4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on whole roots -Fe 12 hour
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List of experiments correlated with "whole roots -Fe 12 hour"  Help Download transcriptome of top 30
Score Experiment Correlation from
whole roots -Fe 12 hour		 Correlation to
whole roots -Fe 12 hour		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 whole roots -Fe 12 hour 1.00 >More info 1.00 >More info whole roots standard Original data GEO bulk
2 whole roots -Fe 24hour 0.91 >More info 0.89 >More info whole roots standard Original data GEO bulk
3 Fe starvation 24 h 0.91 >More info 0.89 >More info Control Original data GEO bulk
4 whole roots -Fe 6 hour 0.92 >More info 0.87 >More info whole roots standard Original data GEO bulk
5 whole roots -Fe 3 hour 0.74 >More info 0.76 >More info whole roots standard Original data GEO bulk
6 Fe starvation 3 h 0.74 >More info 0.76 >More info Control Original data GEO bulk
7 root longitudinal zone-4 -Fe 0.58 >More info 0.63 >More info root longitudinal zone-4 standard Original data GEO bulk
8 whole roots -Fe 72 hour 0.62 >More info 0.57 >More info whole roots standard Original data GEO bulk
9 Fe starvation 72 h 0.62 >More info 0.57 >More info Control Original data GEO bulk
10 whole roots -Fe 48 hour 0.66 >More info 0.53 >More info whole roots standard Original data GEO bulk
11 Col-0 0h NAA 0.60 >More info 0.57 >More info Col-0 6h MOCK Original data GEO bulk
12 ABA 1 h 0.41 >More info 0.76 >More info Mock 1 h Original data Basic hormone treatment of seedlings
13 ABA 0.5 h 0.50 >More info 0.60 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
14 T101A 10mM NH4NO3 -0.52 >More info -0.54 >More info col 10mM NH4NO3 Root Original data
15 chl1-9 10mM NH4NO3 -0.60 >More info -0.45 >More info col 10mM NH4NO3 Root Original data
16 chl1-5 10mM NH4NO3 -0.56 >More info -0.43 >More info col 10mM NH4NO3 Root Original data
17 root cells cortex -Fe 0.71 >More info 0.26 >More info whole roots standard Original data GEO bulk
18 WT seedlings NaCl 0.54 >More info 0.38 >More info WT seedlings control Seedlings Original data GEO bulk
19 root cells stele 140mM NaCl 48 hours 0.54 >More info 0.37 >More info root cells stele standard 1 hour root cells stele Original data
20 IAA 1h -0.66 >More info -0.25 >More info control 1h root Original data GEO bulk
21 ein2-1 +Pep2 2h 0.53 >More info 0.37 >More info WT +Pep2 2h Pep2 Original data GEO bulk
22 root longitudinal zone-4 NaCl 0.29 >More info 0.61 >More info root longitudinal zone-4 Original data GEO bulk
23 root cells endodermis and quiescent center -Fe 0.54 >More info 0.35 >More info whole roots standard Original data GEO bulk
24 Heat shock optimum 0.24 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
25 TNT-seedlings 0.20 >More info 0.69 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
26 slr-1 0h NAA -0.38 >More info -0.50 >More info Col-0 0h NAA Original data GEO bulk
27 CeO2 germinant -0.23 >More info -0.65 >More info Millipore Water germinant CeO2 seedling Original data
28 root cells -Fe 0.65 >More info 0.22 >More info whole roots standard Standard media transferred to -Fe media for 24 hours prior to harvesting tissue Original data GEO bulk
29 root cells epidermis and lateral root cap -Fe 0.61 >More info 0.26 >More info whole roots standard Original data GEO bulk
30 root cells columella root cap -Fe 0.56 >More info 0.30 >More info whole roots standard Original data GEO bulk
31 NaCl Col 0.36 >More info 0.50 >More info Col Original data GEO bulk
32 SQ8 roots 2hr KCl control 0.57 >More info 0.28 >More info Col0 roots 2hr KCl control root Original data GEO bulk
33 Chemically 0.16 >More info 0.68 >More info Solvent treated for 24 h with 5 μM 2-(2 4-dichlorophenoxy)-N-[4-(isobutyrylamino)-3-methoxyphenyl]propanamid whole seedlings Original data
34 root cells stele -Fe 0.65 >More info 0.18 >More info whole roots standard Original data GEO bulk
35 2hr continuous KNO3 ECR cell -0.28 >More info -0.55 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
36 Col0-PsmES4326-24hpi 0.21 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
37 1.5 hr nitrate -0.55 >More info -0.26 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
38 Laer pretreat GA Flg22 1h 0.10 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
39 IAA 4h -0.55 >More info -0.24 >More info control 4h root Original data GEO bulk
40 whole roots -Fe 0.77 >More info 0.02 >More info whole roots standard Standard media transferred to -Fe media for 24 hours prior to harvesting tissue Original data GEO bulk
41 2hr continuous KNO3 and MSX PeR cell -0.23 >More info -0.56 >More info 2hr continuous KCl and MSX control PeR cell Pericycle root cells Original data GEO bulk
42 root cells endodermis 140mM NaCl 3 hours 0.28 >More info 0.50 >More info root cells endodermis standard 1 hour root cells endodermis Original data
43 bak1-3 untreated -0.50 >More info -0.27 >More info WT untreated untreated Original data GEO bulk
44 ein3 eil1 0.55 >More info 0.22 >More info Col-0 mock Whole seedling Original data GEO bulk
45 bbx24 in Simulated Shade -0.19 >More info -0.58 >More info WT in simulated shade shade seedling Original data
46 ckh1 CK0 0.51 >More info 0.24 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D in the absence of kinetin. tissue culture Original data GEO bulk
47 EBE-XVE +estradiol -0.52 >More info -0.22 >More info WT-Col-0 +estradiol shoot Original data GEO bulk
48 IAA7mII over-expressor IAA Treated 0.05 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
49 IAA 8h -0.56 >More info -0.17 >More info control 8h root Original data GEO bulk
50 Cs root 0.61 >More info 0.12 >More info control root Original data GEO bulk
51 12h-DC3000 avrRpm1 0.05 >More info -0.78 >More info 12h-DC3000 leaves Original data GEO bulk
52 miR mutant (higher order mutant) -0.66 >More info -0.05 >More info col control (higher order mutant) Original data GEO bulk
53 IAA 2h -0.59 >More info -0.12 >More info control 2h root Original data GEO bulk
54 gul2-1 bri1-5 mutant -0.59 >More info -0.11 >More info WT 7 day-old whole seedlings Original data
55 WT H2O2 3h 0.52 >More info 0.16 >More info WT water 3h 3h_H2O2 Original data GEO bulk
56 Leafminer damaged seedlings 0.12 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
57 whole roots 140 mM NaCl 30 minutes 0.15 >More info 0.51 >More info whole roots standard Original data GEO bulk
58 WUS-GR DEX Cycloheximide DEX 0.50 >More info 0.15 >More info WUS-GR DEX Cycloheximide Cycloheximide Dexamethasone Original data GEO bulk
59 cpctry 0.13 >More info 0.52 >More info Col Original data GEO bulk
60 Col BTH -0.02 >More info 0.67 >More info Col rosettes Original data GEO bulk
61 Col-0 overexpressing At1g54160 control 0.56 >More info 0.07 >More info WT no treatement Original data GEO bulk
62 At1g54160 ox 0.56 >More info 0.07 >More info Col-0 Original data GEO bulk
63 hexa mutant (higher order mutant) -0.51 >More info -0.11 >More info col control (higher order mutant) Original data GEO bulk
64 iron minus 24h 0.03 >More info 0.59 >More info iron +24h root Original data GEO bulk
65 upb1-1 elongation zone -0.08 >More info -0.54 >More info Col-0 elongation zone Seedling root elongation zone Original data GEO bulk
66 GR:KAN1 DEX Shade 0.52 >More info 0.09 >More info GR:KAN1 Mock Shade seedlings Original data
67 AgNO3 3 h 0.08 >More info 0.52 >More info Mock 3 h Original data Effect of ethylene inhibitors on seedlings
68 Shoot apex inflorescence (after bolting) -0.05 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
69 siliques AtHb1 control 0.06 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
70 bri1-116 -0.16 >More info 0.73 >More info Col seedling Original data GEO bulk
71 Mutant axr3-1 (IAA) -0.04 >More info 0.60 >More info Col (IAA) Original data GEO bulk
72 CCA1-ox 6am non-polysomal 0.04 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
73 MG132 3 h -0.02 >More info 0.55 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
74 -Sulfate 2 h 0.52 >More info -0.00 >More info Mock 2 h (1500uM sulfate) Original data Response to sulfate limitation
75 toc1-1-73hr 0.02 >More info 0.50 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
76 seed germinating in countinuous light 24h SL -0.17 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
77 dsr1 0.50 >More info -0.09 >More info WT mock Whole seedling Original data GEO bulk
78 spores of Gigaspora rosea -0.57 >More info 0.22 >More info Control Original data GEO bulk