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List of experiments correlated with "atm3"

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Score	Experiment	Correlation from atm3	Correlation to atm3	Control Experiment	Genotype	Treatment	Tissue	Link to original data	Experimental Category	Data set Details
1	atm3	1.00 >More info	1.00 >More info	Col0			whole plant	Original data	GEO bulk
2	Genotoxic Stress 3 h (shoot)	-0.83 >More info	-0.85 >More info	Stress mock 3 h (shoot)				Original data	Stress treatments
3	seedling 3h after Gamma WT	-0.83 >More info	-0.77 >More info	seedling day 1 unirradiated WT		3h		Original data
4	seedling 1.5h after Gamma WT	-0.83 >More info	-0.69 >More info	seedling day 1 unirradiated WT		1.5h		Original data
5	irradiated leaf (WT 1d)	-0.76 >More info	-0.69 >More info	control leaf (WT 1d)			rosette leaf only	Original data	GEO bulk
6	Genotoxic Stress 3 h (root)	-0.81 >More info	-0.63 >More info	Stress mock 3 h (root)				Original data	Stress treatments
7	seedling 24h after HZE atm-1	-0.76 >More info	-0.66 >More info	seedling day 2 unirradiated atm-1		24h		Original data
8	seedling 24h after HZE WT	-0.72 >More info	-0.68 >More info	seedling day 2 unirradiated WT		24h		Original data
9	seedling 1.5h after HZE WT	-0.85 >More info	-0.52 >More info	seedling day 1 unirradiated WT		1.5h		Original data
10	seedling 6h after Gamma WT	-0.80 >More info	-0.47 >More info	seedling day 1 unirradiated WT		6h		Original data
11	seedling 6h after HZE WT	-0.85 >More info	-0.39 >More info	seedling day 1 unirradiated WT		6h		Original data
12	irradiated leaf (cmt 1d)	-0.72 >More info	-0.49 >More info	control leaf (cmt 1d)			rosette leaf only	Original data	GEO bulk
13	pil5 red light	-0.76 >More info	-0.44 >More info	Col-0 red light				Original data	GEO bulk
14	seedling 12h after HZE WT	-0.80 >More info	-0.38 >More info	seedling day 1 unirradiated WT		12h		Original data
15	irradiated leaf (cmt 5d)	-0.68 >More info	-0.47 >More info	control leaf (cmt 5d)			rosette leaf only	Original data	GEO bulk
16	gis5 seedlings	-0.77 >More info	-0.28 >More info	WT seedlings			Whole seedlings (leaves + roots)	Original data
17	esd7-1	-0.62 >More info	-0.43 >More info	Ler			seedlings	Original data	GEO bulk
18	seedling 1.5h after Gamma atm-1	-0.77 >More info	-0.24 >More info	seedling day 1 unirradiated atm-1		1.5h		Original data
19	IAA7mII over-expressor IAA Treated	0.32 >More info	0.69 >More info	empty vector IAA Treated				Original data	GEO bulk
20	flu dark 8hours/30 minute light	-0.50 >More info	-0.50 >More info	col dark 8hours/30 minute light				Original data	GEO bulk
21	csn3-1 light	-0.68 >More info	-0.30 >More info	WT light				Original data	GEO bulk
22	csn5 (csn5a-2 csn5b) light	-0.67 >More info	-0.31 >More info	WT light				Original data	GEO bulk
23	afb3-1 2h KNO3	0.58 >More info	0.39 >More info	Ws 2h KNO3		2 hours of 5 mM KNO3	Arabidopsis root	Original data	GEO bulk
24	miR393 0h	0.43 >More info	0.54 >More info	WT 0h			Leaf tissue	Original data	GEO bulk
25	WT seedlings MV	-0.64 >More info	-0.31 >More info	WT seedlings control			Seedlings	Original data	GEO bulk
26	nas4x leaves - Fe	0.71 >More info	0.24 >More info	WT leaves - Fe			Leaves	Original data	GEO bulk
27	bri1-116	0.21 >More info	0.73 >More info	Col			seedling	Original data	GEO bulk
28	protoplasts T2 [flg22]	0.61 >More info	0.30 >More info	protoplasts T2 [CPK]			mesophyll protoplasts	Original data	GEO bulk
29	OE WRKY63.3 high light	-0.55 >More info	-0.35 >More info	OE WRKY40.4 high light		high light for 1h at 1000 μE m-2s-1	leaf	Original data	GEO bulk
30	Kas -Fe 24h Shoots	-0.66 >More info	-0.23 >More info	Kas +Fe 24h Shoots				Original data	GEO bulk
31	ADD3	0.54 >More info	0.34 >More info	WT			aerial part	Original data	GEO bulk
32	control leaf (cmt 5d)	0.69 >More info	0.19 >More info	control leaf (WT 5d)			rosette leaf only	Original data	GEO bulk
33	UV	-0.54 >More info	-0.33 >More info	WT			aerial region	Original data	GEO bulk
34	Col-0 norflurazon	-0.71 >More info	-0.16 >More info	Col-0 control				Original data	GEO bulk
35	Col-0 low oxygen	-0.67 >More info	-0.19 >More info	Col-0				Original data	GEO bulk
36	BLM	-0.65 >More info	-0.20 >More info	CK		BLM	seedling	Original data
37	Kas -Fe 48h Shoots	-0.55 >More info	-0.29 >More info	Kas +Fe 24h Shoots				Original data	GEO bulk
38	piffq 2d WL	-0.55 >More info	-0.28 >More info	WT 2d WL			whole seedling	Original data	GEO bulk
39	sicy-192 cotyledons	-0.71 >More info	-0.11 >More info	WT cotyledons			cotyledons	Original data
40	apum23	-0.70 >More info	-0.12 >More info	WT (Col-3)			aerial parts	Original data	GEO bulk
41	seedling 3h after HZE WT	-0.83 >More info	0.02 >More info	seedling day 1 unirradiated WT		3h		Original data
42	1 h Light Total RNA	0.23 >More info	0.57 >More info	1h Dark Total RNA		1 h light control	whole seedlings	Original data	GEO bulk
43	24h light (+Lincomycin)	-0.54 >More info	-0.25 >More info	24h light (-Lincomycin)			seedlings	Original data	GEO bulk
44	R. solani AG2-1	0.60 >More info	0.18 >More info	control		Rhizoctonia solani AG2-1	whole seedling	Original data	GEO bulk
45	BLM+INA	-0.64 >More info	-0.14 >More info	CK		BLM and INA	seedling	Original data
46	UV Stress 24 h (shoot)	-0.58 >More info	-0.19 >More info	Stress mock 24 h (shoot)				Original data	Stress treatments
47	WT leaves - Fe	-0.71 >More info	-0.06 >More info	WT leaves + Fe			Leaves	Original data	GEO bulk
48	Col leaf 100mM NaCl	-0.54 >More info	-0.22 >More info	Col leaf 0mM NaCl			leaf	Original data	GEO bulk
49	Col leaf 100mM NaCl	-0.54 >More info	-0.22 >More info	Col leaf 0mM NaCl			leaf	Original data	GEO bulk
50	fri-flc	-0.56 >More info	-0.20 >More info	WT				Original data	GEO bulk
51	Col 100mM NaCl	-0.54 >More info	-0.22 >More info	Col 0mM NaCl		100mM NaCl	leaf	Original data	GEO bulk
52	Inflorescences Trp1	-0.69 >More info	-0.07 >More info	Inflorescences ler			inflorescences	Original data	GEO bulk
53	pil5 dark	-0.73 >More info	-0.02 >More info	Col-0 dark				Original data	GEO bulk
54	WT NAA 2h	0.25 >More info	0.50 >More info	WT 0h			Leaf tissue	Original data	GEO bulk
55	MYB29 OE	-0.57 >More info	-0.17 >More info	WT for MYB29/76				Original data	GEO bulk
56	csn3-1 dark	-0.67 >More info	-0.04 >More info	WT dark				Original data	GEO bulk
57	csn4-1 mutant	-0.68 >More info	-0.02 >More info	WT dark				Original data	GEO bulk
58	seedling 12h after Gamma WT	-0.72 >More info	0.02 >More info	seedling day 1 unirradiated WT		12h		Original data
59	E2Fa-Dpa	-0.75 >More info	0.05 >More info	WT				Original data	GEO bulk
60	TaFLS overexpression line (OE1)	-0.51 >More info	-0.19 >More info	Col-0			Rosette leaves	Original data
61	csn5 (csn5a-2 csn5b) dark	-0.69 >More info	0.00 >More info	WT dark				Original data	GEO bulk
62	seedling 12h after HZE atm-1	-0.71 >More info	0.02 >More info	seedling day 1 unirradiated atm-1		12h		Original data
63	seedling 6h after Gamma atm-1	-0.61 >More info	-0.07 >More info	seedling day 1 unirradiated atm-1		6h		Original data
64	seedling 12h after Gamma atm-1	-0.69 >More info	0.01 >More info	seedling day 1 unirradiated atm-1		12h		Original data
65	miR mutant (higher order mutant)	-0.72 >More info	0.04 >More info	col control (higher order mutant)				Original data	GEO bulk
66	WT mitomycin C	-0.63 >More info	-0.04 >More info	WT mock			shoot apical meristem	Original data
67	ceh1 mutant	-0.51 >More info	-0.16 >More info	Parent line				Original data
68	seedling 6h after HZE atm-1	-0.61 >More info	-0.05 >More info	seedling day 1 unirradiated atm-1		6h		Original data
69	RPL18 TuMV inoculated total RNA	-0.55 >More info	-0.11 >More info	mock inoculated total RNA			PO	Original data	GEO bulk
70	Leafminer damaged seedlings	0.09 >More info	0.56 >More info	Healthy seedlings			leaves	Original data	GEO bulk
71	rdr1-1	0.51 >More info	0.12 >More info	Col-0				Original data	GEO bulk
72	seedling 24h after Gamma WT	-0.64 >More info	0.01 >More info	seedling day 2 unirradiated WT		24h		Original data
73	phyABCDE Dark	-0.56 >More info	-0.06 >More info	WT Dark		Dark	whole seedling	Original data	GEO bulk
74	epidermis control	-0.53 >More info	-0.09 >More info	Control for tissue data		mock	epidermis	Original data	GEO bulk
75	CCA1-ox 6am non-polysomal	0.11 >More info	0.51 >More info	WT 6am non-polysomal			aerial part	Original data
76	Time-0 chr11-1chr17-1	-0.55 >More info	-0.06 >More info	Time-0 Col-0			leaf explants	Original data
77	root cells epidermis and lateral root cap -Fe	-0.58 >More info	-0.03 >More info	whole roots standard				Original data	GEO bulk
78	46T-Dry	-0.55 >More info	-0.05 >More info	WT-Dry		dehydration treatment 1h		Original data
79	Mutant clv3-7(shoot apex)	-0.55 >More info	-0.05 >More info	Shoot apex inflorescence (after bolting)				Original data	Developmental series; organs / tissues at different ages
80	pnp1-1 3h +P	-0.50 >More info	-0.10 >More info	WT 3h +P		Full nutrient medium (+P)	seedlings without roots	Original data	GEO bulk
81	dcl2-1	0.61 >More info	-0.01 >More info	Col-0				Original data	GEO bulk
82	JA 24h	0.58 >More info	0.02 >More info	EtOH 24h		24hr		Original data	GEO bulk
83	Laer pretreat GA Flg22 1h	-0.11 >More info	0.71 >More info	Laer pretreat water control			leaf discs	Original data	GEO bulk
84	Elevated CO2 AMPLE N NIGHT	-0.10 >More info	-0.50 >More info	Ambient CO2 AMPLE N NIGHT			Youngest Most Fully Expanded Leaf	Original data
85	essp4/sdg8-5 mutant	-0.55 >More info	-0.04 >More info	wild type			leaf	Original data	GEO bulk
86	WT zebularine 5d	-0.59 >More info	0.01 >More info	WT mock 5d			shoot apical meristem	Original data
87	Col-0 +lincomycin	-0.51 >More info	-0.06 >More info	Col-0 -lincomycin				Original data	GEO bulk
88	rdr2-1	0.54 >More info	0.03 >More info	Col-0				Original data	GEO bulk
89	sdg8-2 mutant	-0.56 >More info	-0.01 >More info	wild type			leaf	Original data	GEO bulk
90	Imbibed 24 h ABA 30uM (seed)	-0.60 >More info	0.03 >More info	Imbibed 24 h (seed)				Original data	Effect of ABA during seed imbibition
91	ARF10	0.61 >More info	-0.05 >More info	Col-0				Original data	GEO bulk
92	HDG4	-0.57 >More info	0.01 >More info	Control for tissue data			shoot apical meristem	Original data	GEO bulk
93	per1 in control medium	-0.52 >More info	-0.03 >More info	Col in control medium			root	Original data	GEO bulk
94	miR396b overexpressor	0.54 >More info	0.01 >More info	Col-0			vegetative apices together with the leaf primordia	Original data
95	Bur-0-3h IAA	-0.50 >More info	-0.04 >More info	Bur-0h IAA			whole plant	Original data	GEO bulk
96	Norflurazon	-0.57 >More info	0.03 >More info	Col-0				Original data	GEO bulk
97	Norflurazon	-0.57 >More info	0.03 >More info	WT-Contrl		a herbicide (Norflurazon)	seedling	Original data	GEO bulk
98	whole roots -Fe 72 hour	-0.59 >More info	0.06 >More info	whole roots standard				Original data	GEO bulk
99	Fe starvation 72 h	-0.59 >More info	0.06 >More info	Control				Original data	GEO bulk
100	seedling 24h after Gamma atm-1	-0.57 >More info	0.04 >More info	seedling day 2 unirradiated atm-1		24h		Original data
101	Imbibed 3 h (seed)	-0.52 >More info	0.00 >More info	Dry seed				Original data	Time course of early seed germination
102	LTN008-2 aza-dc	-0.51 >More info	-0.01 >More info	LTN012-2 Mock				Original data
103	sfr6 drought	-0.03 >More info	0.55 >More info	WT drought			All aerial tissue	Original data	GEO bulk
104	GiantCell Root	-0.66 >More info	0.15 >More info	Control Root			laser captured giant cells	Original data	GEO bulk
105	LAS	-0.51 >More info	-0.00 >More info	Control for tissue data			shoot apical meristem	Original data	GEO bulk
106	dcl3-1	0.51 >More info	0.00 >More info	Col-0				Original data	GEO bulk
107	rpl24 polysome	-0.56 >More info	0.05 >More info	WT polysome			seedling shoot/aerial seedling	Original data
108	noa1-2	-0.57 >More info	0.06 >More info	Col-0			whole seedlings	Original data	GEO bulk
109	HMG	-0.51 >More info	0.00 >More info	Control for tissue data			shoot apical meristem	Original data	GEO bulk
110	SHR-GR Time 1H Dex	0.53 >More info	-0.03 >More info	SHR-GR Time 0H Dex		Dex media for 1 hour		Original data	GEO bulk
111	IAA19mII over-expressor mock	0.51 >More info	-0.01 >More info	empty vector mock				Original data	GEO bulk
112	embryo proper heart stage	-0.52 >More info	0.02 >More info	Control for tissue data			embryo proper captured by LCM	Original data	GEO bulk
113	protoplasts T1 [flg22]	0.55 >More info	-0.06 >More info	protoplasts T1 [CPK]			mesophyll protoplasts	Original data	GEO bulk
114	Col0-PsmES4326-24hpi	-0.13 >More info	0.61 >More info	Col0-mock-24hpi			leaf	Original data	GEO bulk
115	seedlings +5AC	-0.63 >More info	0.16 >More info	control seedlings			10-day old whole seedling	Original data	GEO bulk
116	Mutant lfy-12(flower)	-0.50 >More info	0.07 >More info	Flowers stage12				Original data	Developmental series; organs / tissues at different ages
117	erf115ko roottip5days	-0.54 >More info	0.12 >More info	Col-0 roottip5days			root tips	Original data
118	phyB mutant 16C 4hrs	-0.54 >More info	0.12 >More info	16C 4hs			whole plant excluding roots	Original data	GEO bulk
119	ABA+DMTU	0.52 >More info	-0.10 >More info	control				Original data	GEO bulk
120	WT (Col) glucose	-0.15 >More info	0.55 >More info	WT (Col)		glucose	seedlings	Original data	GEO bulk
121	seed germinating in countinuous light 24h SL	-0.29 >More info	0.67 >More info	Control for tissue data			seed	Original data	GEO bulk
122	root stele -S	-0.50 >More info	0.12 >More info	root stele pH5.7				Original data	GEO bulk
123	Col BTH	-0.30 >More info	0.67 >More info	Col			rosettes	Original data	GEO bulk
124	phosphate-starved	0.52 >More info	-0.16 >More info	control			shoot tissue	Original data	GEO bulk
125	ABA SA 24h	0.54 >More info	-0.19 >More info	EtOH 24h		24hr		Original data	GEO bulk
126	mutant-line1135	-0.53 >More info	0.21 >More info	WT-control			whole plant	Original data	GEO bulk
127	ddm1-12	-0.53 >More info	0.21 >More info	wt			whole seedling	Original data	GEO bulk
128	ABA JA 24h	0.51 >More info	-0.22 >More info	EtOH 24h		24hr		Original data	GEO bulk
129	irradiated leaf (WT 5d)	-0.60 >More info	0.31 >More info	control leaf (WT 5d)			rosette leaf only	Original data	GEO bulk
130	Shoot apex inflorescence (after bolting)	-0.38 >More info	0.65 >More info	Control for tissue data				Original data	Developmental series; organs / tissues at different ages
131	Heat shock optimum	-0.46 >More info	0.65 >More info	Heat shock baseline		Photosynthesis at optimum temperature	leaf first fully expanded	Original data	GEO bulk
132	siliques AtHb1 control	-0.40 >More info	0.52 >More info	siliques WT control		control	silique	Original data	GEO bulk