4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on F1 whole seedlings root
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List of experiments correlated with "F1 whole seedlings root"  Help Download transcriptome of top 30
Score Experiment Correlation from
F1 whole seedlings root		 Correlation to
F1 whole seedlings root		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 F1 whole seedlings root 1.00 >More info 1.00 >More info Col whole seedlings root Seedlings Original data GEO bulk
2 aln-1 -0.75 >More info -0.74 >More info Col-0 Aerial part of seedlings Original data
3 rpl24 total 0.57 >More info 0.53 >More info WT total seedling shoot/aerial seedling Original data
4 shoot hypoxia p35S 0.39 >More info 0.67 >More info shoot hypoxia total Original data GEO bulk
5 C24 24h cold 0.72 >More info 0.32 >More info Col 24h cold leaf Original data GEO bulk
6 shoot control p35S 0.39 >More info 0.65 >More info shoot control total Original data GEO bulk
7 rpl24 polysome 0.52 >More info 0.51 >More info WT polysome seedling shoot/aerial seedling Original data
8 Lip0 UV 0.40 >More info 0.62 >More info Lip0 mock UV seedling Original data
9 eif3h 0.50 >More info 0.51 >More info WT Original data GEO bulk
10 Mock pft1 leaf 0.29 >More info 0.70 >More info Mock Col-0 leaf water leaf Original data GEO bulk
11 ALC Toc1 light-light Mock -0.45 >More info -0.52 >More info Col light-light Mock no ethanol Original data GEO bulk
12 triploid female excess -0.50 >More info -0.44 >More info tetraploid Original data GEO bulk
13 C24 UV1 -0.58 >More info -0.34 >More info C24 mock UV seedling Original data
14 Apex BLS>>TCP4 14DAS 0.39 >More info 0.52 >More info Apex Col 14DAS Original data GEO bulk
15 M6PR transgenic 100mM NaCl -0.35 >More info -0.56 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
16 an3-4 leaf primordia 0.41 >More info 0.50 >More info WT leaf primordia Original data GEO bulk
17 eif3h polysome 0.50 >More info 0.39 >More info WT polysome Original data GEO bulk
18 Ba1 UV 0.35 >More info 0.52 >More info Ba1 mock UV seedling Original data
19 Infected pft1 leaf 0.17 >More info 0.69 >More info Infected Col-0 leaf F. oxysporum leaf Original data GEO bulk
20 Cvi SA 0.50 >More info 0.31 >More info Col-0 SA Original data GEO bulk
21 bHLH122 ox -0.25 >More info -0.55 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
22 4xX2x interploidy cross 0.51 >More info 0.28 >More info 2xX2x cross Original data GEO bulk
23 Leafminer damaged seedlings 0.23 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
24 WT 1wk -P 0.21 >More info 0.56 >More info WT 1wk +P No phosphate medium seedlings without roots Original data GEO bulk
25 flu over-tAPX 0.24 >More info 0.50 >More info WT Col Original data GEO bulk
26 vtc1-1 -0.22 >More info -0.52 >More info Col-0 whole plant Original data GEO bulk
27 IAA7mII over-expressor IAA Treated 0.04 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
28 Light 0.15 >More info 0.58 >More info Control Original data GEO bulk
29 seed germinating in countinuous light 24h SL 0.05 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
30 Leaf wounded 0.19 >More info 0.53 >More info Leaf control vegetative leaf Original data GEO bulk
31 35S::PI ap3-3 35S::AP-GR +DEX 0.09 >More info 0.63 >More info 0hr DEX Original data GEO bulk
32 35S::HRE1 Hypoxic -0.20 >More info -0.51 >More info Col-0 wt Hypoxic hypoxic treatment Original data GEO bulk
33 Laer pretreat GA Flg22 1h -0.00 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
34 rcf1-1 cold 24h 0.15 >More info 0.55 >More info WT cold 24h cold at 4°C seedlings Original data GEO bulk
35 opr3 OPDA 0.5 h 0.16 >More info 0.54 >More info opr3 0 h Original data GEO bulk
36 vte2 leaves 0h LT -0.05 >More info -0.65 >More info Col leaves 0h LT h 9-11th adult leaves Original data
37 B.cinerea 18 h infection 0.12 >More info 0.56 >More info Mock 18 h Original data Botrytis cinerea infection
38 Botrytis cinerea 18h 0.12 >More info 0.56 >More info control 18h Original data GEO bulk
39 CDB1-Knockout -0.13 >More info -0.54 >More info WT Original data GEO bulk
40 ex2 flu dark 8hours/30 minute light 0.07 >More info 0.60 >More info col dark 8hours/30 minute light Original data GEO bulk
41 flu dark 8hours/30 minute light 0.04 >More info 0.62 >More info col dark 8hours/30 minute light Original data GEO bulk
42 camta3-2 0.08 >More info 0.56 >More info WT Original data GEO bulk
43 WT drought 0.10 >More info 0.54 >More info WT control All aerial tissue Original data GEO bulk
44 Whole root - S 3H 0.07 >More info 0.55 >More info Whole root - S 0H Original data GEO bulk
45 flu 0.09 >More info 0.53 >More info WT Col Original data GEO bulk
46 hrpA fliC 7h 0.12 >More info 0.50 >More info Mock 7h hrpA fliC Original data GEO bulk
47 siliques AtHb1 control 0.09 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
48 35S::HRE2 Aerobic -0.09 >More info -0.51 >More info Col-0 wt Aerobic untreated control Original data GEO bulk
49 atmyc2 Seedling BL -0.10 >More info -0.50 >More info WT Seedling BL Original data GEO bulk
50 cat2-2; 8h switch to ambient CO2 concentrations; 0.00 >More info 0.60 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
51 35S:ATR1 like miR -0.07 >More info -0.52 >More info WT for miR Original data GEO bulk
52 GO5; 8h switch to ambient CO2 concentrations; 0.06 >More info 0.53 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
53 pho1 0.03 >More info 0.55 >More info Col2WT Original data GEO bulk
54 Col0-PsmES4326-24hpi -0.03 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
55 WT 3h -P -0.09 >More info 0.66 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
56 Hydrogen Peroxide 500 uM 0.03 >More info 0.54 >More info Control RB and PER Hydrogen Peroxide Original data
57 Shoot apex inflorescence (after bolting) -0.09 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
58 SA 4mM -0.01 >More info 0.56 >More info untreated 4 weeks old at time of treatment whole leaf Original data GEO bulk
59 Col-0 RNAi-MBS2/mbs1-1 HL 3h -0.01 >More info -0.54 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
60 Protoplast Induced 0.04 >More info 0.50 >More info Uninduced Original data GEO bulk
61 sid2 -0.03 >More info -0.51 >More info Col-0-untreated-control untreated leaf tissue Original data GEO bulk
62 tga1 tga4 2h KNO3 -0.01 >More info -0.53 >More info Col 0 2h KNO3 5 mM KNO3 root Original data GEO bulk
63 WT-Dry -0.02 >More info 0.56 >More info WT-CK dehydration treatment 1h Original data
64 35S:RPS4 eds1-2 T0 0.01 >More info 0.52 >More info 35S:RPS4 T0 leaves Original data
65 PNO8 3 h 0.00 >More info 0.52 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
66 CCA1-ox 6am non-polysomal 0.01 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
67 Heat shock optimum -0.15 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
68 Col BTH -0.20 >More info 0.67 >More info Col rosettes Original data GEO bulk
69 xyl-grown cell culture- 1h 1mM Suc -0.19 >More info 0.66 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
70 camta3-1 -0.08 >More info 0.53 >More info WT Original data GEO bulk
71 bio4-1 mutant watered00µM biotin leaves 0.05 >More info -0.50 >More info bio4-1 mutant leaves leaves Original data GEO bulk
72 Elevated CO2 leaf primordia -0.08 >More info 0.52 >More info Ambient CO2 leaf primordia leaf primordia Original data
73 35SAvr -0.11 >More info 0.54 >More info Ecotype Col Original data GEO bulk
74 WT 3H Cold -0.12 >More info 0.54 >More info WT control Original data GEO bulk
75 4C 1h -0.11 >More info 0.53 >More info 4C 0h Original data GEO bulk
76 mp-B4149 mutant IAA 0.52 >More info -0.11 >More info GR-bdl IAA Original data GEO bulk
77 bri1-116 -0.32 >More info 0.73 >More info Col seedling Original data GEO bulk
78 HARAP aerobic 0.15 >More info -0.55 >More info WT aerobic aerobic Original data GEO bulk
79 root longitudinal zone-3 -Fe 0.15 >More info -0.50 >More info root longitudinal zone-3 standard Original data GEO bulk
80 chl1-5 Nitrate 0.5h 0.24 >More info -0.55 >More info WT Nitrate 0.5h Original data GEO bulk