4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on pap1-D
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List of experiments correlated with "pap1-D"  Help Download transcriptome of top 30
Score Experiment Correlation from
pap1-D		 Correlation to
pap1-D		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 pap1-D 1.00 >More info 1.00 >More info Col-0 aerial part Original data
2 WOX1-1 0.93 >More info 0.91 >More info Col-0 aerial part Original data
3 MYB12OX 0.85 >More info 0.87 >More info Col-0 aerial part Original data
4 pap1-D/tt4 0.86 >More info 0.85 >More info Col-0 aerial part Original data
5 MYB12OX/tt4 0.79 >More info 0.85 >More info Col-0 aerial part Original data
6 tt4 0.75 >More info 0.82 >More info Col-0 aerial part Original data
7 1 h Light Total RNA -0.71 >More info -0.76 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
8 12h volatiles Sm. R3089 0.62 >More info 0.78 >More info 12h untreated whole seedling Original data GEO bulk
9 shl-2 Pool 0.61 >More info 0.79 >More info Ler Pool seedling Original data GEO bulk
10 M6PR transgenic 0mM NaCl 0.71 >More info 0.68 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
11 Pseudomonas 0.60 >More info 0.79 >More info Control pseudomonas treated whole seedling Original data GEO bulk
12 leaf blade in D 0.64 >More info 0.75 >More info leaf blade in WL leaf blades Original data GEO bulk
13 mil4 0.71 >More info 0.67 >More info Col rosettes Original data GEO bulk
14 6h volatiles Sm. R3089 0.59 >More info 0.77 >More info 6h untreated whole seedling Original data GEO bulk
15 1 h Light IP RNA -0.61 >More info -0.73 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
16 M6PR transgenic leaf 0mM NaCl 0.61 >More info 0.72 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
17 Atss3 Light4 -0.62 >More info -0.69 >More info Atss3 Dark0.5 Original data GEO bulk
18 Col(gl) 0mM NaCl 0.62 >More info 0.69 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
19 Col(gl) leaf 0mM NaCl 0.62 >More info 0.69 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
20 petiole in D 0.57 >More info 0.72 >More info petiole in WL petioles Original data GEO bulk
21 petiole in FRD 0.61 >More info 0.66 >More info petiole in WL petioles Original data GEO bulk
22 leaf blade in FRD 0.59 >More info 0.66 >More info leaf blade in WL leaf blades Original data GEO bulk
23 rosette Light Wounded 0.56 >More info 0.68 >More info rosette Light Control Original data GEO bulk
24 Col-0 shade 0.51 >More info 0.69 >More info Col-0 light seedlings Original data GEO bulk
25 Night Time Treatment -0.54 >More info -0.64 >More info Night Time Control 1hr white light pulse aerial rosette Original data
26 Shoot dark control 7h 0.53 >More info 0.65 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
27 sid2 0.61 >More info 0.56 >More info Col rosettes Original data GEO bulk
28 npr1-3 MOCK 48h -0.59 >More info -0.58 >More info Col-0 MOCK 48h Original data GEO bulk
29 Atss3 Light1 -0.58 >More info -0.59 >More info Atss3 Dark0.5 Original data GEO bulk
30 Col leaf 100mM NaCl 0.57 >More info 0.60 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
31 Col leaf 100mM NaCl 0.57 >More info 0.60 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
32 Col 100mM NaCl 0.57 >More info 0.60 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
33 WT hypoxia 0.55 >More info 0.62 >More info WT normoxia whole rosette Original data
34 Col BTH 0.49 >More info 0.67 >More info Col rosettes Original data GEO bulk
35 Te 8h 0.51 >More info 0.64 >More info Te CA Leaves Original data
36 mkk2 control rep 0.56 >More info 0.59 >More info Col-0 Time 0 rep Original data GEO bulk
37 sfr2 control -0.65 >More info -0.50 >More info WT control All aerial tissue Original data GEO bulk
38 Day Time Treatment -0.53 >More info -0.61 >More info Day Time Control 1hr white light pulse aerial rosette Original data
39 Heat shock optimum 0.48 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
40 mil4 sid2 0.59 >More info 0.53 >More info Col rosettes Original data GEO bulk
41 OE WRKY63.3 high light 0.48 >More info 0.64 >More info OE WRKY40.4 high light high light for 1h at 1000 μE m-2s-1 leaf Original data GEO bulk
42 cpr5npr1 0.48 >More info 0.64 >More info WT(COL) Original data GEO bulk
43 camta1-2 0.45 >More info 0.66 >More info Col-0-WT Original data GEO bulk
44 SOS1 0mM NaCl 0.64 >More info 0.47 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
45 24h volatiles Sm. R3089 0.50 >More info 0.61 >More info 24h untreated whole seedling Original data GEO bulk
46 seedlings protease IV 0.56 >More info 0.54 >More info seedlings nontreated control whole seedling Original data
47 npr1 sni1 SA 0.52 >More info 0.58 >More info npr1 sni1 water salicylic acid seedling Original data GEO bulk
48 Rsch 8h 0.48 >More info 0.62 >More info Rsch CA Leaves Original data
49 Col-0 DEX Shade 0.58 >More info 0.51 >More info Col-0 DEX WL seedlings Original data
50 Mutant lwd1_lwd2 0.47 >More info 0.62 >More info Wildtype for phy mutants Original data GEO bulk
51 LWD1 and LWD2 in photoperiod regulation (lwd1lwd2
)		 0.47 >More info 0.62 >More info LWD1 and LWD2 in photoperiod regulation (wt ) Original data GEO bulk
52 CBF3 0mM NaCl 0.58 >More info 0.50 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
53 Shoot submergence 24h 0.49 >More info 0.59 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
54 Shoot dark control 24h 0.45 >More info 0.63 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
55 fls1-3 0.54 >More info 0.53 >More info Col-0 Rosette leaves Original data
56 Myzus persicae saliva 0.57 >More info 0.50 >More info Control Original data GEO bulk
57 aphid saliva treated 0.57 >More info 0.50 >More info control aphid saliva treated leaves Original data GEO bulk
58 Col-0 low oxygen 0.64 >More info 0.41 >More info Col-0 Original data GEO bulk
59 Dark 6h ivd 0.52 >More info 0.52 >More info 0h ivd Original data
60 60m light -0.45 >More info -0.59 >More info before light whole seedlings Original data GEO bulk
61 4C 2h(SOIL) 0.48 >More info 0.56 >More info 4C 0h(SOIL) Original data GEO bulk
62 MIL4 ox 0.55 >More info 0.48 >More info Col Original data GEO bulk
63 30m light -0.47 >More info -0.56 >More info before light whole seedlings Original data GEO bulk
64 low CO2 + dark 0.40 >More info 0.63 >More info normal CO2 + light Original data GEO bulk
65 Col-Luc WT 3h antimycin A 0.57 >More info 0.45 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
66 mutant acs9B (single mutant) 0.56 >More info 0.45 >More info col control (single mutant) Original data GEO bulk
67 ein5-1 ski2-3 0.50 >More info 0.51 >More info Col-0 aerial tissue Original data
68 shoot-10 μM DEX- 6 hr 0.59 >More info 0.41 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
69 sfr6 control -0.56 >More info -0.44 >More info WT control All aerial tissue Original data GEO bulk
70 Laer pretreat GA Flg22 1h 0.29 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
71 Col-0 Mock Shade 0.67 >More info 0.32 >More info Col-0 Mock WL seedlings Original data
72 Col-0 (t-zeatin 3 h) -0.54 >More info -0.45 >More info Col-0 Original data Cytokinin treatment of seedlings
73 seedlings-week-old RECA1-overexpressing
transgenic		 0.49 >More info 0.50 >More info seedlings-week-old Col-0 seedlings Original data
74 ebs Pool 0.52 >More info 0.46 >More info Ler Pool seedling Original data GEO bulk
75 Ws 100mM NaCl 0.57 >More info 0.41 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
76 Ws leaf 100mM NaCl 0.57 >More info 0.41 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
77 Col-0 C2H4 24h 0.50 >More info 0.48 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
78 low R/FR JA spray 0.44 >More info 0.54 >More info high R/FR JA spray low R/FR JA spray Original data GEO bulk
79 Col0-PsmES4326-24hpi 0.36 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
80 des1 Na2S 0.32 >More info 0.65 >More info WT Na2S Na2S leaf Original data GEO bulk
81 detached inflorescences 24h 0.39 >More info 0.58 >More info detached inflorescences 0h detached dark-held immature inflorescences inflorescences from the primary bolts Original data GEO bulk
82 mkk2 24h BTH rep 0.45 >More info 0.51 >More info Col-0 24h BTH rep Original data GEO bulk
83 sfr3 control -0.42 >More info -0.53 >More info WT control All aerial tissue Original data GEO bulk
84 bio4-1 mutant leaves 0.40 >More info 0.54 >More info WT leaves leaves Original data GEO bulk
85 +1.6 mM Tween 20 1 h. 0.39 >More info 0.55 >More info +distilled water 1 h. Original data GEO bulk
86 TaFLS overexpression line (OE2) 0.50 >More info 0.44 >More info Col-0 Rosette leaves Original data
87 Leafminer damaged seedlings 0.37 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
88 35S::MBF1c 0.36 >More info 0.57 >More info control Original data GEO bulk
89 mbd6 mutant thaliana 10-day-old seedling 0.56 >More info 0.36 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
90 CMV-A2b mutant 0.57 >More info 0.35 >More info Mock-At Aerial tissues Original data GEO bulk
91 AtHDA6(rts1-1) rts1-5 0.51 >More info 0.41 >More info null-mutant whole plant Original data GEO bulk
92 EBE-XVE +estradiol 0.25 >More info 0.66 >More info WT-Col-0 +estradiol shoot Original data GEO bulk
93 tcp14 0.30 >More info 0.61 >More info WT inflorescences Original data GEO bulk
94 ceh1 mutant 0.50 >More info 0.40 >More info Parent line Original data
95 GA 0.40 >More info 0.50 >More info none GA Rosette Original data GEO bulk
96 irradiated leaf (cmt 5d) 0.38 >More info 0.52 >More info control leaf (cmt 5d) rosette leaf only Original data GEO bulk
97 cpr5scv1 0.37 >More info 0.52 >More info WT(COL) Original data GEO bulk
98 Col 8h 0.26 >More info 0.63 >More info Col CA Leaves Original data
99 Light 3day wt -0.32 >More info -0.57 >More info 0h wt Original data
100 msh1 albino 0.53 >More info 0.35 >More info WT aerial part Original data GEO bulk
101 myb61 xylem 0.27 >More info 0.61 >More info wt xylem xylem Original data GEO bulk
102 Cocultivation 8 hrs leaf 0.34 >More info 0.53 >More info Mock cocultivation 8 hrs leaf Leaf Original data
103 Col-0 DCA 6d 0.32 >More info 0.54 >More info Col-0 MOCK 6d Original data GEO bulk
104 seedling 24h after Gamma atm-1 -0.33 >More info -0.53 >More info seedling day 2 unirradiated atm-1 24h Original data
105 seedling 1.5h after HZE atm-1 0.32 >More info 0.53 >More info seedling day 1 unirradiated atm-1 1.5h Original data
106 camta1 leaf water 0.35 >More info 0.50 >More info Col-0 leaf water leaf Original data GEO bulk
107 Col-0 norflurazon 0.51 >More info 0.32 >More info Col-0 control Original data GEO bulk
108 atr mock 0.54 >More info 0.29 >More info WT mock shoot apical meristem Original data
109 mbd4 mutant thaliana 10-day-old seedling 0.53 >More info 0.29 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
110 Mock pft1 leaf -0.59 >More info -0.23 >More info Mock Col-0 leaf water leaf Original data GEO bulk
111 Dry pre-dawn -0.22 >More info -0.60 >More info Wet pre-dawn water-limited whole rosette Original data GEO bulk
112 Leaf wounded 0.25 >More info 0.57 >More info Leaf control vegetative leaf Original data GEO bulk
113 mil4 BTH 0.54 >More info 0.26 >More info Col BTH rosettes Original data GEO bulk
114 exo70A1 0.52 >More info 0.27 >More info Col-0 whole plant Original data GEO bulk
115 mutant acs1A (single mutant) 0.51 >More info 0.28 >More info col control (single mutant) Original data GEO bulk
116 phyB mutant 16C 10hrs -0.58 >More info -0.20 >More info 16C 10h whole plant excluding roots Original data GEO bulk
117 04h Col-0 -0.27 >More info -0.51 >More info 00h Col-0 Original data GEO bulk
118 vtc1-1 -0.12 >More info -0.64 >More info Col-0 whole plant Original data GEO bulk
119 Full C2 T3 -0.10 >More info -0.65 >More info C2 C2del and (As)AKiin11 control T3 three days post infusion with Agrobacterium containing full-length SCTV C2 Arabidopsis rosette leaves Original data
120 phyB mutant 16C 4hrs 0.52 >More info 0.21 >More info 16C 4hs whole plant excluding roots Original data GEO bulk
121 seed germinating in countinuous light 24h SL 0.06 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
122 myb61 cork 0.23 >More info 0.50 >More info wt cork cork Original data GEO bulk
123 6h volatiles Sp. HRO-C48 0.53 >More info 0.19 >More info 6h untreated whole seedling Original data GEO bulk
124 sid2-1 cold -0.22 >More info -0.50 >More info WT cold 3 week cold entire aerial part Original data GEO bulk
125 FLIGHT TAGESB plate6 ROOTS 0.17 >More info 0.54 >More info GROUND CONTROL TAGESB plate6 ROOTS plant tissue Original data
126 Atwrky63 -0.21 >More info -0.50 >More info Col0 none leaf Original data GEO bulk
127 sex1-3 0.12 >More info 0.58 >More info Col-WT leaves Original data GEO bulk
128 Nicotinamide-53hr 0.20 >More info 0.50 >More info WT-untreated-53hr nicotinamide aerial tissue Original data GEO bulk
129 opr3 OPDA 0.5 h 0.19 >More info 0.51 >More info opr3 0 h Original data GEO bulk
130 npr1 0.51 >More info 0.17 >More info WT(COL) Original data GEO bulk
131 C58 3hpi 0.12 >More info 0.55 >More info Reference 3hpi wounded inflorescence stalk segments Original data GEO bulk
132 WT drought -0.53 >More info -0.13 >More info WT control All aerial tissue Original data GEO bulk
133 etr1 1% sucrose 12-day-old 0.54 >More info 0.12 >More info Col-0 1% sucrose 12-day-old Original data GEO bulk
134 Roots Cd -0.16 >More info -0.50 >More info Roots control Cd Root Original data GEO bulk
135 mkk1 control rep 0.54 >More info 0.11 >More info Col-0 Time 0 rep Original data GEO bulk
136 oas-a1.1 root -0.15 >More info -0.50 >More info WT-Untreated Root Original data GEO bulk
137 IAA7mII over-expressor IAA Treated -0.05 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
138 WT zebularine 5d -0.51 >More info -0.12 >More info WT mock 5d shoot apical meristem Original data
139 eds16 whole leaf 0h UI -0.13 >More info -0.50 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
140 WT 3H Cold 0.10 >More info 0.52 >More info WT control Original data GEO bulk
141 ahg2-1sid2-2 -0.55 >More info -0.04 >More info WT (Col) control Original data GEO bulk
142 siliques AtHb1 control 0.06 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
143 coi1 -0.05 >More info -0.53 >More info Col-0 Leaves Original data GEO bulk
144 bri1-116 -0.15 >More info 0.73 >More info Col seedling Original data GEO bulk
145 Shoot apex inflorescence (after bolting) -0.09 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
146 Shoot submergence 7h 0.55 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
147 Truncated AC2 T2 -0.51 >More info -0.03 >More info AC2 and AC2del control T2 two days post infusion with Agrobacterium containing a truncated version of CaLCuV AC2 Arabidopsis rosette leaves Original data
148 Brassinolide 0.5 h (det2) -0.10 >More info 0.60 >More info Mock 0.5 h (det2) Original data Basic hormone treatment of seedlings
149 CCA1-ox 6am non-polysomal -0.02 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
150 ARR22-ox -0.51 >More info 0.48 >More info Col-0 Original data Cytokinin treatment of seedlings