4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Col light-dark EtOH
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List of experiments correlated with "Col light-dark EtOH"  Help Download transcriptome of top 30
Score Experiment Correlation from
Col light-dark EtOH		 Correlation to
Col light-dark EtOH		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Col light-dark EtOH 1.00 >More info 1.00 >More info Col light-dark Mock 2.5% ethanol Original data GEO bulk
2 Col light-light EtOH 0.86 >More info 0.83 >More info Col light-light Mock 2.5% ethanol Original data GEO bulk
3 HS 0.59 >More info 0.55 >More info noneHS Original data GEO bulk
4 Heat and anoxia 0.47 >More info 0.63 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
5 Anoxia 0.35 >More info 0.72 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
6 seedling -S Exp 0.26 >More info 0.76 >More info seedling FN Exp seedling Original data
7 Seedling-HeatStressed TOTALmRNA 0.36 >More info 0.65 >More info Seedling-control TOTALmRNA seedling Original data
8 Seedling-HeatStressed POLYSOMESmRNA 0.37 >More info 0.64 >More info Seedling-control POLYSOMESmRNA seedling Original data
9 WT seedlings MV 0.41 >More info 0.59 >More info WT seedlings control Seedlings Original data GEO bulk
10 WT heat shock 0.43 >More info 0.56 >More info WT untreated above-ground parts Original data GEO bulk
11 Laer MeJA 1h 0.52 >More info 0.46 >More info Laer Control leaf discs Original data GEO bulk
12 Red/FR Light45min 0.24 >More info 0.74 >More info FarRed Light 45min Original data Light treatments
13 PsJN -0.43 >More info -0.55 >More info Control inoculated with the PGPR bacterial model Burkholderia phytofirmans PsJN Plantlet Original data GEO bulk
14 Dark 3day ivd 0.45 >More info 0.52 >More info 0h ivd Original data
15 Heat shock 30%Inhibition 0.39 >More info 0.58 >More info Heat shock baseline Photosynthesis at 30% inhibition from optimum leaf first fully expanded Original data GEO bulk
16 Col-0 low oxygen 0.39 >More info 0.57 >More info Col-0 Original data GEO bulk
17 Heat shock 20%Inhibition 0.36 >More info 0.59 >More info Heat shock baseline Photosynthesis at 20% inhibition from optimum leaf first fully expanded Original data GEO bulk
18 NJ15 0.36 >More info 0.59 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
19 Heat 0.41 >More info 0.51 >More info Control 90 minutes at 38°C. Original data GEO bulk
20 Constans-mutant -0.31 >More info -0.61 >More info Col control above-ground whole plant Original data GEO bulk
21 Col-0 Flg22 4h -0.51 >More info -0.40 >More info Col-0 H2O 4h Original data GEO bulk
22 Mutant lwd1_lwd2 0.36 >More info 0.54 >More info Wildtype for phy mutants Original data GEO bulk
23 LWD1 and LWD2 in photoperiod regulation (lwd1lwd2
)		 0.36 >More info 0.54 >More info LWD1 and LWD2 in photoperiod regulation (wt ) Original data GEO bulk
24 1 h Light Total RNA -0.21 >More info -0.69 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
25 WT +elf18 2h -0.55 >More info -0.34 >More info WT untreated elf18 Original data GEO bulk
26 Ws HS 0.28 >More info 0.61 >More info Ws control heat shocked seedling Original data GEO bulk
27 DC3000 7h 0.39 >More info 0.50 >More info Mock 7h DC3000 Original data GEO bulk
28 OsSAP11 expressing -0.34 >More info -0.54 >More info WT seedlings Original data GEO bulk
29 WT 3H Cold 0.25 >More info 0.63 >More info WT control Original data GEO bulk
30 Leaf wounded 0.33 >More info 0.54 >More info Leaf control vegetative leaf Original data GEO bulk
31 OsRLCK253 expressing -0.30 >More info -0.57 >More info WT seedlings Original data GEO bulk
32 Col-0 37C 0.33 >More info 0.53 >More info Col-0 22C Original data GEO bulk
33 G3P -0.30 >More info -0.56 >More info Mock distal leaves Original data GEO bulk
34 Col-0 HS 0.18 >More info 0.66 >More info Col-0 control heat shocked seedling Original data GEO bulk
35 WT (Col-0) heat shock 0.18 >More info 0.66 >More info WT (Col-0) whole seedling Original data GEO bulk
36 shl-2 Pool 0.27 >More info 0.56 >More info Ler Pool seedling Original data GEO bulk
37 Protoplast Induced 0.26 >More info 0.57 >More info Uninduced Original data GEO bulk
38 Laer pretreat GA Flg22 1h 0.11 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
39 Col-Luc WT 3h antimycin A 0.31 >More info 0.50 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
40 2hr continuous KNO3 ECR cell 0.30 >More info 0.50 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
41 seedling h S Exp -0.10 >More info -0.70 >More info seedling -S Exp seedling Original data
42 +1.6 mM Tween 20 1 h. -0.19 >More info -0.60 >More info +distilled water 1 h. Original data GEO bulk
43 FLIGHT TAGESB plate6 ROOTS 0.28 >More info 0.51 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
44 whole roots 140 mM NaCl 30 minutes 0.21 >More info 0.58 >More info whole roots standard Original data GEO bulk
45 Mutant sav3-2 (WL) -0.23 >More info -0.55 >More info Col-0 (WL) Original data GEO bulk
46 sav3-2 light -0.23 >More info -0.55 >More info Col-0 light seedlings Original data GEO bulk
47 rosette Dark Wounded 0.21 >More info 0.56 >More info rosette Dark Control Original data GEO bulk
48 Shoot dark control 24h 0.23 >More info 0.54 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
49 35S::MBF1c 0.27 >More info 0.50 >More info control Original data GEO bulk
50 ABA control 0.20 >More info 0.57 >More info No ABA control Original data GEO bulk
51 dark-hs 0.23 >More info 0.54 >More info dark-control seedling Original data
52 IAA7mII over-expressor IAA Treated 0.07 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
53 Selenate (root) 0.24 >More info 0.51 >More info Ws (root) Original data GEO bulk
54 Root Selenate 0.24 >More info 0.51 >More info Root control 40 micromolar selenate Root Original data GEO bulk
55 Whole root - low pH 3H 0.22 >More info 0.52 >More info Whole root - Std pH 3H pH 4.6 for 3 hr Original data GEO bulk
56 FLIGHT TAGESB plate 0.22 >More info 0.52 >More info GROUND CONTROL TAGESB plate Original data
57 Imbibed 1 h (seed) 0.09 >More info 0.64 >More info Dry seed Original data Time course of early seed germination
58 Heat shock optimum 0.08 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
59 M6PR transgenic leaf 0mM NaCl 0.20 >More info 0.52 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
60 WT 6H Cold 0.22 >More info 0.50 >More info WT control Original data GEO bulk
61 1 h Light IP RNA -0.12 >More info -0.60 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
62 Col0-PsmES4326-24hpi 0.10 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
63 FarRed Light 45min -0.04 >More info -0.66 >More info White Light 45min Original data Light treatments
64 1h +Pi -0.19 >More info -0.51 >More info 1h -Pi root Original data GEO bulk
65 WT roots - Fe 0.01 >More info 0.68 >More info WT roots + Fe Roots Original data GEO bulk
66 sfr6 drought -0.13 >More info -0.56 >More info WT drought All aerial tissue Original data GEO bulk
67 tmm1-inflorescence-tips -0.13 >More info -0.55 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
68 pip3 At2g19270 TDNA 9 0.15 >More info 0.53 >More info Col-0 whole plant Original data GEO bulk
69 erf115ko roottip5days -0.14 >More info -0.53 >More info Col-0 roottip5days root tips Original data
70 ex1 flu dark 8hours/30 minute light 0.15 >More info 0.50 >More info col dark 8hours/30 minute light Original data GEO bulk
71 Root wt CLE10 -0.04 >More info -0.61 >More info Root wt CLE25 root tip Original data GEO bulk
72 Kas-1 -Fe 24h -0.11 >More info -0.54 >More info Kas-1 +Fe 24h roots Original data GEO bulk
73 Kas -Fe 24h Roots -0.11 >More info -0.54 >More info Kas +Fe 24h Roots Original data GEO bulk
74 TNT-seedlings 0.08 >More info 0.57 >More info DMF-control-seedlings TNT-treated-seedlings whole plant Original data GEO bulk
75 30m light -0.14 >More info -0.50 >More info before light whole seedlings Original data GEO bulk
76 6h volatiles Sm. R3089 0.09 >More info 0.53 >More info 6h untreated whole seedling Original data GEO bulk
77 pab polysome 0.07 >More info 0.54 >More info WT polysome seedling shoot/aerial seedling Original data
78 GST-overexpression seedlings control 0.10 >More info 0.51 >More info WT seedlings control Seedlings Original data
79 pif4pif5 mut dark -0.04 >More info -0.55 >More info WT dark Original data GEO bulk
80 seed germinating in countinuous light 24h SL -0.08 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
81 Dark 4 h pls RedLight 1min -0.06 >More info -0.52 >More info Dark 4 h Original data Light treatments
82 Dark 4 h pls UV-A 5 min -0.06 >More info -0.52 >More info Dark 4 h Original data Light treatments
83 -Sulfate 24 h -0.03 >More info 0.61 >More info Mock 24 h (1500uM sulfate) Original data Response to sulfate limitation
84 rgs1+mannitol 0.08 >More info 0.50 >More info WT+mannitol rosette leaves Original data GEO bulk
85 Col BTH -0.10 >More info 0.67 >More info Col rosettes Original data GEO bulk
86 Seedling KUA1-IOX est 0.03 >More info 0.54 >More info Seedling KUA1-IOX mock Original data
87 bri1-116 -0.16 >More info 0.73 >More info Col seedling Original data GEO bulk
88 Shoot apex inflorescence (after bolting) -0.11 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
89 4C 2h(SOIL) 0.01 >More info 0.50 >More info 4C 0h(SOIL) Original data GEO bulk
90 CCA1-ox 6am non-polysomal -0.00 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
91 siliques AtHb1 control -0.07 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
92 3x(m) -0.20 >More info 0.60 >More info 2x two week old seedlings Original data
93 Leafminer damaged seedlings -0.17 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
94 GO5; 0h switch to ambient CO2 concentrations; 0.41 >More info -0.58 >More info WT; 0h switch to ambient CO2 concentrations; 2 whole rosettes Original data
95 WT +Pep2 2h -0.51 >More info 0.35 >More info WT untreated Pep2 Original data GEO bulk