4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on Col 1d
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "Col 1d"  Help Download transcriptome of top 30
Score Experiment Correlation from
Col 1d		 Correlation to
Col 1d		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Col 1d 1.00 >More info 1.00 >More info Col CA Leaves Original data
2 Rsch 1d 0.88 >More info 0.91 >More info Rsch CA Leaves Original data
3 Rsch 8h 0.85 >More info 0.92 >More info Rsch CA Leaves Original data
4 Col 8h 0.86 >More info 0.89 >More info Col CA Leaves Original data
5 Te 1d 0.87 >More info 0.86 >More info Te CA Leaves Original data
6 Col 3d 0.85 >More info 0.85 >More info Col CA Leaves Original data
7 Te 8h 0.81 >More info 0.88 >More info Te CA Leaves Original data
8 Te 3d 0.84 >More info 0.85 >More info Te CA Leaves Original data
9 Rsch 3d 0.80 >More info 0.81 >More info Rsch CA Leaves Original data
10 rosette Light Wounded 0.76 >More info 0.72 >More info rosette Light Control Original data GEO bulk
11 WT 6H Cold 0.73 >More info 0.72 >More info WT control Original data GEO bulk
12 rosette Dark Wounded 0.75 >More info 0.66 >More info rosette Dark Control Original data GEO bulk
13 fls1-3 0.66 >More info 0.72 >More info Col-0 Rosette leaves Original data
14 WT 24H Cold 0.67 >More info 0.71 >More info WT control Original data GEO bulk
15 short 8-degree- 0.66 >More info 0.71 >More info control short Original data GEO bulk
16 Wounding Stress3 h (shoot) 0.66 >More info 0.71 >More info Stress mock 3 h (shoot) Original data Stress treatments
17 Cold Stress 24 h (shoot) 0.69 >More info 0.67 >More info Stress mock 24 h (shoot) Original data Stress treatments
18 short 10-degree- 0.65 >More info 0.70 >More info control short Original data GEO bulk
19 wt systemic wounding 0.64 >More info 0.71 >More info wt control leaves Original data GEO bulk
20 ws 24h4c q8ws 0.67 >More info 0.63 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
21 camta1/2 warm -0.69 >More info -0.61 >More info WT 24h cold entire aerial part Original data GEO bulk
22 Total RNA csp1 cold 0.57 >More info 0.66 >More info Total RNA csp1 12h cold (4C) rosettes Original data GEO bulk
23 leaf13 0.65 >More info 0.58 >More info unwounded leaves none Original data GEO bulk
24 4C 24h(SOIL) 0.59 >More info 0.63 >More info 4C 0h(SOIL) Original data GEO bulk
25 WT 24h cold 0.65 >More info 0.56 >More info WT warm 24h cold entire aerial part Original data GEO bulk
26 WT cold 12 h 0.58 >More info 0.62 >More info WT cold 0h GSM955987 seedlings Original data GEO bulk
27 short 12-degree- 0.60 >More info 0.59 >More info control short Original data GEO bulk
28 Laer pretreat JA Flg22 1h 0.59 >More info 0.60 >More info Laer pretreat water control leaf discs Original data GEO bulk
29 Cold Stress 24 h (root) 0.60 >More info 0.59 >More info Stress mock 24 h (root) Original data Stress treatments
30 Col-0-avrB-6h 0.56 >More info 0.62 >More info Col-0-untreated-control avrB leaf tissue Original data GEO bulk
31 flu over-tAPX 0.66 >More info 0.52 >More info WT Col Original data GEO bulk
32 Leafminer locally damaged thaliana seedlings 0.61 >More info 0.57 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
33 Atss3 Dark4 -0.59 >More info -0.59 >More info Atss3 Dark0.5 Original data GEO bulk
34 Laer pretreat GA Flg22 1h 0.47 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
35 flu 0.62 >More info 0.55 >More info WT Col Original data GEO bulk
36 Leafminer damaged seedlings 0.61 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
37 col 24h4c set4 0.64 >More info 0.52 >More info col 0h4c cold-treated moved to a 4C chamber for 24h whole seedlings Original data
38 DC3000 7h 0.58 >More info 0.57 >More info Mock 7h DC3000 Original data GEO bulk
39 4C 24h 0.59 >More info 0.56 >More info 4C 0h Original data GEO bulk
40 Col leaf 100mM NaCl 0.62 >More info 0.52 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
41 Col leaf 100mM NaCl 0.62 >More info 0.52 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
42 Col 100mM NaCl 0.62 >More info 0.52 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
43 col-5 DC3000-avrRpm 4h 0.57 >More info 0.57 >More info col-5 MgCl2 4h Whole leaf Original data GEO bulk
44 Atss3 Dark8 -0.58 >More info -0.53 >More info Atss3 Dark0.5 Original data GEO bulk
45 current injection 0.40 >More info 0.71 >More info no current injection 4 microampere of electric current for 1 second Original data GEO bulk
46 Laer Flg22+GA 1h 0.60 >More info 0.50 >More info Laer Control leaf discs Original data GEO bulk
47 Heat shock optimum 0.45 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
48 WT 3H Cold 0.43 >More info 0.67 >More info WT control Original data GEO bulk
49 col-5 hrpA 12h 0.55 >More info 0.54 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
50 WT cold 24h 0.51 >More info 0.57 >More info WT cold 0h cold at 4°C seedlings Original data GEO bulk
51 Atss3 Light4 -0.58 >More info -0.50 >More info Atss3 Dark0.5 Original data GEO bulk
52 Laer pretreat JA Flg22 2h 0.59 >More info 0.48 >More info Laer pretreat water control leaf discs Original data GEO bulk
53 col-5 hrpA 2h 0.54 >More info 0.52 >More info col-5 MgCl2 2h Whole leaf Original data GEO bulk
54 Pst-DC3000(avrRpm1)-4hpi 0.47 >More info 0.59 >More info Pst-DC3000-4hpi Original data GEO bulk
55 Laer Flg22 1h 0.56 >More info 0.49 >More info Laer Control leaf discs Original data GEO bulk
56 Laer pretreat GA+JA Flg22 1h 0.56 >More info 0.49 >More info Laer pretreat water control leaf discs Original data GEO bulk
57 col-5 DC3000 12h 0.53 >More info 0.52 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
58 Transgenic LEC2GR Seedling 1h Dex 0.49 >More info 0.56 >More info Transgenic LEC2GR Seedling 0h Dex Original data GEO bulk
59 npr1-3 MOCK 48h -0.59 >More info -0.45 >More info Col-0 MOCK 48h Original data GEO bulk
60 gai MeJA 1h -0.54 >More info -0.49 >More info Laer MeJA 1h leaf discs Original data GEO bulk
61 seedlings protease IV 0.54 >More info 0.49 >More info seedlings nontreated control whole seedling Original data
62 sid2-2 9 hpi A. brassicicola 0.56 >More info 0.47 >More info Col-0 9 hpi mock 3rd-5th true leaves Original data
63 AvrRpt2 Col-0 6hpi 0.62 >More info 0.40 >More info AvrRpt2 Col-0 0hpi Infiltration of Psm mature leaf Original data
64 atgsnor1-3-avrB-6h 0.56 >More info 0.46 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
65 HopZ1a treated 0.53 >More info 0.49 >More info col Original data GEO bulk
66 coi1-PsmES4326-24hpi -0.45 >More info -0.57 >More info Col0-PsmES4326-24hpi PsmES4326 leaf Original data GEO bulk
67 WT NAA/flg 1h 0.50 >More info 0.51 >More info WT 0h Leaf tissue Original data GEO bulk
68 Col-0 flu HL 3h 0.60 >More info 0.41 >More info Col-0 WT HL 3h HL stress (1 µE m−2 s−1) whole seedlings without root Original data
69 hrcC 0.56 >More info 0.45 >More info MgCl2 5x10^7 cfu/ml DC3000 hrcC mutant Original data GEO bulk
70 HopZ1a treated ulp1c ulp1d 0.50 >More info 0.51 >More info col Original data GEO bulk
71 WT flg22 2h 0.58 >More info 0.43 >More info WT 0h Leaf tissue Original data GEO bulk
72 dTLEc systemic wounding -0.57 >More info -0.43 >More info wt systemic wounding leaves Original data GEO bulk
73 WT flg22 1h 0.50 >More info 0.50 >More info WT 0h Leaf tissue Original data GEO bulk
74 short 14-degree- 0.45 >More info 0.54 >More info control short Original data GEO bulk
75 Laer pretreat GA+JA Flg22 0h 0.55 >More info 0.43 >More info Laer pretreat water control leaf discs Original data GEO bulk
76 gun1gun5 far-red pretreated -0.51 >More info -0.47 >More info WT far-red pretreated Original data GEO bulk
77 SHR-GR Time 1H Dex 0.47 >More info 0.51 >More info SHR-GR Time 0H Dex Dex media for 1 hour Original data GEO bulk
78 Pto inoculated 0.47 >More info 0.51 >More info col Original data GEO bulk
79 WT no Pi 0.52 >More info 0.45 >More info WT complete seedlings Original data
80 Col0-PsmES4326-24hpi 0.36 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
81 CMV-A2b mutant 0.46 >More info 0.51 >More info Mock-At Aerial tissues Original data GEO bulk
82 Col(gl) 0mM NaCl 0.53 >More info 0.43 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
83 Col(gl) leaf 0mM NaCl 0.53 >More info 0.43 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
84 M6PR transgenic leaf 0mM NaCl 0.51 >More info 0.45 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
85 Methyl Jasmonate 1 h 0.38 >More info 0.58 >More info Mock 1 h Original data Basic hormone treatment of seedlings
86 hrpA fliC 7h 0.44 >More info 0.52 >More info Mock 7h hrpA fliC Original data GEO bulk
87 aox1a:rpoTmp MLD stressed -0.57 >More info -0.38 >More info WT(Col0) MLD stressed (control aox1a:rpoTmp) leaf Original data
88 Laer pretreat GA+JA Flg22 2h 0.54 >More info 0.41 >More info Laer pretreat water control leaf discs Original data GEO bulk
89 tunicamycin -0.43 >More info -0.52 >More info DMF Original data GEO bulk
90 Botrytis cinerea 48h 0.51 >More info 0.43 >More info control 48h Original data GEO bulk
91 WT resupplied Pi 4h 0.53 >More info 0.40 >More info WT complete seedlings Original data
92 Col-Luc WT 3h antimycin A 0.53 >More info 0.40 >More info Col-Luc WT mock 50 µM antimycin A for 3 hours whole green tissue Original data GEO bulk
93 Seedling KUA1-IOX est 0.26 >More info 0.67 >More info Seedling KUA1-IOX mock Original data
94 sid2-avrB-6h 0.52 >More info 0.41 >More info Col-0-avrB-6h avrB leaf tissue Original data GEO bulk
95 MYB46-GR DEX 0.30 >More info 0.63 >More info MYB46-GR mock Young rosette leaves (5-7th) Original data GEO bulk
96 wnk8-2 untreated -0.43 >More info -0.50 >More info Col-0 untreated seedlings Original data GEO bulk
97 gpa1 -ABA LF 0.36 >More info 0.57 >More info Col-0 -ABA LF Leaves of five week-old plants Original data GEO bulk
98 elevated CO2 high Mg shoot -0.54 >More info -0.38 >More info atmospheric CO2 high Mg shoot Shoot Original data
99 Col-0 drought 0.51 >More info 0.40 >More info Col-0 control Original data GEO bulk
100 Full AC2 T1 0.56 >More info 0.34 >More info AC2 and AC2del control T1 one day post infusion with Agrobacterium containing full-length CaLCuV AC2 Arabidopsis rosette leaves Original data
101 gpa1-4/agb1-2 ozone 2d -0.28 >More info -0.62 >More info Col ozone 2d ozone Original data GEO bulk
102 Col-O low light -0.51 >More info -0.38 >More info Col-O bule light Original data GEO bulk
103 Ambient CO2 fully expanded leaf -0.50 >More info -0.39 >More info Control for tissue data fully expanded leaf Original data
104 oas-a1.1 Cd 24h 0.32 >More info 0.57 >More info Cd 24h root Shoot Original data GEO bulk
105 Laer Flg22+GA 2h 0.51 >More info 0.37 >More info Laer Control leaf discs Original data GEO bulk
106 coronatine 0.52 >More info 0.36 >More info control rosette leaves Original data
107 root callus inducing medium 96 h -0.54 >More info -0.32 >More info root callus inducing medium 0 h 96 hours after incubating on callus inducing medium root explants Original data GEO bulk
108 epiF3 0.32 >More info 0.54 >More info WT Col-0 aerial part Original data
109 JA 3h 0.29 >More info 0.56 >More info EtOH 3h 3hr Original data GEO bulk
110 dde2-2 24hpi A. brassicicola -0.50 >More info -0.35 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
111 atmospheric CO2 high Mg shoot 0.53 >More info 0.31 >More info atmospheric CO2 normal Mg shoot Shoot Original data
112 root callus inducing medium 48 h -0.52 >More info -0.32 >More info root callus inducing medium 0 h 48 hours after incubating on callus inducing medium root explants Original data GEO bulk
113 root callus inducing medium 24h -0.52 >More info -0.32 >More info root callus inducing medium 0 h 24 hours after incubating on callus inducing medium root explants Original data GEO bulk
114 IAA7mII over-expressor IAA Treated 0.15 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
115 1h +Pi -0.28 >More info -0.55 >More info 1h -Pi root Original data GEO bulk
116 Laer MeJA 1h 0.51 >More info 0.31 >More info Laer Control leaf discs Original data GEO bulk
117 Laer Flg22 2h 0.50 >More info 0.31 >More info Laer Control leaf discs Original data GEO bulk
118 glk1 glk2 GLK1-GR +DEX 4h -0.22 >More info -0.59 >More info glk1 glk2 GLK1-GR mock 4h dexamethasone whole seedlings Original data GEO bulk
119 Col-0 ozone 0.53 >More info 0.27 >More info Col-0 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
120 rdr6-15 -0.28 >More info -0.52 >More info Col-0 plant inflorescence Original data
121 35S:VND7-VP16-GR+CHX 0.25 >More info 0.54 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
122 4C 2h(SOIL) 0.21 >More info 0.58 >More info 4C 0h(SOIL) Original data GEO bulk
123 Col-0 ozone- (control genotype tga2 tag5 tga6) 0.51 >More info 0.27 >More info Col-0 ctrl (control genotype tga2 tag5 tga6) 350 ppb ozone exposure for 2hr Original data
124 Mutant sav3-2 (SH) -0.28 >More info -0.50 >More info Col-0 (SH) Original data GEO bulk
125 RRE2 -0.24 >More info -0.54 >More info Col C Original data GEO bulk
126 gapcp1gapcp2 ABA 0.22 >More info 0.56 >More info WT ABA ABA seedling Original data GEO bulk
127 sav3-2 shade -0.28 >More info -0.50 >More info Col-0 shade seedlings Original data GEO bulk
128 CT101 ozone 0.52 >More info 0.25 >More info CT101 ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
129 coi1-16 ein2 sid2 ctrl -0.52 >More info -0.25 >More info Col-0 ozone- (control genotype coi1-16 ein2 sid2) control Original data
130 Col-0 ozone- (control genotype coi1-16 ein2 sid2) 0.53 >More info 0.23 >More info Col-0 ctrl (control genotype coi1-16 ein2 sid2) 350 ppb ozone exposure for 2hr Original data
131 Mutant sav3-2 (WL) -0.10 >More info -0.65 >More info Col-0 (WL) Original data GEO bulk
132 eds16 whole leaf 6hpi 0.25 >More info 0.50 >More info Col whole leaf 6hpi whole leaf Original data GEO bulk
133 aphid infested -0.21 >More info -0.54 >More info control aphid infested Leaves Original data GEO bulk
134 aphid infested -0.21 >More info -0.54 >More info CTR Original data GEO bulk
135 sav3-2 light -0.10 >More info -0.65 >More info Col-0 light seedlings Original data GEO bulk
136 Te ozone 0.53 >More info 0.20 >More info Te ctrl 350 ppb ozone exposure for 2hr whole rosette Original data
137 wrky33 mock 0.54 >More info 0.19 >More info WT mock 14 hour mock control leaves Original data
138 ref6-1 0.22 >More info 0.50 >More info Col whole seedling Original data GEO bulk
139 aln-1 0.61 >More info 0.10 >More info Col-0 Aerial part of seedlings Original data
140 opr3 JA 0.5 h 0.10 >More info 0.60 >More info opr3 0 h Original data GEO bulk
141 RGA-GR-DEX 0.09 >More info 0.59 >More info RGA-GR-MOCK DEX inflorescence Original data GEO bulk
142 GRX-overexpression seedlings IAA 0.15 >More info 0.51 >More info WT seedlings IAA Seedlings Original data GEO bulk
143 eds16 whole leaf 3dpi 0.08 >More info 0.58 >More info Col whole leaf 3dpi whole leaf Original data GEO bulk
144 roottip hypoxia pSCR -0.11 >More info -0.52 >More info roottip hypoxia total hypoxia roottip Original data GEO bulk
145 atmyc2 Seedling BL+ABA -0.11 >More info -0.52 >More info WT Seedling BL+ABA Original data GEO bulk
146 ani1 T0.5 -0.13 >More info -0.50 >More info WT T0.5 root tissue Original data GEO bulk
147 CBF3 100mM NaCl 0.11 >More info 0.50 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
148 spx1 spx2 no Pi 0.50 >More info 0.07 >More info WT no Pi seedlings Original data
149 35S::CBF2 0.07 >More info 0.50 >More info Ws2 Original data GEO bulk
150 Col BTH -0.14 >More info 0.67 >More info Col rosettes Original data GEO bulk
151 seed germinating in countinuous light 24h SL -0.18 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
152 CCA1-ox 6am non-polysomal -0.02 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
153 bri1-116 -0.27 >More info 0.73 >More info Col seedling Original data GEO bulk
154 xyl-grown cell culture- 1h 1mM Suc 0.17 >More info -0.60 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
155 Shoot apex inflorescence (after bolting) -0.27 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
156 siliques AtHb1 control -0.23 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk