4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on protoplasts T1 [flg22]
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List of experiments correlated with "protoplasts T1 [flg22]"  Help Download transcriptome of top 30
Score Experiment Correlation from
protoplasts T1 [flg22]		 Correlation to
protoplasts T1 [flg22]		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 protoplasts T1 [flg22] 1.00 >More info 1.00 >More info protoplasts T1 [CPK] mesophyll protoplasts Original data GEO bulk
2 protoplasts T2 [flg22] 0.91 >More info 0.91 >More info protoplasts T2 [CPK] mesophyll protoplasts Original data GEO bulk
3 chito-tetramer 0.73 >More info 0.67 >More info Col Mock Original data GEO bulk
4 WT chitooctaose 0.67 >More info 0.65 >More info WT water Original data GEO bulk
5 chito-octamer 0.65 >More info 0.64 >More info Col Mock Original data GEO bulk
6 WT+chitooctaose 0.61 >More info 0.68 >More info WT+water chitooctaose seedlings Original data GEO bulk
7 Chitin 0.65 >More info 0.58 >More info Col C Original data GEO bulk
8 AtLysM RLK1 mutant chitooctaose -0.65 >More info -0.58 >More info WT chitooctaose Original data GEO bulk
9 seedlings protease IV 0.70 >More info 0.48 >More info seedlings nontreated control whole seedling Original data
10 bak1-3 +Pep2 2h 0.51 >More info 0.62 >More info WT +Pep2 2h Pep2 Original data GEO bulk
11 HARAP aerobic -0.59 >More info -0.54 >More info WT aerobic aerobic Original data GEO bulk
12 35S:RPS4 eds1-2 2h -0.49 >More info -0.64 >More info 35S:RPS4 2h leaves Original data
13 Cycloheximide 3 h 0.69 >More info 0.41 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
14 Rose Bengal 0.5 uM 0.57 >More info 0.51 >More info Control RB and PER Rose Bengal Original data
15 1h +Pi -0.51 >More info -0.57 >More info 1h -Pi root Original data GEO bulk
16 ex2 flu dark 8hours/30 minute light 0.64 >More info 0.43 >More info col dark 8hours/30 minute light Original data GEO bulk
17 miR393 flg22 1h 0.64 >More info 0.42 >More info WT 0h Leaf tissue Original data GEO bulk
18 AFB1 flg22 1h 0.63 >More info 0.42 >More info WT 0h Leaf tissue Original data GEO bulk
19 protoplasts T0 [flg22] 0.52 >More info 0.50 >More info protoplasts T0 [CPK] mesophyll protoplasts Original data GEO bulk
20 Full C2 T2 -0.53 >More info -0.49 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
21 gai Flg22 1h -0.74 >More info -0.28 >More info Laer Flg22 1h leaf discs Original data GEO bulk
22 WT flg22 1h 0.60 >More info 0.41 >More info WT 0h Leaf tissue Original data GEO bulk
23 A. thaliana-A. lyrata hybrid -0.55 >More info -0.45 >More info A. thaliana mature leaves before flowering Original data GEO bulk
24 flu dark 8hours/30 minute light 0.58 >More info 0.42 >More info col dark 8hours/30 minute light Original data GEO bulk
25 FLIGHT TAGESB plate6 ROOTS 0.51 >More info 0.49 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
26 Leaf wounded 0.56 >More info 0.44 >More info Leaf control vegetative leaf Original data GEO bulk
27 TNT-seedlings 0.39 >More info 0.58 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
28 atr mock 0.62 >More info 0.34 >More info WT mock shoot apical meristem Original data
29 Col BTH 0.27 >More info 0.67 >More info Col rosettes Original data GEO bulk
30 GR:KAN1 DEX Shade 0.60 >More info 0.34 >More info GR:KAN1 Mock Shade seedlings Original data
31 TaFLS overexpression line (OE2) -0.59 >More info -0.33 >More info Col-0 Rosette leaves Original data
32 4C 1h 0.37 >More info 0.54 >More info 4C 0h Original data GEO bulk
33 WT NAA/flg 1h 0.56 >More info 0.34 >More info WT 0h Leaf tissue Original data GEO bulk
34 atr zebularine 0.60 >More info 0.30 >More info WT zebularine shoot apical meristem Original data
35 Laer Flg22+GA 1h 0.55 >More info 0.32 >More info Laer Control leaf discs Original data GEO bulk
36 anac017-2 AntimycinA 3h -0.59 >More info -0.28 >More info WT AntimycinA 3h 3h_AntimycinA Original data GEO bulk
37 A. lyrata -0.52 >More info -0.35 >More info A. thaliana mature leaves before flowering Original data GEO bulk
38 Light 0.23 >More info 0.64 >More info Control Original data GEO bulk
39 Laer pretreat JA Flg22 0h -0.50 >More info -0.36 >More info Laer pretreat water control leaf discs Original data GEO bulk
40 coi1-16 ein2 sid2 ozone 0.58 >More info 0.28 >More info coi1-16 ein2 sid2 ctrl 350 ppb ozone exposure for 2hr Original data
41 WT AntimycinA 3h 0.58 >More info 0.27 >More info WT water 3h 3h_AntimycinA Original data GEO bulk
42 Leaf systemic 0.52 >More info 0.32 >More info Leaf control vegetative leaf Original data GEO bulk
43 C24 ozone 0.58 >More info 0.26 >More info C24 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
44 Te 1d -0.57 >More info -0.27 >More info Te CA Leaves Original data
45 shoots bhlh100/101 100uM Fe 0.22 >More info 0.62 >More info shoots WT 100uM Fe 100uM Fe shoots Original data GEO bulk
46 Mutant NahG(leaf) -0.53 >More info -0.30 >More info Col-0 (leaf) Original data GEO bulk
47 bZIP1ko mutant N+Light- 0.22 >More info 0.61 >More info WT-sib N+Light- whole plant Original data GEO bulk
48 abi1 hypocotyl 0.25 >More info 0.58 >More info Ler hypocotyl hypocotyl Original data GEO bulk
49 tbf1-mock infiltration -0.55 >More info -0.27 >More info WT-mock infiltration water for 2 hrs (infiltration into leaves) mature leaf Original data GEO bulk
50 bri1-116 0.09 >More info 0.73 >More info Col seedling Original data GEO bulk
51 opr3 OPDA 0.5 h 0.25 >More info 0.57 >More info opr3 0 h Original data GEO bulk
52 9 hr Hypoxia 1 hr recovery Total RNA 0.54 >More info 0.27 >More info 9 hr Non-Stress Total RNA seedlings Original data GEO bulk
53 ckh1 CK25 0.54 >More info 0.27 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
54 Col-Luc WT 3h antimycin A 0.56 >More info 0.23 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
55 Col0-PsmES4326-24hpi 0.18 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
56 Te 3d -0.54 >More info -0.24 >More info Te CA Leaves Original data
57 9 hr Hypoxia 1 hr recovery IP RNA 0.52 >More info 0.26 >More info 9 hr Non-Stress IP RNA seedlings Original data GEO bulk
58 GRX-overexpression seedlings MV -0.58 >More info -0.19 >More info WT seedlings MV Seedlings Original data GEO bulk
59 +1.6 mM Tween 20 1 h. 0.50 >More info 0.27 >More info +distilled water 1 h. Original data GEO bulk
60 3x(m) 0.52 >More info 0.24 >More info 2x two week old seedlings Original data
61 Col 3d -0.52 >More info -0.24 >More info Col CA Leaves Original data
62 elevated CO2 low Mg shoot 0.54 >More info 0.22 >More info atmospheric CO2 low Mg shoot Shoot Original data
63 Laer Flg22(Agrobacterium) 1h -0.54 >More info -0.22 >More info Laer Control leaf discs Original data GEO bulk
64 Col-0 RNAi-MBS2/mbs1-1 HL 0h 0.24 >More info 0.50 >More info Col-0 WT HL 0h without high light treatment whole seedlings without root Original data
65 IAA7mII over-expressor IAA Treated 0.04 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
66 Laer Flg22 1h 0.53 >More info 0.19 >More info Laer Control leaf discs Original data GEO bulk
67 siliques AtHb1 control 0.20 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
68 mkk1 control rep -0.55 >More info -0.15 >More info Col-0 Time 0 rep Original data GEO bulk
69 2hr continuous KNO3 SR cell 0.54 >More info 0.14 >More info 2hr KCl control PrR cell Stele root cells Original data GEO bulk
70 Col light-light EtOH -0.52 >More info -0.16 >More info Col light-light Mock 2.5% ethanol Original data GEO bulk
71 Heat shock optimum 0.03 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
72 afb3-1 2h KNO3 0.10 >More info 0.58 >More info Ws 2h KNO3 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
73 Col-0 DEX Shade -0.51 >More info -0.16 >More info Col-0 DEX WL seedlings Original data
74 Mutant ag-12(flower) 0.53 >More info 0.13 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
75 gapcp1gapcp2 ABA -0.16 >More info -0.50 >More info WT ABA ABA seedling Original data GEO bulk
76 PNO8 12 h -0.03 >More info -0.62 >More info Mock 12 h Original data Effect of other inhibitors on seedlings
77 pXVE:HA-EDM2-a untreated -0.10 >More info -0.55 >More info Col-0 untreated seedlings Original data GEO bulk
78 mkk2 control rep -0.51 >More info -0.13 >More info Col-0 Time 0 rep Original data GEO bulk
79 til1-1 22C 0.56 >More info 0.08 >More info Col-0 22C Original data GEO bulk
80 ein2-1 24hpi A. brassicicola -0.56 >More info -0.07 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
81 2hr transitory KNO3 SR cell 0.54 >More info 0.07 >More info 2hr KCl control PrR cell Stele root cells Original data GEO bulk
82 2hr KCl control SR cell 0.53 >More info 0.06 >More info 2hr KCl control PrR cell Stele root cells Original data GEO bulk
83 seed germinating in countinuous light 24h SL -0.08 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
84 NahG -0.58 >More info -0.01 >More info Col-0 Leaves Original data GEO bulk
85 CCA1-ox 6am non-polysomal 0.08 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
86 NJ15 0.06 >More info 0.50 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
87 Laer pretreat GA Flg22 1h -0.15 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
88 rosette leaves bdg -0.52 >More info -0.03 >More info rosette leaves WT Young rosette leaves 2mm to 1cm Original data GEO bulk
89 Shoot apex inflorescence (after bolting) -0.10 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
90 chl1-5 Nitrate 0.5h -0.05 >More info -0.50 >More info WT Nitrate 0.5h Original data GEO bulk
91 Sucrose 90 mM 6h in dark -0.50 >More info -0.03 >More info AIR EXPERIMENT Original data GEO bulk
92 WT 3h -P -0.01 >More info 0.53 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
93 pad2-PsmES4326-24hpi -0.53 >More info 0.02 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
94 atm3 -0.06 >More info 0.55 >More info Col0 whole plant Original data GEO bulk
95 Genotoxic Stress 3 h (shoot) 0.03 >More info -0.52 >More info Stress mock 3 h (shoot) Original data Stress treatments
96 2hr continuous KNO3 PeR cell 0.08 >More info -0.56 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
97 AtMinD1 Prolonged-induction 0.50 >More info -0.03 >More info Control whole plant Original data GEO bulk
98 Laer pretreat JA Flg22 1h 0.54 >More info -0.09 >More info Laer pretreat water control leaf discs Original data GEO bulk
99 root longitudinal zone-1 -Fe 0.11 >More info -0.55 >More info root longitudinal zone-1 standard Original data GEO bulk
100 aln-1 -0.50 >More info 0.06 >More info Col-0 Aerial part of seedlings Original data
101 Leafminer damaged seedlings -0.18 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
102 TaFLS overexpression line (OE1) -0.54 >More info 0.17 >More info Col-0 Rosette leaves Original data
103 Laer Flg22(Agrobacterium) 2h -0.60 >More info 0.31 >More info Laer Control leaf discs Original data GEO bulk
104 Mh0 UV -0.41 >More info 0.52 >More info Mh0 mock UV seedling Original data
105 WT 30μM phosphate 8 hours. -0.44 >More info 0.52 >More info WT control (not supplemented). Original data