4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on cca1-lhy before light
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List of experiments correlated with "cca1-lhy before light"  Help Download transcriptome of top 30
Score Experiment Correlation from
cca1-lhy before light		 Correlation to
cca1-lhy before light		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 cca1-lhy before light 1.00 >More info 1.00 >More info before light whole seedlings Original data GEO bulk
2 cca1-lhy 15m light 0.96 >More info 0.88 >More info 15m light whole seedlings Original data GEO bulk
3 cca1-lhy 30m light 0.93 >More info 0.82 >More info 30m light whole seedlings Original data GEO bulk
4 cca1-lhy 60m light 0.86 >More info 0.75 >More info 60m light whole seedlings Original data GEO bulk
5 seedling 24h after Gamma atm-1 -0.57 >More info -0.63 >More info seedling day 2 unirradiated atm-1 24h Original data
6 toc1-1-73hr 0.70 >More info 0.48 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
7 seedling 1.5h after HZE atm-1 0.62 >More info 0.55 >More info seedling day 1 unirradiated atm-1 1.5h Original data
8 seedling 24h after Gamma WT -0.60 >More info -0.56 >More info seedling day 2 unirradiated WT 24h Original data
9 Day Time Treatment -0.54 >More info -0.60 >More info Day Time Control 1hr white light pulse aerial rosette Original data
10 ptpks2 -0.47 >More info -0.67 >More info Col-WT leaves Original data GEO bulk
11 sdg8-2 mutant -0.65 >More info -0.47 >More info wild type leaf Original data GEO bulk
12 35S:LOB-GR mock -0.48 >More info -0.64 >More info Col mock mock seedling Original data GEO bulk
13 Shoot dark control 7h 0.55 >More info 0.56 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
14 seedling 1.5h after HZE WT 0.63 >More info 0.48 >More info seedling day 1 unirradiated WT 1.5h Original data
15 atmyc2 Seedling BL 0.57 >More info 0.53 >More info WT Seedling BL Original data GEO bulk
16 tmm1-inflorescence-tips -0.51 >More info -0.59 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
17 COL-0-Fe--shoot -0.69 >More info -0.39 >More info COL-0-Ctrl--shoot shoot Original data
18 essp4/sdg8-5 mutant -0.62 >More info -0.45 >More info wild type leaf Original data GEO bulk
19 short 17-degree- -0.44 >More info -0.63 >More info control short Original data GEO bulk
20 sfr6 control -0.58 >More info -0.47 >More info WT control All aerial tissue Original data GEO bulk
21 Shoot dark control 24h 0.50 >More info 0.54 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
22 Wounding Stress3 h (shoot) -0.56 >More info -0.46 >More info Stress mock 3 h (shoot) Original data Stress treatments
23 WT Na2S -0.57 >More info -0.44 >More info WT water Na2S leaf Original data GEO bulk
24 4h decapitation -0.63 >More info -0.38 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
25 Col in Pi deficiency medium -0.28 >More info -0.73 >More info Col in control medium root Original data GEO bulk
26 B.cinerea 18 h infection -0.25 >More info -0.75 >More info Mock 18 h Original data Botrytis cinerea infection
27 Botrytis cinerea 18h -0.25 >More info -0.75 >More info control 18h Original data GEO bulk
28 Nicotinamide-93hr 0.61 >More info 0.38 >More info WT-untreated-93hr nicotinamide aerial tissue Original data GEO bulk
29 penta mutant (higher order mutant) 0.50 >More info 0.48 >More info col control (higher order mutant) Original data GEO bulk
30 lht1 untreated -0.46 >More info -0.52 >More info WT untreated untreated leaf Original data GEO bulk
31 6h volatiles Sm. R3089 0.44 >More info 0.54 >More info 6h untreated whole seedling Original data GEO bulk
32 phr1 phl1 Shoot-Pi 0.55 >More info 0.42 >More info WT Shoot-Pi shoots Original data GEO bulk
33 0h light (+Lincomycin) -0.59 >More info -0.38 >More info 0h light (-Lincomycin) seedlings Original data GEO bulk
34 WT-Dry -0.39 >More info -0.58 >More info WT-CK dehydration treatment 1h Original data
35 Cocultivation 8 hrs leaf 0.37 >More info 0.60 >More info Mock cocultivation 8 hrs leaf Leaf Original data
36 WT NAA 2h 0.41 >More info 0.54 >More info WT 0h Leaf tissue Original data GEO bulk
37 IRP1-OE-Ctrl--shoot -0.43 >More info -0.50 >More info COL-0-Ctrl--shoot shoot Original data
38 pip3 At2g19270 TDNA 9 0.36 >More info 0.56 >More info Col-0 whole plant Original data GEO bulk
39 WT hypoxia 0.37 >More info 0.55 >More info WT normoxia whole rosette Original data
40 Dark 6h hml 0.54 >More info 0.37 >More info 0h hml Original data
41 Dark 6h ivd 0.52 >More info 0.39 >More info 0h ivd Original data
42 Dark 6h wt 0.55 >More info 0.36 >More info 0h wt Original data
43 Night Time Treatment -0.40 >More info -0.51 >More info Night Time Control 1hr white light pulse aerial rosette Original data
44 gun1-9 control -0.38 >More info -0.52 >More info Col-0 control Original data GEO bulk
45 hepta mutant (higher order mutant) 0.61 >More info 0.28 >More info col control (higher order mutant) Original data GEO bulk
46 Leafminer damaged seedlings 0.32 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
47 gun1gun5 drak pretreated 0.50 >More info 0.38 >More info WT drak pretreated Original data GEO bulk
48 max3GR24 (1 uM) -0.57 >More info -0.31 >More info max3 seedlings DMSO (mock) whole seedlings Original data GEO bulk
49 24h volatiles Sm. R3089 0.30 >More info 0.58 >More info 24h untreated whole seedling Original data GEO bulk
50 35S:VND7-VP16-GR+DEX +CHX 0.32 >More info 0.55 >More info 35S:VND7-VP16-GR+CHX 10mM cycloheximide (CHX) 2hrs followed by 10mM dexamethazone (DEX) 4hrs whole seedlings Original data GEO bulk
51 WT mitomycin C -0.52 >More info -0.34 >More info WT mock shoot apical meristem Original data
52 seedlings by volatiles from leafminer damaged
Lima bean 48h		 -0.34 >More info -0.52 >More info seedlings by volatiles from healthy Lima bean 48h leaves Original data GEO bulk
53 hog1-7 -0.60 >More info -0.26 >More info wt whole seedling Original data GEO bulk
54 mutant-line774 -0.60 >More info -0.26 >More info WT-control whole plant Original data GEO bulk
55 Heat shock optimum 0.20 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
56 Laer pretreat GA Flg22 1h 0.14 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
57 Whole root - S 3H -0.22 >More info -0.63 >More info Whole root - S 0H Original data GEO bulk
58 rdr1-1 -0.54 >More info -0.30 >More info Col-0 Original data GEO bulk
59 Col-0 WT HL 3h -0.34 >More info -0.50 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
60 gai Flg22 2h 0.51 >More info 0.32 >More info Laer Flg22 2h leaf discs Original data GEO bulk
61 ein2 1% sucrose 14-day-old -0.29 >More info -0.54 >More info Col-0 1% sucrose 14-day-old Original data GEO bulk
62 bri1-116 0.10 >More info 0.73 >More info Col seedling Original data GEO bulk
63 Leafminer systemically damaged thaliana seedlings 0.62 >More info 0.20 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
64 Col BTH 0.15 >More info 0.67 >More info Col rosettes Original data GEO bulk
65 Root dark control 7h 0.51 >More info 0.30 >More info Root light control non-submerged dark condition for 7 hours whole root Original data GEO bulk
66 dark +H2O2 0.31 >More info 0.50 >More info dark 5 mM H2O2 seedling Original data GEO bulk
67 cdkf:1-2 -0.50 >More info -0.30 >More info wt seedling young seedlings Original data GEO bulk
68 essp3/brm5 mutant -0.50 >More info -0.30 >More info WT (Pro-beta-CG;GUS) Original data GEO bulk
69 spch 0.30 >More info 0.50 >More info Col-0 WT whole seedling Original data GEO bulk
70 sid2 0.28 >More info 0.51 >More info Col rosettes Original data GEO bulk
71 Root dark control 24h 0.50 >More info 0.28 >More info Root light control non-submerged dark condition for 24 hours whole root Original data GEO bulk
72 hen1 -0.50 >More info -0.27 >More info Ler Original data GEO bulk
73 FarRed Light 45min 0.25 >More info 0.52 >More info White Light 45min Original data Light treatments
74 xyl-grown cell culture- 1h 1mM Suc -0.24 >More info -0.53 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
75 swn-7 0.63 >More info 0.12 >More info Col whole plant Original data GEO bulk
76 Dry pre-dawn -0.21 >More info -0.53 >More info Wet pre-dawn water-limited whole rosette Original data GEO bulk
77 ACC 1 h 0.23 >More info 0.50 >More info Mock 1 h Original data Basic hormone treatment of seedlings
78 35S::HRE2 Aerobic 0.54 >More info 0.17 >More info Col-0 wt Aerobic untreated control Original data GEO bulk
79 FAMA induced 48h -0.50 >More info -0.21 >More info control 48h Whole seedling Original data GEO bulk
80 roots bhlh100/101 0uM Fe 0.52 >More info 0.19 >More info roots WT 0uM Fe 0uM Fe roots Original data GEO bulk
81 phyB mutant 16C 4hrs 0.20 >More info 0.51 >More info 16C 4hs whole plant excluding roots Original data GEO bulk
82 Whole root - S 12H -0.19 >More info -0.52 >More info Whole root - S 0H Original data GEO bulk
83 Nicotinamide-69hr 0.51 >More info 0.19 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
84 miR mutant (higher order mutant) 0.53 >More info 0.16 >More info col control (higher order mutant) Original data GEO bulk
85 M6PR transgenic leaf 100mM NaCl 0.19 >More info 0.50 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
86 Ler KAR1 24h seed -0.07 >More info -0.61 >More info Ler WATER 24h seed KAR1 seed Original data GEO bulk
87 dcl1-7 -0.50 >More info -0.17 >More info Ler Original data GEO bulk
88 tfl1-1-23ºC 0.56 >More info 0.10 >More info WT-23ºC Original data GEO bulk
89 siliques AtHb1 control 0.13 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
90 seedling 3h after HZE WT 0.60 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
91 tunicamycin 0.09 >More info 0.53 >More info DMF Original data GEO bulk
92 IAA7mII over-expressor IAA Treated -0.07 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
93 seed germinating in countinuous light 24h SL -0.06 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
94 mutant-line1135 -0.53 >More info -0.07 >More info WT-control whole plant Original data GEO bulk
95 ddm1-12 -0.53 >More info -0.07 >More info wt whole seedling Original data GEO bulk
96 aba3-1 -0.07 >More info -0.53 >More info wt Original data GEO bulk
97 AtMinD1 Prolonged-induction 0.52 >More info 0.08 >More info Control whole plant Original data GEO bulk
98 Col0-PsmES4326-24hpi -0.02 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
99 opr3 OPDA 0.5 h 0.02 >More info -0.59 >More info opr3 0 h Original data GEO bulk
100 Shoot apex inflorescence (after bolting) -0.09 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
101 Light 0.03 >More info -0.57 >More info Control Original data GEO bulk
102 seedling 6h after Gamma WT 0.51 >More info 0.02 >More info seedling day 1 unirradiated WT 6h Original data
103 CCA1-ox 6am non-polysomal 0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
104 Shoot submergence 7h 0.50 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
105 t-zeatin 0.5 h -0.04 >More info 0.52 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
106 abh1 +ABA -0.53 >More info 0.06 >More info Col-0 +ABA Original data GEO bulk
107 amiRAP aerobic -0.51 >More info 0.05 >More info WT aerobic aerobic Original data GEO bulk
108 A. halleri highZn-leaf -0.12 >More info 0.51 >More info A. petraea highZn-leaf Original data GEO bulk
109 4d red light grown hmr-22 seedlings 0.55 >More info -0.21 >More info 4d red light grown WT(Col-0) seedlings Original data