4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on abi3-6 16 DAF Seed
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List of experiments correlated with "abi3-6 16 DAF Seed"  Help Download transcriptome of top 30
Score Experiment Correlation from
abi3-6 16 DAF Seed		 Correlation to
abi3-6 16 DAF Seed		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 abi3-6 16 DAF Seed 1.00 >More info 1.00 >More info WT (Col-0) 16 DAF Seed developing seeds dissected from sliques Original data
2 abi3-6 12 DAF Seed 0.86 >More info 0.88 >More info WT (Col-0) 12 DAF Seed-3 developing seeds dissected from sliques Original data
3 24h SL Attim 17-1 1 0.81 >More info 0.83 >More info 0 h Attim 17-1 1 seed Original data
4 24h SL WT 0.81 >More info 0.81 >More info 0 h WT seed Original data
5 fus3-3 12 DAF Seed 0.79 >More info 0.79 >More info WT (Col-0) 12 DAF Seed-3 developing seeds dissected from sliques Original data
6 Imbibed 24 h ABA 30uM (seed) -0.74 >More info -0.78 >More info Imbibed 24 h (seed) Original data Effect of ABA during seed imbibition
7 6 h SL Attim 17-1 1 0.73 >More info 0.79 >More info 0 h Attim 17-1 1 seed Original data
8 6 h SL WT 0.72 >More info 0.78 >More info 0 h WT seed Original data
9 48 h S Attim 17-1 1 0.68 >More info 0.77 >More info 0 h Attim 17-1 1 seed Original data
10 embryo ABA -0.72 >More info -0.69 >More info embryo-control ABA embryo Original data GEO bulk
11 lec1-1 12 DAF Seed 0.73 >More info 0.66 >More info WT (WS) 12 DAF Seed developing seeds dissected from sliques Original data
12 embryo paclobutrazol -0.74 >More info -0.64 >More info embryo-control paclobutrazol embryo Original data GEO bulk
13 48 h S WT 0.61 >More info 0.73 >More info 0 h WT seed Original data
14 Col-0 red light 0.66 >More info 0.64 >More info Col-0 dark Original data GEO bulk
15 etiolated atbzip16 -0.63 >More info -0.63 >More info etiolated Ler etiolated aerial part of seedlings Original data GEO bulk
16 ahg1-1 -0.63 >More info -0.61 >More info ABA control Original data GEO bulk
17 GA4 3 h (ga1 seed) -0.67 >More info -0.51 >More info Mock 3 h Original data Effect of gibberellin during seed imbibition
18 seed germinating in countinuous light 24h SL 0.50 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
19 Shoot apex inflorescence (after bolting) 0.51 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
20 Heat and anoxia -0.53 >More info -0.59 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
21 seed germinating in countinuous light 48 h SL 0.59 >More info 0.53 >More info Control for tissue data seed Original data GEO bulk
22 pil5 red light -0.67 >More info -0.44 >More info Col-0 red light Original data GEO bulk
23 phyABCDE Dark -0.55 >More info -0.56 >More info WT Dark Dark whole seedling Original data GEO bulk
24 erf104-ko Flg22 4h -0.46 >More info -0.64 >More info erf104-ko H2O 4h Original data GEO bulk
25 ABA control -0.42 >More info -0.68 >More info No ABA control Original data GEO bulk
26 Imbibed 24 h ABA 3uM (seed) -0.66 >More info -0.43 >More info Imbibed 24 h (seed) Original data Effect of ABA during seed imbibition
27 pif1pif3pif4pif5 mutant (pifq) 0.55 >More info 0.54 >More info WT (col) Original data GEO bulk
28 WT cotyledons 0.58 >More info 0.51 >More info Control for tissue data cotyledons Original data
29 AsAKiin11 T2 -0.49 >More info -0.60 >More info C2 C2del and (As)AKiin11 control T2 two days post infusion with Agrobacterium containing antisense (As)AKiin11 Arabidopsis rosette leaves Original data
30 phyABCDE Rc50 0.59 >More info 0.48 >More info phyABCDE Dark red light whole seedling Original data GEO bulk
31 clf-28 swn-7 -0.53 >More info -0.53 >More info Col whole plant Original data GEO bulk
32 B5 +AA -0.52 >More info -0.53 >More info B5 -AA B5 media and treated with AA Original data
33 Heat -0.50 >More info -0.55 >More info Control 90 minutes at 38°C. Original data GEO bulk
34 Seedling-HeatStressed TOTALmRNA -0.47 >More info -0.58 >More info Seedling-control TOTALmRNA seedling Original data
35 Ambient CO2 leaf primordia 0.53 >More info 0.51 >More info Control for tissue data leaf primordia Original data
36 Shoot apex vegetative &Young leaves 0.53 >More info 0.49 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
37 Shoot apex vegetative 0.53 >More info 0.49 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
38 Seedling KUA1-IOX est -0.40 >More info -0.62 >More info Seedling KUA1-IOX mock Original data
39 rosettes WT drought -0.53 >More info -0.48 >More info rosettes WT watered Original data GEO bulk
40 Apex 14DAS 0.53 >More info 0.48 >More info Control for tissue data Original data GEO bulk
41 NAA +AA -0.51 >More info -0.50 >More info NAA -AA B5 media supplemented with 4.5 µM NAA and treated with AA Original data
42 ABA DFPM -0.55 >More info -0.46 >More info control Original data GEO bulk
43 hda9 dryseed 0.54 >More info 0.46 >More info Col dryseed dry seeds Original data
44 seedling 0.51 >More info 0.49 >More info Control for tissue data seedling Original data GEO bulk
45 Laer treat paclobutrazol (PAC) -0.47 >More info -0.53 >More info Laer Control leaf discs Original data GEO bulk
46 Fenclorim 24hr -0.49 >More info -0.51 >More info Acetone 24hr root Original data GEO bulk
47 pskr1-5 0.46 >More info 0.54 >More info wild type Cotyledons Original data GEO bulk
48 Emwa1 inoculated psk 3 dpi 0.48 >More info 0.52 >More info Emwa1 inoculated WT 3 dpi Cotyledons Original data GEO bulk
49 Seedling-HeatStressed POLYSOMESmRNA -0.45 >More info -0.55 >More info Seedling-control POLYSOMESmRNA seedling Original data
50 rosettes myoox drought -0.51 >More info -0.48 >More info rosettes myoox watered Original data GEO bulk
51 Cor 10h -0.49 >More info -0.50 >More info Mock 10h Cor Original data GEO bulk
52 col-5 hrpA 12h -0.42 >More info -0.57 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
53 Rosette leaf No12 0.51 >More info 0.47 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
54 Expanding leaf 0.53 >More info 0.45 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
55 vtc2 day 7 induction 0.55 >More info 0.43 >More info WT day 7 induction day 7 induction of somatic embryogenesis Original data GEO bulk
56 Shoot apex transition (before bolting) 0.52 >More info 0.46 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
57 csn4-1 dark -0.62 >More info -0.36 >More info WT light Original data GEO bulk
58 Ambient CO2 expanding leaf 0.50 >More info 0.48 >More info Control for tissue data expanding leaf Original data
59 CMP 24hr -0.48 >More info -0.50 >More info Acetone 24hr root Original data GEO bulk
60 Cor hrpS 10h -0.42 >More info -0.56 >More info Mock 10h Cor hrpS Original data GEO bulk
61 DFPM -0.52 >More info -0.45 >More info control Original data GEO bulk
62 Imbibed 3 h (seed) 0.43 >More info 0.54 >More info Dry seed Original data Time course of early seed germination
63 dark-hs -0.41 >More info -0.56 >More info dark-control seedling Original data
64 Col leaf scrape 5 dpi -0.50 >More info -0.46 >More info Col whole leaf 5d UI leaf section scrapes Original data GEO bulk
65 bak1-3 +Pep2 10h -0.45 >More info -0.50 >More info WT +Pep2 10h Pep2 Original data GEO bulk
66 E.coli TUV86 2 fliC 7h -0.42 >More info -0.53 >More info Mock 7h E.coli TUV86 2 fliC Original data GEO bulk
67 col-5 DC3000 12h -0.41 >More info -0.54 >More info col-5 MgCl2 12h Whole leaf Original data GEO bulk
68 Apex 5DAS 0.50 >More info 0.44 >More info Control for tissue data Original data GEO bulk
69 Sulfometuron EC50 -0.50 >More info -0.43 >More info Carrier Original data GEO bulk
70 Ws HS -0.41 >More info -0.52 >More info Ws control heat shocked seedling Original data GEO bulk
71 Hypocotyl 0.50 >More info 0.41 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
72 mdh -0.33 >More info -0.58 >More info Col Original data GEO bulk
73 Flower (stage12) 0.50 >More info 0.40 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
74 Flagellin 4 h (leaf) -0.40 >More info -0.50 >More info Mock 4 h (leaf) Original data Elicitor treatments
75 efr-1 +elf18 10h 0.40 >More info 0.50 >More info WT +elf18 10h elf18 Original data GEO bulk
76 seedling -S Exp -0.40 >More info -0.50 >More info seedling FN Exp seedling Original data
77 Dark 4 h pls RedLight 1min 0.33 >More info 0.57 >More info Dark 4 h Original data Light treatments
78 pil5 dark 0.38 >More info 0.51 >More info Col-0 dark Original data GEO bulk
79 Anoxia -0.38 >More info -0.51 >More info Control anoxia for 6h at 23°C in the dark. Original data GEO bulk
80 bri1-116 0.16 >More info 0.73 >More info Col seedling Original data GEO bulk
81 T101D 10mM NH4NO3 -0.27 >More info -0.62 >More info col 10mM NH4NO3 Root Original data
82 6h +Pi 0.54 >More info 0.34 >More info 6h -Pi root Original data GEO bulk
83 low CO2 + light -0.33 >More info -0.54 >More info normal CO2 + light Original data GEO bulk
84 Col ozone 3h -0.35 >More info -0.52 >More info Col clean-air 3h ozone Original data GEO bulk
85 hrpA 7h -0.35 >More info -0.52 >More info Mock 7h hrpA Original data GEO bulk
86 E.coli 0157 H7 7h -0.35 >More info -0.52 >More info Mock 7h E.coli 0157 H7 Original data GEO bulk
87 csn5 (csn5a-2 csn5b) light -0.52 >More info -0.34 >More info WT light Original data GEO bulk
88 GST NPP1 4 h (leaf) -0.35 >More info -0.51 >More info Mock 4 h (leaf) Original data Elicitor treatments
89 Nicotinamide-81hr -0.51 >More info -0.34 >More info WT-untreated-81hr nicotinamide aerial tissue Original data GEO bulk
90 Heat shock optimum 0.19 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
91 seed during stratification 1 h S -0.61 >More info -0.23 >More info Control for tissue data seed Original data GEO bulk
92 piffq 2d WL -0.25 >More info -0.59 >More info WT 2d WL whole seedling Original data GEO bulk
93 Nicotinamide-85hr -0.52 >More info -0.31 >More info WT-untreated-85hr nicotinamide aerial tissue Original data GEO bulk
94 seed freshly harvested H -0.60 >More info -0.21 >More info Control for tissue data seed Original data GEO bulk
95 Col dryseed -0.57 >More info -0.23 >More info Control for tissue data dry seeds Original data
96 seed during stratification 12 h S -0.59 >More info -0.20 >More info Control for tissue data seed Original data GEO bulk
97 dry seed 0 h -0.59 >More info -0.20 >More info Control for tissue data seed Original data GEO bulk
98 Mutant pif1-2 (Dark etiol) -0.24 >More info -0.55 >More info Col-0 (Dark etiol) Original data GEO bulk
99 pif1-2 dark -0.24 >More info -0.55 >More info Wt dark Original data GEO bulk
100 endosperm paclobutrazol -0.57 >More info -0.22 >More info endosperm-control paclobutrazol endosperm Original data GEO bulk
101 ARF10 0.54 >More info 0.24 >More info Col-0 Original data GEO bulk
102 GST 4 h (leaf) -0.23 >More info -0.55 >More info Mock 4 h (leaf) Original data Elicitor treatments
103 35S::ERF104 Flg22 4h -0.27 >More info -0.51 >More info 35S::ERF104 H2O 4h Original data GEO bulk
104 35S:VND7-VP16-GR+CHX -0.25 >More info -0.53 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
105 ABI3GR +DEX +CHX -0.23 >More info -0.55 >More info ABI3GR -DEX +CHX DEX CHX root/protoplasts Original data GEO bulk
106 2hr continuous KNO3 ECR cell -0.23 >More info -0.54 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
107 lec2-1 12 DAF Seed 0.72 >More info 0.04 >More info WT (WS) 12 DAF Seed developing seeds dissected from sliques Original data
108 bZIP1ko mutant N+Light- -0.22 >More info -0.54 >More info WT-sib N+Light- whole plant Original data GEO bulk
109 Starch sheath 2 days NAA 0.25 >More info 0.51 >More info Starch sheath T0 Stem starch sheath under NAA in vitro treatment before cell divission laser capture microdissection Original data GEO bulk
110 8-DAC chr11-1chr17-1 -0.25 >More info -0.51 >More info 8-DAC Col-0 leaf explants Original data
111 MPK6 ox Shoot Hypoxia 0.18 >More info 0.57 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
112 Salicylic Acid 3 h -0.54 >More info -0.20 >More info Mock 3 h Original data Effect of other inhibitors on seedlings
113 nas4x leaves - Fe 0.20 >More info 0.52 >More info WT leaves - Fe Leaves Original data GEO bulk
114 Shoot -Cs -0.12 >More info -0.56 >More info Control-shoot Original data GEO bulk
115 endosperm ABA -0.51 >More info -0.13 >More info endosperm-control ABA endosperm Original data GEO bulk
116 Red/FR Light45min -0.06 >More info -0.56 >More info FarRed Light 45min Original data Light treatments
117 NJ15 -0.09 >More info -0.53 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
118 aphid infested -0.09 >More info -0.51 >More info control aphid infested Leaves Original data GEO bulk
119 aphid infested -0.09 >More info -0.51 >More info CTR Original data GEO bulk
120 tunicamycin 0.06 >More info 0.51 >More info DMF Original data GEO bulk
121 phyB mutant 16C 4hrs 0.02 >More info -0.56 >More info 16C 4hs whole plant excluding roots Original data GEO bulk
122 Col BTH -0.16 >More info 0.67 >More info Col rosettes Original data GEO bulk
123 CCA1-ox 6am non-polysomal 0.00 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
124 IAA7mII over-expressor IAA Treated -0.19 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
125 gabaculin 0.02 >More info -0.51 >More info WT Col-0 seedling Original data GEO bulk
126 root longitudinal zone-3 pH 4.6 0.06 >More info -0.53 >More info root longitudinal zone-3 pH 5.7 Original data GEO bulk
127 Leafminer damaged seedlings -0.12 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
128 Laer pretreat GA Flg22 1h -0.36 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
129 Col0-PsmES4326-24hpi -0.43 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
130 siliques AtHb1 control -0.42 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk