4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on rGRF3x35S:GIF
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List of experiments correlated with "rGRF3x35S:GIF"  Help Download transcriptome of top 30
Score Experiment Correlation from
rGRF3x35S:GIF		 Correlation to
rGRF3x35S:GIF		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 rGRF3x35S:GIF 1.00 >More info 1.00 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
2 rGRF 0.89 >More info 0.90 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
3 35S:GIF 0.83 >More info 0.88 >More info Col-0 Apices from 20 day-old plants growth in shortdays Original data
4 Laer pretreat GA Flg22 1h 0.57 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
5 low CO2 + dark 0.63 >More info 0.63 >More info normal CO2 + light Original data GEO bulk
6 Shoot dark control 24h 0.68 >More info 0.52 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
7 Light 4h steady-state -0.63 >More info -0.56 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
8 camta1-2 0.49 >More info 0.70 >More info Col-0-WT Original data GEO bulk
9 Night Time Treatment -0.55 >More info -0.63 >More info Night Time Control 1hr white light pulse aerial rosette Original data
10 Red Light 4 h 0.41 >More info 0.75 >More info White Light 4 h Original data Light treatments
11 Red/FR Light 4 h 0.51 >More info 0.64 >More info FarRed Light 4 h Original data Light treatments
12 Col-0 WT HL 3h -0.67 >More info -0.48 >More info Col-0 WT HL 0h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
13 Shoot dark control 7h 0.61 >More info 0.53 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
14 +1.6 mM Tween 20 1 h. 0.55 >More info 0.57 >More info +distilled water 1 h. Original data GEO bulk
15 seedling 24h after Gamma atm-1 -0.42 >More info -0.69 >More info seedling day 2 unirradiated atm-1 24h Original data
16 Blue Light 4 h -0.46 >More info -0.63 >More info White Light 4 h Original data Light treatments
17 mutant acs2C (single mutant) 0.61 >More info 0.48 >More info col control (single mutant) Original data GEO bulk
18 Light 4h polysome-bound -0.53 >More info -0.54 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
19 30m light -0.42 >More info -0.65 >More info before light whole seedlings Original data GEO bulk
20 CHLM overexpression -0.62 >More info -0.44 >More info Col-0 estr green tissue Original data GEO bulk
21 Drought Stress 24 h (shoot) 0.49 >More info 0.57 >More info Stress mock 24 h (shoot) Original data Stress treatments
22 mutant acs9B (single mutant) 0.56 >More info 0.49 >More info col control (single mutant) Original data GEO bulk
23 Col-0 DEX Shade 0.56 >More info 0.49 >More info Col-0 DEX WL seedlings Original data
24 Shoot submergence 24h 0.57 >More info 0.48 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
25 4h decapitation -0.47 >More info -0.58 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
26 WT cold -0.50 >More info -0.54 >More info WT control All aerial tissue Original data GEO bulk
27 leaf blade in D 0.59 >More info 0.45 >More info leaf blade in WL leaf blades Original data GEO bulk
28 TaFLS overexpression line (OE2) 0.41 >More info 0.63 >More info Col-0 Rosette leaves Original data
29 detached inflorescences 24h 0.59 >More info 0.44 >More info detached inflorescences 0h detached dark-held immature inflorescences inflorescences from the primary bolts Original data GEO bulk
30 60m light -0.44 >More info -0.57 >More info before light whole seedlings Original data GEO bulk
31 gapcp1gapcp2 ABA 0.37 >More info 0.64 >More info WT ABA ABA seedling Original data GEO bulk
32 mkk2 control rep 0.51 >More info 0.49 >More info Col-0 Time 0 rep Original data GEO bulk
33 petiole in D 0.44 >More info 0.56 >More info petiole in WL petioles Original data GEO bulk
34 WT Na2S -0.50 >More info -0.49 >More info WT water Na2S leaf Original data GEO bulk
35 petiole in FRD 0.51 >More info 0.48 >More info petiole in WL petioles Original data GEO bulk
36 FarRed Light 4 h -0.33 >More info -0.66 >More info White Light 4 h Original data Light treatments
37 fls1-3 0.48 >More info 0.51 >More info Col-0 Rosette leaves Original data
38 leaf blade in FRD 0.50 >More info 0.48 >More info leaf blade in WL leaf blades Original data GEO bulk
39 seedling 24h after Gamma WT -0.31 >More info -0.65 >More info seedling day 2 unirradiated WT 24h Original data
40 Col0-PsmES4326-24hpi 0.34 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
41 siliques AtHb1 control 0.43 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
42 Day Time Treatment -0.38 >More info -0.57 >More info Day Time Control 1hr white light pulse aerial rosette Original data
43 M6PR transgenic 0mM NaCl 0.61 >More info 0.33 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
44 Col-0 (t-zeatin 3 h) -0.59 >More info -0.35 >More info Col-0 Original data Cytokinin treatment of seedlings
45 camta1 leaf water 0.43 >More info 0.51 >More info Col-0 leaf water leaf Original data GEO bulk
46 Heat shock optimum 0.28 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
47 WT (Col) glucose -0.38 >More info -0.55 >More info WT (Col) glucose seedlings Original data GEO bulk
48 Pseudomonas 0.38 >More info 0.54 >More info Control pseudomonas treated whole seedling Original data GEO bulk
49 4C 24h -0.50 >More info -0.42 >More info 4C 0h Original data GEO bulk
50 Propiconazole 12 h 0.36 >More info 0.55 >More info Mock 12 h Original data Effect of GA inhibitors on seedlings
51 MIL4 ox 0.35 >More info 0.56 >More info Col Original data GEO bulk
52 1 h Light IP RNA -0.59 >More info -0.32 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
53 Atss3 Light1 -0.30 >More info -0.60 >More info Atss3 Dark0.5 Original data GEO bulk
54 Transgenic LEC2GR Seedling 1h Dex -0.34 >More info -0.55 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
55 gun1-1 +lincomycin -0.53 >More info -0.36 >More info Col-0 +lincomycin Original data GEO bulk
56 seedling 1.5h after HZE atm-1 0.34 >More info 0.54 >More info seedling day 1 unirradiated atm-1 1.5h Original data
57 Inflorescences Trp1 -0.24 >More info -0.64 >More info Inflorescences ler inflorescences Original data GEO bulk
58 35S::MBF1c 0.57 >More info 0.31 >More info control Original data GEO bulk
59 mil4 sid2 0.36 >More info 0.51 >More info Col rosettes Original data GEO bulk
60 G3P -0.29 >More info -0.58 >More info Mock distal leaves Original data GEO bulk
61 CDB1-Knockout 0.32 >More info 0.54 >More info WT Original data GEO bulk
62 Dark 6h wt 0.51 >More info 0.35 >More info 0h wt Original data
63 AmGSTF1 expressor 0.28 >More info 0.58 >More info WT leaf tissue Original data GEO bulk
64 tt4 0.35 >More info 0.51 >More info Col-0 aerial part Original data
65 ptpks2 -0.19 >More info -0.66 >More info Col-WT leaves Original data GEO bulk
66 mbd6 mutant thaliana 10-day-old seedling 0.58 >More info 0.27 >More info WT thaliana 10-day-old seedling 10 days old seedling Original data
67 Heat no recovery -0.55 >More info -0.29 >More info Mock no recovery seedling Original data GEO bulk
68 CHLD reduction -0.52 >More info -0.32 >More info Col-0 dex green tissue Original data GEO bulk
69 tt4 -0.55 >More info -0.29 >More info WT aerial region Original data GEO bulk
70 AtMYB30-ox T0 -0.55 >More info -0.29 >More info WT T0 Original data GEO bulk
71 sfr6 drought -0.50 >More info -0.33 >More info WT drought All aerial tissue Original data GEO bulk
72 php 0.50 >More info 0.32 >More info WT Original data GEO bulk
73 Leafminer damaged seedlings 0.25 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
74 HSP90 Reduced hsp90.2 0.57 >More info 0.24 >More info HSP90 Reduced Control All aerial tissue Original data GEO bulk
75 IAA7mII over-expressor IAA Treated 0.12 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
76 Leaf systemic -0.23 >More info -0.58 >More info Leaf control vegetative leaf Original data GEO bulk
77 exo70A1 0.53 >More info 0.27 >More info Col-0 whole plant Original data GEO bulk
78 long 10-degree- -0.24 >More info -0.55 >More info control long Original data GEO bulk
79 erf104-ko H2O 4h -0.29 >More info -0.50 >More info Col-0 H2O 4h Original data GEO bulk
80 WT Atum 2h 0.27 >More info 0.50 >More info WT 0h Leaf tissue Original data GEO bulk
81 npr1 sni1 ssn2 -0.25 >More info -0.52 >More info npr1 sni1 water water seedling Original data GEO bulk
82 WT Red light 1h -0.23 >More info -0.54 >More info WT Dark 1h deetiolated seedling Original data GEO bulk
83 estradiole-induced ANAC059 -0.22 >More info -0.54 >More info transgenic (empty vector inducible system) Original data GEO bulk
84 4C 1h -0.16 >More info -0.60 >More info 4C 0h Original data GEO bulk
85 mkk1 24h BTH rep 0.17 >More info 0.57 >More info Col-0 24h BTH rep Original data GEO bulk
86 penta mutant (higher order mutant) 0.16 >More info 0.58 >More info col control (higher order mutant) Original data GEO bulk
87 tcp14 0.19 >More info 0.55 >More info WT inflorescences Original data GEO bulk
88 Col BTH 0.07 >More info 0.67 >More info Col rosettes Original data GEO bulk
89 A2hsfa1-ox in quadruple mutant -0.54 >More info -0.19 >More info hsfa1 quadruple mutant whole seedling Original data GEO bulk
90 MYB12OX/tt4 0.20 >More info 0.53 >More info Col-0 aerial part Original data
91 35S:RPS4 rrs1-11 2h 0.63 >More info 0.08 >More info 35S:RPS4 2h leaves Original data
92 long 17-degree- -0.15 >More info -0.55 >More info control long Original data GEO bulk
93 sfr3 control -0.58 >More info -0.12 >More info WT control All aerial tissue Original data GEO bulk
94 GRX-overexpression seedlings control 0.13 >More info 0.57 >More info WT seedlings control Seedlings Original data GEO bulk
95 dde2-2 24hpi A. brassicicola -0.19 >More info -0.51 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
96 Wt-BA-sample 0.19 >More info 0.51 >More info Wt-dmso-sample seedling Original data
97 Laer pretreat GA Flg22 2h 0.53 >More info 0.16 >More info Laer pretreat water control leaf discs Original data GEO bulk
98 RRE1 -0.63 >More info -0.06 >More info Col C Original data GEO bulk
99 efr-1 +elf18 10h -0.51 >More info -0.18 >More info WT +elf18 10h elf18 Original data GEO bulk
100 ape2 high light 0.16 >More info 0.52 >More info Ws-2 high light Original data GEO bulk
101 Light 0.5h polysome-bound -0.11 >More info -0.57 >More info Dark polysome-bound white light seedlings (aerial parts) Original data GEO bulk
102 cov1 cov2 stem Top -0.52 >More info -0.15 >More info WT stem Top stem Top Original data GEO bulk
103 35S:RPS4 eds1-2 2h 0.12 >More info 0.55 >More info 35S:RPS4 2h leaves Original data
104 CCA1-ox 6am non-polysomal 0.16 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
105 FarRed Light 45min 0.11 >More info 0.55 >More info White Light 45min Original data Light treatments
106 21h-DC3000 avrRpm1 -0.13 >More info -0.53 >More info 21h-DC3000 leaves Original data GEO bulk
107 Laer pretreat GA Flg22 0h 0.52 >More info 0.13 >More info Laer pretreat water control leaf discs Original data GEO bulk
108 Dark 40 min pls UV-A 5 min -0.13 >More info -0.52 >More info Dark 45 min Original data Light treatments
109 12h volatiles Sm. R3089 0.14 >More info 0.51 >More info 12h untreated whole seedling Original data GEO bulk
110 arf2 mock 0.55 >More info 0.09 >More info Col mock Original data GEO bulk
111 Mutant arf2 (etiol) 0.55 >More info 0.09 >More info Col (etiol) Original data GEO bulk
112 Shoot submergence 7h 0.62 >More info -0.00 >More info Shoot light control 7 h submergence in darkness whole shoot Original data GEO bulk
113 seedlings protease IV 0.53 >More info 0.09 >More info seedlings nontreated control whole seedling Original data
114 BI-1-3h IAA -0.56 >More info -0.05 >More info BI-1-0h IAA whole plant Original data GEO bulk
115 Laer Flg22 2h 0.50 >More info 0.11 >More info Laer Control leaf discs Original data GEO bulk
116 seed germinating in countinuous light 24h SL -0.08 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
117 ALC Toc1 light-light EtOH -0.51 >More info -0.08 >More info Col light-light EtOH 2.5% ethanol Original data GEO bulk
118 bri1-116 -0.14 >More info 0.73 >More info Col seedling Original data GEO bulk
119 Te ozone 0.50 >More info 0.07 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
120 short 12-degree- -0.04 >More info -0.53 >More info control short Original data GEO bulk
121 Light 0.5h steady-state -0.00 >More info -0.57 >More info Dark steady-state white light seedlings (aerial parts) Original data GEO bulk
122 CBF3 100mM NaCl 0.02 >More info 0.54 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
123 gai Control 0.51 >More info 0.04 >More info Laer Control leaf discs Original data GEO bulk
124 aerial organ callus inducing medium 12 h 0.00 >More info 0.54 >More info aerial organ callus inducing medium 0 h 12 hours after incubating on callus inducing medium aerial organ explants Original data GEO bulk
125 L2.4 mutant -0.51 >More info -0.02 >More info Wt Original data GEO bulk
126 Shoot apex inflorescence (after bolting) -0.12 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
127 pab polysome -0.56 >More info 0.04 >More info WT polysome seedling shoot/aerial seedling Original data
128 bZIP1ko mutant N-Light- -0.53 >More info 0.01 >More info WT-sib N-Light- whole plant Original data GEO bulk
129 rao2 H2O2 3h 0.54 >More info -0.04 >More info WT H2O2 3h 3h_H2O2 Original data GEO bulk
130 GRX-overexpression seedlings NaCl -0.00 >More info 0.50 >More info WT seedlings NaCl Seedlings Original data GEO bulk
131 Laer GA 1h -0.02 >More info 0.50 >More info Laer Control leaf discs Original data GEO bulk
132 ahg2-1abi1-1 0.52 >More info -0.06 >More info WT (Col) control Original data GEO bulk
133 Brassinolide 1 h (det2) 0.08 >More info -0.50 >More info Mock 1 h (det2) Original data Basic hormone treatment of seedlings
134 Col-0 RNAi-MBS2/mbs1-1 HL 3h -0.50 >More info 0.19 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data