-4 whole seedling Original data GEO bulk
53 4x 0.57 >More info 0.06 >More info 2x two week old seedlings Original data
54 hira-protoplast -0.50 >More info -0.12 >More info WT-protoplast protoplast Original data
55 Col-0 Root 100 mM ATP 30 min 0.52 >More info 0.10 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
56 CCA1-ox 6am non-polysomal 0.11 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
57 estradiole-induced ANAC092 -0.56 >More info -0.04 >More info transgenic (empty vector inducible system) Original data GEO bulk
58 auxin and brassinazole seedlings -0.57 >More info -0.03 >More info auxin seedlings Original data GEO bulk
59 pab nonpolysome -0.65 >More info 0.05 >More info WT nonpolysome seedling shoot/aerial seedling Original data
60 rpl24 total 0.53 >More info 0.05 >More info WT total seedling shoot/aerial seedling Original data
61 root columella root cap -S -0.50 >More info -0.07 >More info root columella root cap pH5.7 Original data GEO bulk
62 roots WT 0uM Fe -0.51 >More info -0.05 >More info roots WT 100uM Fe 0uM Fe roots Original data GEO bulk
63 ahg1-1 -0.60 >More info 0.06 >More info ABA control Original data GEO bulk
64 35S:GIF 0.50 >More info 0.01 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
65 eto1-4 +303 0.53 >More info -0.02 >More info eto1-4 whole seedling Original data GEO bulk
66 2hr KCl control SR cell 0.51 >More info -0.04 >More info 2hr KCl control PrR cell Stele root cells Original data GEO bulk
67 eto1-4 + AVG 0.50 >More info -0.03 >More info eto1-4 whole seedling Original data GEO bulk
68 camta1/2/3 warm -0.50 >More info 0.04 >More info WT warm entire aerial part Original data GEO bulk
69 Col0-PsmES4326-24hpi -0.15 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
70 3x(p) 0.52 >More info -0.08 >More info 2x two week old seedlings Original data
71 camta2/3 warm -0.53 >More info 0.10 >More info WT warm entire aerial part Original data GEO bulk
72 -Sulfate 24 h 0.50 >More info -0.07 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
73 Mutant NahG(leaf) 0.53 >More info -0.11 >More info Col-0 (leaf) Original data GEO bulk
74 torpedo-cotyledon 0.50 >More info -0.09 >More info Control for tissue data Original data GEO bulk
75 Col BTH -0.27 >More info 0.67 >More info Col rosettes Original data GEO bulk
76 npr1 sni1 brca2a SA -0.50 >More info 0.18 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
77 siliques AtHb1 control -0.40 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk