4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on phyB mutant 16C 4hrs
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List of experiments correlated with "phyB mutant 16C 4hrs"  Help Download transcriptome of top 30
Score Experiment Correlation from
phyB mutant 16C 4hrs		 Correlation to
phyB mutant 16C 4hrs		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 phyB mutant 16C 4hrs 1.00 >More info 1.00 >More info 16C 4hs whole plant excluding roots Original data GEO bulk
2 16C 4hs -0.59 >More info -0.72 >More info L22-4hrs whole plant excluding roots Original data GEO bulk
3 M6PR transgenic leaf 0mM NaCl 0.43 >More info 0.82 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
4 P.syringae vir 4 h (leaf) 0.46 >More info 0.75 >More info Mock 4 h (leaf) Original data Elicitor treatments
5 1 h Light IP RNA -0.47 >More info -0.74 >More info 1h Dark IP RNA 1 h light control whole seedlings Original data GEO bulk
6 tt4 0.49 >More info 0.72 >More info Col-0 aerial part Original data
7 OsRLCK253 expressing -0.48 >More info -0.69 >More info WT seedlings Original data GEO bulk
8 MYB12OX/tt4 0.49 >More info 0.68 >More info Col-0 aerial part Original data
9 oas-a1.1 root -0.55 >More info -0.61 >More info WT-Untreated Root Original data GEO bulk
10 Col leaf 100mM NaCl 0.44 >More info 0.68 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
11 Col leaf 100mM NaCl 0.44 >More info 0.68 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
12 Col 100mM NaCl 0.44 >More info 0.68 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
13 Col(gl) leaf 0mM NaCl 0.31 >More info 0.80 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
14 Col(gl) 0mM NaCl 0.31 >More info 0.80 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
15 gai Flg22 2h 0.63 >More info 0.48 >More info Laer Flg22 2h leaf discs Original data GEO bulk
16 6h volatiles Sm. R3089 0.32 >More info 0.78 >More info 6h untreated whole seedling Original data GEO bulk
17 pip3 At2g19270 TDNA 9 0.52 >More info 0.56 >More info Col-0 whole plant Original data GEO bulk
18 shoot-10 μM DEX- 12 hr 0.66 >More info 0.41 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
19 Ws leaf 100mM NaCl 0.46 >More info 0.61 >More info Ws leaf 0mM NaCl leaf Original data GEO bulk
20 Ws 100mM NaCl 0.46 >More info 0.61 >More info Ws 0mM NaCl 100mM NaCl leaf Original data GEO bulk
21 pap1-D/tt4 0.38 >More info 0.67 >More info Col-0 aerial part Original data
22 oligomycin 1 h 0.69 >More info 0.36 >More info mock 1 h 1 h_oligo seedling culture Original data GEO bulk
23 Shoot dark control 7h 0.28 >More info 0.74 >More info Shoot light control 7 h non-submerged dark condition whole shoot Original data GEO bulk
24 shoot-10 μM DEX- 6 hr 0.48 >More info 0.54 >More info shoot-10 μM DEX- 0 hr SHR induction by DEX whole shoot Original data
25 Day Time Treatment -0.38 >More info -0.63 >More info Day Time Control 1hr white light pulse aerial rosette Original data
26 OH1 0.58 >More info 0.41 >More info Col-0 leaves Original data GEO bulk
27 mil4 0.36 >More info 0.63 >More info Col rosettes Original data GEO bulk
28 Dex-rga(delta17) 4h GA4 -0.50 >More info -0.48 >More info Vector 4h GA4 shoots Original data GEO bulk
29 control leaf (cmt 5d) -0.61 >More info -0.37 >More info control leaf (WT 5d) rosette leaf only Original data GEO bulk
30 Atss3 Light1 -0.34 >More info -0.63 >More info Atss3 Dark0.5 Original data GEO bulk
31 Shoot dark control 24h 0.28 >More info 0.69 >More info Shoot light control 24 h non-submerged dark condition whole shoot Original data GEO bulk
32 treated group 0.57 >More info 0.39 >More info Control group Original data
33 1 h Light Total RNA -0.23 >More info -0.73 >More info 1h Dark Total RNA 1 h light control whole seedlings Original data GEO bulk
34 Col BTH 0.29 >More info 0.67 >More info Col rosettes Original data GEO bulk
35 toc1-1-77hr 0.26 >More info 0.68 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
36 afb3-1 2h KNO3 -0.39 >More info -0.55 >More info Ws 2h KNO3 2 hours of 5 mM KNO3 Arabidopsis root Original data GEO bulk
37 Night Time Treatment -0.28 >More info -0.65 >More info Night Time Control 1hr white light pulse aerial rosette Original data
38 OsSAP11 expressing -0.34 >More info -0.59 >More info WT seedlings Original data GEO bulk
39 Heat shock optimum 0.27 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
40 WOX1-1 0.27 >More info 0.65 >More info Col-0 aerial part Original data
41 toc1-1-73hr 0.57 >More info 0.33 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
42 Atss3 Light4 -0.18 >More info -0.72 >More info Atss3 Dark0.5 Original data GEO bulk
43 Col-0 C2H4 24h 0.33 >More info 0.54 >More info Col-0 air 4 hour ethylene gas (10 ppm) Original data GEO bulk
44 Cd 18h root -0.30 >More info -0.56 >More info WT-Untreated Root Original data GEO bulk
45 hai1-2 -0.53 >More info -0.32 >More info control control whole seedlings Original data GEO bulk
46 root longitudinal zone-2 pH 4.6 0.54 >More info 0.30 >More info root longitudinal zone-2 pH 5.7 Original data GEO bulk
47 seedling 1.5h after HZE WT 0.31 >More info 0.53 >More info seedling day 1 unirradiated WT 1.5h Original data
48 4C 2h(SOIL) 0.59 >More info 0.25 >More info 4C 0h(SOIL) Original data GEO bulk
49 WT 3H Cold 0.52 >More info 0.31 >More info WT control Original data GEO bulk
50 M6PR transgenic 0mM NaCl 0.14 >More info 0.69 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
51 roottip hypoxia pSHR 0.50 >More info 0.32 >More info roottip hypoxia total hypoxia roottip Original data GEO bulk
52 WT (Col-0) inflorescence drought day 3 -0.52 >More info -0.29 >More info WT (Col-0) inflorescence well-watered day 3 Unopen flower buds Original data GEO bulk
53 Nicotinamide-49hr 0.29 >More info 0.52 >More info WT-untreated-49hr nicotinamide aerial tissue Original data GEO bulk
54 FLIGHT TAGESB plate6 SHOOTS 0.28 >More info 0.53 >More info GROUND CONTROL TAGESB plate6 SHOOTS plant tissue Original data
55 IAA7mII over-expressor IAA Treated 0.12 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
56 Shoot submergence 24h 0.15 >More info 0.65 >More info Shoot light control 24 h submergence in darkness whole shoot Original data GEO bulk
57 Pseudomonas 0.04 >More info 0.76 >More info Control pseudomonas treated whole seedling Original data GEO bulk
58 cat2-short-day 2d 0.58 >More info 0.22 >More info Col0-SD2 transferred to air (400 ppm) for 2 days in short day regime (8h light/16h dark) rosette leaf material Original data GEO bulk
59 12h volatiles Sm. R3089 0.11 >More info 0.68 >More info 12h untreated whole seedling Original data GEO bulk
60 ape2 low light 0.25 >More info 0.54 >More info Ws-2 low light Original data GEO bulk
61 Inflorescence ngaquad -0.56 >More info -0.22 >More info Inflorescence wt Original data GEO bulk
62 mil4 sid2 0.10 >More info 0.68 >More info Col rosettes Original data GEO bulk
63 shl-2 Pool 0.10 >More info 0.68 >More info Ler Pool seedling Original data GEO bulk
64 seedling 1.5h after HZE atm-1 0.23 >More info 0.55 >More info seedling day 1 unirradiated atm-1 1.5h Original data
65 kyp protoplast -0.57 >More info -0.21 >More info Ler protoplast protoplast Original data GEO bulk
66 ago4-1 -0.54 >More info -0.22 >More info WT La-er whole plants Original data GEO bulk
67 Octopus overexpressor 35SDYG25 0.51 >More info 0.25 >More info WS Original data GEO bulk
68 Col-0 DCA 6d 0.17 >More info 0.59 >More info Col-0 MOCK 6d Original data GEO bulk
69 GR-REV 30min 0.56 >More info 0.19 >More info Col 30min Original data GEO bulk
70 WT cold 0.18 >More info 0.57 >More info WT warm 3 week cold entire aerial part Original data GEO bulk
71 pmr5 pmr6 0.21 >More info 0.54 >More info Col-0 Original data GEO bulk
72 GO5; 8h switch to ambient CO2 concentrations; 0.51 >More info 0.23 >More info WT; 8h switch to ambient CO2 concentrations; 2 whole rosettes Original data
73 leaf blade in D 0.12 >More info 0.62 >More info leaf blade in WL leaf blades Original data GEO bulk
74 pap1-D 0.21 >More info 0.52 >More info Col-0 aerial part Original data
75 3x(m) -0.01 >More info 0.74 >More info 2x two week old seedlings Original data
76 roottip control pSCR 0.55 >More info 0.17 >More info roottip control total control roottip Original data GEO bulk
77 ptpks2 -0.18 >More info -0.54 >More info Col-WT leaves Original data GEO bulk
78 sex1-3 -0.00 >More info 0.72 >More info Col-WT leaves Original data GEO bulk
79 atmyc2 Seedling Dark -0.55 >More info -0.16 >More info WT Seedling Dark Original data GEO bulk
80 Cs root -0.17 >More info -0.54 >More info control root Original data GEO bulk
81 4C 7d(SOIL) 0.61 >More info 0.10 >More info 4C 0h(SOIL) Original data GEO bulk
82 cca1-lhy before light 0.51 >More info 0.20 >More info before light whole seedlings Original data GEO bulk
83 camta3-1 0.11 >More info 0.59 >More info WT Original data GEO bulk
84 swn-7 0.08 >More info 0.62 >More info Col whole plant Original data GEO bulk
85 AmGSTF1 expressor 0.14 >More info 0.55 >More info WT leaf tissue Original data GEO bulk
86 MIL4 ox 0.14 >More info 0.55 >More info Col Original data GEO bulk
87 shoot hypoxia pKAT1 0.56 >More info 0.12 >More info shoot hypoxia total Original data GEO bulk
88 rts1-5 0.04 >More info 0.64 >More info null-mutant whole plant Original data GEO bulk
89 Dry pre-dawn -0.13 >More info -0.54 >More info Wet pre-dawn water-limited whole rosette Original data GEO bulk
90 4h decapitation -0.07 >More info -0.60 >More info axillary-buds-before-decapitation axillary shoots Original data GEO bulk
91 Cd 24h root -0.09 >More info -0.58 >More info WT-Untreated Shoot Original data GEO bulk
92 toc1-1-49hr 0.50 >More info 0.16 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
93 sid2 0.05 >More info 0.61 >More info Col rosettes Original data GEO bulk
94 seedling 12h after HZE atm-1 0.11 >More info 0.55 >More info seedling day 1 unirradiated atm-1 12h Original data
95 gai MeJA 1h 0.56 >More info 0.09 >More info Laer MeJA 1h leaf discs Original data GEO bulk
96 petiole in D 0.09 >More info 0.56 >More info petiole in WL petioles Original data GEO bulk
97 WT 3h -P 0.10 >More info 0.55 >More info WT 3h +P No phosphate medium seedlings without roots Original data GEO bulk
98 Col0-PsmES4326-24hpi 0.04 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
99 WT Seedling BL+ABA 0.51 >More info 0.13 >More info WT Seedling BL Original data GEO bulk
100 toc1-1-69hr 0.50 >More info 0.14 >More info WT-untreated-69hr none seedlings aerial tissue Original data GEO bulk
101 Shoot apex inflorescence (after bolting) -0.01 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
102 Laer Flg22(Agrobacterium) 2h 0.02 >More info 0.62 >More info Laer Control leaf discs Original data GEO bulk
103 siliques AtHb1 control 0.12 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
104 root control pSultr2:2 0.50 >More info 0.13 >More info root control total control root Original data GEO bulk
105 SOS1 0mM NaCl -0.01 >More info 0.64 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
106 D2O 0.06 >More info 0.56 >More info H2O seedling Original data GEO bulk
107 mkk1/mkk2 24h BTH rep 0.08 >More info 0.54 >More info Col-0 24h BTH rep Original data GEO bulk
108 sfr3 cold 0.10 >More info 0.52 >More info WT cold All aerial tissue Original data GEO bulk
109 +1.6 mM Tween 20 1 h. -0.06 >More info 0.67 >More info +distilled water 1 h. Original data GEO bulk
110 lug3 flowers 0.50 >More info 0.11 >More info WT-flowers flowers Original data GEO bulk
111 Light 3day ivd -0.08 >More info -0.53 >More info 0h ivd Original data
112 mkk1/mkk2 control rep 0.06 >More info 0.54 >More info Col-0 Time 0 rep Original data GEO bulk
113 24h SL WT -0.51 >More info -0.09 >More info 0 h WT seed Original data
114 INA -0.02 >More info 0.62 >More info CK INA seedling Original data
115 ga1-3 1h GA4 -0.51 >More info -0.08 >More info ga1-3 1h water shoots Original data GEO bulk
116 Mutant lwd1_lwd2 -0.14 >More info 0.73 >More info Wildtype for phy mutants Original data GEO bulk
117 LWD1 and LWD2 in photoperiod regulation (lwd1lwd2
)		 -0.14 >More info 0.73 >More info LWD1 and LWD2 in photoperiod regulation (wt ) Original data GEO bulk
118 npr1-3 DCA 48h -0.04 >More info 0.63 >More info npr1-3 MOCK 48h Original data GEO bulk
119 Col(gl) leaf 100mM NaCl 0.08 >More info 0.51 >More info Col leaf 100mM NaCl leaf Original data GEO bulk
120 toc1-1-53hr 0.09 >More info 0.50 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
121 Col(gl) 100mM NaCl 0.08 >More info 0.51 >More info Col 100mM NaCl 100mM NaCl leaf Original data GEO bulk
122 leaf blade in FRD 0.08 >More info 0.50 >More info leaf blade in WL leaf blades Original data GEO bulk
123 E.orontii Infection 3 day 0.03 >More info 0.54 >More info Uninfection 3 day Original data Elicitor treatments
124 bio4-1 mutant leaves 0.04 >More info 0.52 >More info WT leaves leaves Original data GEO bulk
125 seed germinating in countinuous light 24h SL -0.11 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
126 OE-HRA1 2HS  -0.54 >More info -0.00 >More info Col-0 2HS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
127 abi3-6 16 DAF Seed -0.56 >More info 0.02 >More info WT (Col-0) 16 DAF Seed developing seeds dissected from sliques Original data
128 low CO2 + dark 0.00 >More info 0.54 >More info normal CO2 + light Original data GEO bulk
129 E.orontii Infection 6 h -0.04 >More info 0.58 >More info Uninfection 6 h Original data Elicitor treatments
130 cpr5npr1 -0.07 >More info 0.58 >More info WT(COL) Original data GEO bulk
131 sfr6 drought 0.04 >More info -0.55 >More info WT drought All aerial tissue Original data GEO bulk
132 Leafminer damaged seedlings -0.07 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
133 12m.KCl -0.54 >More info 0.06 >More info To. KCl 14 day old Roots Original data GEO bulk
134 CCA1-ox 6am non-polysomal -0.03 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
135 04h Col-0 0.09 >More info -0.56 >More info 00h Col-0 Original data GEO bulk
136 sng1 0.51 >More info -0.04 >More info WT aerial region Original data GEO bulk
137 CBF3 0mM NaCl -0.03 >More info 0.50 >More info Ws 0mM NaCl 0mM NaCl leaf Original data GEO bulk
138 Naphthyl- phthalamic acid 3 h 0.50 >More info -0.04 >More info Mock 3 h Original data Effect of auxin inhibitors on seedlings
139 low CO2 + light -0.08 >More info 0.54 >More info normal CO2 + light Original data GEO bulk
140 Laer pretreat GA Flg22 1h -0.25 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
141 CCA14 dark late 0.07 >More info -0.52 >More info Col dark late Original data GEO bulk
142 bri1-116 -0.29 >More info 0.73 >More info Col seedling Original data GEO bulk
143 atm3 0.12 >More info -0.54 >More info Col0 whole plant Original data GEO bulk
144 ANAC102 over-expressor -0.50 >More info 0.08 >More info C24 Original data GEO bulk
145 60m light 0.13 >More info -0.52 >More info before light whole seedlings Original data GEO bulk
146 bam7 untreated -0.13 >More info 0.51 >More info WT untreated none shoot Original data
147 gid1a gid1b-1 gid1c-2 1 hr 100 uM GA3 0.50 >More info -0.14 >More info ga-1 1 hr 100 uM GA3 Original data GEO bulk
148 3x(p) -0.25 >More info 0.61 >More info 2x two week old seedlings Original data
149 gabaculin -0.50 >More info 0.25 >More info WT Col-0 seedling Original data GEO bulk