4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on Atss3 Dark4
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List of experiments correlated with "Atss3 Dark4"  Help Download transcriptome of top 30
Score Experiment Correlation from
Atss3 Dark4		 Correlation to
Atss3 Dark4		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 Atss3 Dark4 1.00 >More info 1.00 >More info Atss3 Dark0.5 Original data GEO bulk
2 Atss3 Dark8 0.91 >More info 0.88 >More info Atss3 Dark0.5 Original data GEO bulk
3 WT 3H Cold -0.63 >More info -0.77 >More info WT control Original data GEO bulk
4 WT 6H Cold -0.57 >More info -0.68 >More info WT control Original data GEO bulk
5 CBF3 0mM NaCl -0.52 >More info -0.71 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
6 M6PR transgenic 0mM NaCl -0.63 >More info -0.58 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
7 Col 8h -0.56 >More info -0.65 >More info Col CA Leaves Original data
8 Col 1d -0.59 >More info -0.59 >More info Col CA Leaves Original data
9 35S:LOB-GR mock 0.60 >More info 0.57 >More info Col mock mock seedling Original data GEO bulk
10 wnk8-2 untreated 0.59 >More info 0.58 >More info Col-0 untreated seedlings Original data GEO bulk
11 Atss3 Light1 0.59 >More info 0.57 >More info Atss3 Dark0.5 Original data GEO bulk
12 SOS1 0mM NaCl -0.64 >More info -0.51 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
13 rosette Light Wounded -0.59 >More info -0.55 >More info rosette Light Control Original data GEO bulk
14 1 h Light Total RNA 0.52 >More info 0.62 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
15 mutant acs6E (single mutant) 0.58 >More info 0.55 >More info col control (single mutant) Original data GEO bulk
16 4C 1h -0.42 >More info -0.68 >More info 4C 0h Original data GEO bulk
17 Leafminer locally damaged thaliana seedlings -0.64 >More info -0.44 >More info Undamaged thaliana seedlings locally damaged by leafminer leaves Original data GEO bulk
18 WT 24H Cold -0.53 >More info -0.55 >More info WT control Original data GEO bulk
19 Leafminer systemically damaged thaliana seedlings -0.58 >More info -0.49 >More info Undamaged thaliana seedlings systemically damaged by leafminer leaves Original data GEO bulk
20 M6PR transgenic leaf 0mM NaCl -0.50 >More info -0.57 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
21 npr1-3 MOCK 48h 0.37 >More info 0.70 >More info Col-0 MOCK 48h Original data GEO bulk
22 Rsch 8h -0.49 >More info -0.58 >More info Rsch CA Leaves Original data
23 1 h Light IP RNA 0.49 >More info 0.57 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
24 16C 10h -0.44 >More info -0.59 >More info L22-10hrs whole plant excluding roots Original data GEO bulk
25 08h Col-0 -0.48 >More info -0.55 >More info 00h Col-0 Original data GEO bulk
26 WT Na2S 0.53 >More info 0.49 >More info WT water Na2S leaf Original data GEO bulk
27 CMV-A2b mutant -0.56 >More info -0.45 >More info Mock-At Aerial tissues Original data GEO bulk
28 leaf13 -0.50 >More info -0.51 >More info unwounded leaves none Original data GEO bulk
29 downy mildew cotyledons early stage 0.50 >More info 0.50 >More info mock inoculated Cotyledons Original data GEO bulk
30 Methyl Jasmonate 1 h -0.43 >More info -0.55 >More info Mock 1 h Original data Basic hormone treatment of seedlings
31 short 10-degree- -0.50 >More info -0.47 >More info control short Original data GEO bulk
32 wnk8-3 untreated 0.51 >More info 0.46 >More info Col-0 untreated seedlings Original data GEO bulk
33 Laer MeJA 1h -0.52 >More info -0.45 >More info Laer Control leaf discs Original data GEO bulk
34 wnk8-1 untreated 0.53 >More info 0.44 >More info Col-0 untreated seedlings Original data GEO bulk
35 Col(gl) leaf 0mM NaCl -0.46 >More info -0.51 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
36 Col(gl) 0mM NaCl -0.46 >More info -0.51 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
37 bHLH122 ox 0.38 >More info 0.59 >More info WT Col-0 bHLH122 overexpression shoot Original data GEO bulk
38 Atss3 Light4 0.50 >More info 0.46 >More info Atss3 Dark0.5 Original data GEO bulk
39 Col 3d -0.45 >More info -0.51 >More info Col CA Leaves Original data
40 tetraploid -0.39 >More info -0.56 >More info diploid Original data GEO bulk
41 35S:LOB-GR DEX 0.54 >More info 0.41 >More info Col DEX dexamethasone seedling Original data GEO bulk
42 3x(p) -0.42 >More info -0.52 >More info 2x two week old seedlings Original data
43 Ws 100mM NaCl -0.51 >More info -0.42 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
44 Ws leaf 100mM NaCl -0.51 >More info -0.42 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
45 Dark 6h ivd -0.57 >More info -0.36 >More info 0h ivd Original data
46 P.syringae vir 4 h (leaf) -0.62 >More info -0.30 >More info Mock 4 h (leaf) Original data Elicitor treatments
47 abi1 hypocotyl -0.40 >More info -0.51 >More info Ler hypocotyl hypocotyl Original data GEO bulk
48 sfr6 drought 0.40 >More info 0.51 >More info WT drought All aerial tissue Original data GEO bulk
49 mutant acs2B (single mutant) 0.50 >More info 0.41 >More info col control (single mutant) Original data GEO bulk
50 coronatine -0.52 >More info -0.38 >More info control rosette leaves Original data
51 Col leaf 100mM NaCl -0.39 >More info -0.51 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
52 Col leaf 100mM NaCl -0.39 >More info -0.51 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
53 lht1 PstDC3000 48h 0.37 >More info 0.53 >More info PstDC3000 48h 48hr leaf Original data GEO bulk
54 Col 100mM NaCl -0.39 >More info -0.51 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
55 4C 2h(SOIL) -0.24 >More info -0.66 >More info 4C 0h(SOIL) Original data GEO bulk
56 current injection -0.32 >More info -0.58 >More info no current injection 4 microampere of electric current for 1 second Original data GEO bulk
57 short 8-degree- -0.51 >More info -0.38 >More info control short Original data GEO bulk
58 Heat and anoxia -0.53 >More info -0.36 >More info Control treatment: 38°c for 90 minutes and thereafter under anoxia for 6h at 23°C in the dark. Original data GEO bulk
59 GRX-overexpression seedlings IAA -0.24 >More info -0.65 >More info WT seedlings IAA Seedlings Original data GEO bulk
60 npr1 sni1 ssn2 SA 0.53 >More info 0.35 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
61 Apex mir-3TCP 14DAS 0.52 >More info 0.36 >More info Apex Col 14DAS Original data GEO bulk
62 Dark 6h wt -0.53 >More info -0.35 >More info 0h wt Original data
63 efr-1 untreated 0.37 >More info 0.51 >More info WT untreated untreated Original data GEO bulk
64 4C 24h(SOIL) -0.36 >More info -0.52 >More info 4C 0h(SOIL) Original data GEO bulk
65 Pst-DC3000(avrRpm1)-4hpi -0.38 >More info -0.50 >More info Pst-DC3000-4hpi Original data GEO bulk
66 DC3000 7h -0.50 >More info -0.37 >More info Mock 7h DC3000 Original data GEO bulk
67 Prohexadione 3 h -0.30 >More info -0.56 >More info Mock 3 h Original data Effect of GA inhibitors on seedlings
68 3x(m) -0.27 >More info -0.59 >More info 2x two week old seedlings Original data
69 mutant-line409 -0.32 >More info -0.53 >More info WT-control whole plant Original data GEO bulk
70 psad1-1 stn7-1 0.50 >More info 0.35 >More info Col-0 rosette leaves Original data GEO bulk
71 opr3 JA 0.5 h -0.14 >More info -0.71 >More info opr3 0 h Original data GEO bulk
72 Nicotinamide-69hr -0.53 >More info -0.31 >More info WT-untreated-69hr nicotinamide aerial tissue Original data GEO bulk
73 Dark 6h hml -0.51 >More info -0.33 >More info 0h hml Original data
74 Methyl Jasmonate 0.5 h -0.27 >More info -0.57 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
75 Shoot -P -0.53 >More info -0.30 >More info Shoot Mock P_starvation 10-day Phosphate starvation Original data GEO bulk
76 hog1-7 0.53 >More info 0.30 >More info wt whole seedling Original data GEO bulk
77 mutant-line774 0.53 >More info 0.30 >More info WT-control whole plant Original data GEO bulk
78 flu dark 8hours/30 minute light -0.30 >More info -0.53 >More info col dark 8hours/30 minute light Original data GEO bulk
79 triploid female excess 0.18 >More info 0.65 >More info tetraploid Original data GEO bulk
80 atmospheric CO2 high Mg shoot -0.56 >More info -0.24 >More info atmospheric CO2 normal Mg shoot Shoot Original data
81 gpa1-4/agb1-2 clean-air 2d -0.50 >More info -0.30 >More info Col clean-air 2d clean-air Original data GEO bulk
82 Protoplast Induced -0.27 >More info -0.53 >More info Uninduced Original data GEO bulk
83 bri1-116 0.07 >More info 0.73 >More info Col seedling Original data GEO bulk
84 CSP1 immonoprecipitated RNA 35S:AtCSP1-FH1 cold -0.30 >More info -0.50 >More info CSP1 immonoprecipitated RNA 35S:AtCSP1-FH1 12h cold (4C) rosettes Original data GEO bulk
85 root callus inducing medium 96 h 0.51 >More info 0.27 >More info root callus inducing medium 0 h 96 hours after incubating on callus inducing medium root explants Original data GEO bulk
86 root callus inducing medium 48 h 0.52 >More info 0.26 >More info root callus inducing medium 0 h 48 hours after incubating on callus inducing medium root explants Original data GEO bulk
87 Dark 0.28 >More info 0.50 >More info Control Original data GEO bulk
88 aba3-1 0.09 >More info 0.69 >More info wt Original data GEO bulk
89 root callus inducing medium 12 h 0.50 >More info 0.27 >More info root callus inducing medium 0 h 12 hours after incubating on callus inducing medium root explants Original data GEO bulk
90 Col leaves 120h LT 0.57 >More info 0.20 >More info Col leaves 0h LT 12h 9-11th adult leaves Original data
91 seed germinating in countinuous light 24h SL 0.10 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
92 Shoot apex inflorescence (after bolting) 0.11 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
93 root callus inducing medium 24h 0.50 >More info 0.25 >More info root callus inducing medium 0 h 24 hours after incubating on callus inducing medium root explants Original data GEO bulk
94 ex1 flu dark 8hours/30 minute light -0.09 >More info -0.66 >More info col dark 8hours/30 minute light Original data GEO bulk
95 non-polysome mRNA eif3k 0.18 >More info 0.54 >More info non-polysome mRNA WT aerial part Original data GEO bulk
96 shoot-10 μM DEX- 24hr -0.19 >More info -0.52 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
97 Col BTH 0.03 >More info 0.67 >More info Col rosettes Original data GEO bulk
98 tga1 tga4 2h KCl -0.09 >More info -0.57 >More info Col 0 2h KCl 5 mM KCl root Original data GEO bulk
99 rdr6-15 0.08 >More info 0.56 >More info Col-0 plant inflorescence Original data
100 Brassinolide 1 h (det2) -0.08 >More info -0.52 >More info Mock 1 h (det2) Original data Basic hormone treatment of seedlings
101 CCA1-ox 6am non-polysomal 0.09 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
102 RRE2 0.05 >More info 0.54 >More info Col C Original data GEO bulk
103 35S:VND7-VP16-GR+CHX -0.08 >More info -0.50 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
104 M6PR transgenic 100mM NaCl -0.55 >More info -0.01 >More info Ws 100mM NaCl 100mM NaCl leaf Original data GEO bulk
105 AFB1 0h 0.04 >More info 0.52 >More info Col 0h Leaf Original data GEO bulk
106 irradiated leaf (WT 5d) -0.50 >More info -0.04 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
107 35S::CBF2 -0.01 >More info -0.53 >More info Ws2 Original data GEO bulk
108 IAA7mII over-expressor IAA Treated -0.17 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
109 0h ivd -0.05 >More info 0.54 >More info 0h wt Original data
110 Laer pretreat GA Flg22 1h -0.22 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
111 2hr continuous KNO3 PeR cell 0.08 >More info -0.57 >More info 2hr KCl control PeR cell Pericycle root cells Original data GEO bulk
112 treated group -0.05 >More info 0.53 >More info Control group Original data
113 siliques AtHb1 control -0.10 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
114 B.cinerea 18 h infection -0.14 >More info 0.50 >More info Mock 18 h Original data Botrytis cinerea infection
115 Botrytis cinerea 18h -0.14 >More info 0.50 >More info control 18h Original data GEO bulk
116 Elevated CO2 AMPLE N NIGHT -0.14 >More info 0.50 >More info Ambient CO2 AMPLE N NIGHT Youngest Most Fully Expanded Leaf Original data
117 Col0-PsmES4326-24hpi -0.32 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
118 Heat shock optimum -0.45 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
119 Leafminer damaged seedlings -0.64 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk