4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on cca1-lhy 60m light
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "cca1-lhy 60m light"  Help Download transcriptome of top 30
Score Experiment Correlation from
cca1-lhy 60m light		 Correlation to
cca1-lhy 60m light		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 cca1-lhy 60m light 1.00 >More info 1.00 >More info 60m light whole seedlings Original data GEO bulk
2 cca1-lhy 30m light 0.89 >More info 0.92 >More info 30m light whole seedlings Original data GEO bulk
3 cca1-lhy 15m light 0.81 >More info 0.86 >More info 15m light whole seedlings Original data GEO bulk
4 cca1-lhy before light 0.75 >More info 0.86 >More info before light whole seedlings Original data GEO bulk
5 seedling 6h after HZE atm-1 0.65 >More info 0.63 >More info seedling day 1 unirradiated atm-1 6h Original data
6 atmyc2 Seedling BL 0.47 >More info 0.77 >More info WT Seedling BL Original data GEO bulk
7 WT Na2S -0.64 >More info -0.58 >More info WT water Na2S leaf Original data GEO bulk
8 08h Col-0 0.64 >More info 0.58 >More info 00h Col-0 Original data GEO bulk
9 pip3 At2g19270 RNAi 24 -0.62 >More info -0.57 >More info Nd-1 whole plant Original data GEO bulk
10 ein2-1 24hpi A. brassicicola -0.63 >More info -0.55 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
11 20h Col-0 0.61 >More info 0.53 >More info 00h Col-0 Original data GEO bulk
12 60m light -0.57 >More info -0.57 >More info before light whole seedlings Original data GEO bulk
13 dde2-2 24hpi A. brassicicola -0.62 >More info -0.51 >More info Col-0 9 hpi A. brassicicola 3rd-5th true leaves Original data
14 toc1-1-73hr 0.63 >More info 0.49 >More info WT-untreated-73hr none seedlings aerial tissue Original data GEO bulk
15 root - 08% oxygen - 2h -0.46 >More info -0.65 >More info root - 21% oxygen - 2h Original data GEO bulk
16 Heat shock optimum 0.45 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
17 toc1-1-77hr 0.62 >More info 0.47 >More info WT-untreated-77hr none seedlings aerial tissue Original data GEO bulk
18 seedling 6h after Gamma atm-1 0.51 >More info 0.56 >More info seedling day 1 unirradiated atm-1 6h Original data
19 seedling 12h after Gamma atm-1 0.59 >More info 0.46 >More info seedling day 1 unirradiated atm-1 12h Original data
20 Laer pretreat GA Flg22 1h 0.34 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
21 pip3 At2g19270 RNAi 32 -0.58 >More info -0.47 >More info Nd-1 whole plant Original data GEO bulk
22 Dark 6h wt 0.66 >More info 0.37 >More info 0h wt Original data
23 tmm1-inflorescence-tips -0.44 >More info -0.59 >More info Col gl1-inflorescence-tips inflorescence tip Original data GEO bulk
24 Cd 18h root -0.56 >More info -0.45 >More info WT-Untreated Root Original data GEO bulk
25 Laer Flg22(Agrobacterium) 2h 0.48 >More info 0.53 >More info Laer Control leaf discs Original data GEO bulk
26 Leafminer damaged seedlings 0.45 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
27 Dark 6h hml 0.65 >More info 0.35 >More info 0h hml Original data
28 Dark 6h ivd 0.62 >More info 0.38 >More info 0h ivd Original data
29 seedling 12h after Gamma WT 0.57 >More info 0.42 >More info seedling day 1 unirradiated WT 12h Original data
30 phyABDE Dark -0.43 >More info -0.56 >More info WT Dark Dark whole seedling Original data GEO bulk
31 WT cold 12 h 0.54 >More info 0.42 >More info WT cold 0h GSM955987 seedlings Original data GEO bulk
32 rdr1-1 -0.60 >More info -0.35 >More info Col-0 Original data GEO bulk
33 seedling 1.5h after HZE atm-1 0.52 >More info 0.41 >More info seedling day 1 unirradiated atm-1 1.5h Original data
34 des1 water -0.61 >More info -0.32 >More info WT water water leaf Original data GEO bulk
35 Col-0 DCA 6d 0.61 >More info 0.31 >More info Col-0 MOCK 6d Original data GEO bulk
36 seedling 12h after HZE atm-1 0.52 >More info 0.39 >More info seedling day 1 unirradiated atm-1 12h Original data
37 toc1-1-53hr 0.54 >More info 0.37 >More info WT-untreated-53hr none seedlings aerial tissue Original data GEO bulk
38 seedling 6h after HZE WT 0.70 >More info 0.20 >More info seedling day 1 unirradiated WT 6h Original data
39 OsRLCK253 expressing -0.61 >More info -0.29 >More info WT seedlings Original data GEO bulk
40 dsr1 0.33 >More info 0.56 >More info WT mock Whole seedling Original data GEO bulk
41 Col BTH 0.22 >More info 0.67 >More info Col rosettes Original data GEO bulk
42 Dark 1day ivd 0.60 >More info 0.28 >More info 0h ivd Original data
43 IAA/inhibitor A Treated -0.51 >More info -0.37 >More info IAA Treated Original data GEO bulk
44 cdkf:1-2 -0.60 >More info -0.28 >More info wt seedling young seedlings Original data GEO bulk
45 phyABCDE Dark -0.26 >More info -0.62 >More info WT Dark Dark whole seedling Original data GEO bulk
46 Laer pretreat GA Flg22 2h 0.52 >More info 0.34 >More info Laer pretreat water control leaf discs Original data GEO bulk
47 Dark 1day wt 0.60 >More info 0.26 >More info 0h wt Original data
48 04h Col-0 0.51 >More info 0.34 >More info 00h Col-0 Original data GEO bulk
49 essp3/brm5 mutant -0.54 >More info -0.28 >More info WT (Pro-beta-CG;GUS) Original data GEO bulk
50 long 14-degree- -0.26 >More info -0.56 >More info control long Original data GEO bulk
51 mil4 0.54 >More info 0.27 >More info Col rosettes Original data GEO bulk
52 30m light -0.31 >More info -0.50 >More info before light whole seedlings Original data GEO bulk
53 Ws-2 high light -0.29 >More info -0.52 >More info Ws-2 low light Original data GEO bulk
54 M6PR transgenic leaf 0mM NaCl 0.55 >More info 0.25 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
55 Dark 2day hml 0.59 >More info 0.21 >More info 0h hml Original data
56 npr1 sni1 ssn2 SA 0.51 >More info 0.28 >More info npr1 sni1 SA salicylic acid seedling Original data GEO bulk
57 Dark 2day wt 0.60 >More info 0.19 >More info 0h wt Original data
58 SAM SE agl15 agl18 double mutant -0.24 >More info -0.55 >More info SAM SE Col Original data GEO bulk
59 ABA control -0.09 >More info -0.70 >More info No ABA control Original data GEO bulk
60 Dark 1day hml 0.54 >More info 0.24 >More info 0h hml Original data
61 Col(gl) 0mM NaCl 0.52 >More info 0.26 >More info Col 0mM NaCl 0mM NaCl leaf Original data GEO bulk
62 anti-sense for AtAOX1a 0.55 >More info 0.23 >More info WT Original data GEO bulk
63 Col(gl) leaf 0mM NaCl 0.52 >More info 0.26 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
64 Dark 3day ivd 0.60 >More info 0.17 >More info 0h ivd Original data
65 8 hr ammonium 0.52 >More info 0.25 >More info immediately prior to nitrogen addtion roots from hydroponically grown plants Original data GEO bulk
66 Col0-PsmES4326-24hpi 0.16 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
67 wrky72-1-NOCO2 INFECTED 0.52 >More info 0.24 >More info WT-NOCO2 INFECTED Original data GEO bulk
68 seedling 6h after Gamma WT 0.50 >More info 0.26 >More info seedling day 1 unirradiated WT 6h Original data
69 Dark 3day wt 0.60 >More info 0.16 >More info 0h wt Original data
70 12h Col-0 0.50 >More info 0.26 >More info 00h Col-0 Original data GEO bulk
71 Col whole leaf 6hpi -0.22 >More info -0.54 >More info Col whole leaf 0h UI whole leaf Original data GEO bulk
72 OH1 0.55 >More info 0.19 >More info Col-0 leaves Original data GEO bulk
73 rrd2 IBA -0.24 >More info -0.50 >More info wild type IBA 12h 0.5 mg/L IBA cultured explant Original data GEO bulk
74 Dark 3day hml 0.59 >More info 0.14 >More info 0h hml Original data
75 xyl-grown cell culture- 1h 1mM Suc -0.14 >More info -0.59 >More info xyl-grown cell culture- 1h 1mM Xyl cell culture Original data
76 C24-30min IAA 0.54 >More info 0.18 >More info C24-0h IAA whole plant Original data GEO bulk
77 toc1-1-49hr 0.55 >More info 0.15 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
78 Cs root -0.14 >More info -0.56 >More info control root Original data GEO bulk
79 bri1-116 -0.03 >More info 0.73 >More info Col seedling Original data GEO bulk
80 siliques AtHb1 control 0.16 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
81 gpa1-4/agb1-2 ozone 2d 0.15 >More info 0.53 >More info Col ozone 2d ozone Original data GEO bulk
82 Inflorescences Trp1 0.50 >More info 0.16 >More info Inflorescences ler inflorescences Original data GEO bulk
83 toc1-1-93hr 0.15 >More info 0.50 >More info WT-untreated-93hr none seedlings aerial tissue Original data GEO bulk
84 Ler KAR1 24h seed -0.12 >More info -0.53 >More info Ler WATER 24h seed KAR1 seed Original data GEO bulk
85 sfr3 cold -0.52 >More info -0.12 >More info WT-cold aerial tissues Original data GEO bulk
86 rsa1 salt 12 h -0.12 >More info -0.52 >More info WT salt 12 h Salt with 120 mM NaCl for 24 h seedlings Original data GEO bulk
87 dor control -0.57 >More info -0.07 >More info WT control Original data GEO bulk
88 Col leaf 100mM NaCl 0.55 >More info 0.08 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
89 Col leaf 100mM NaCl 0.55 >More info 0.08 >More info Col leaf 0mM NaCl leaf Original data GEO bulk
90 Col 100mM NaCl 0.55 >More info 0.08 >More info Col 0mM NaCl 100mM NaCl leaf Original data GEO bulk
91 IAA7mII over-expressor IAA Treated -0.07 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
92 spx1 spx2 complete 0.50 >More info 0.11 >More info WT complete seedlings Original data
93 Shoot apex inflorescence (after bolting) -0.04 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
94 hsfa2 KO 0.56 >More info 0.03 >More info WT (Col-0) whole seedling Original data GEO bulk
95 Mutant ap1-15(flower) 0.50 >More info 0.09 >More info Flowers stage12 Original data Developmental series; organs / tissues at different ages
96 pab polysome 0.02 >More info -0.61 >More info WT polysome seedling shoot/aerial seedling Original data
97 seedling 3h after HZE WT 0.54 >More info 0.02 >More info seedling day 1 unirradiated WT 3h Original data
98 seed germinating in countinuous light 24h SL -0.11 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
99 hsfa2 KO heat shock 0.53 >More info 0.02 >More info WT (Col-0) heat shock whole seedling Original data GEO bulk
100 Dark 2day ivd 0.56 >More info -0.01 >More info 0h ivd Original data
101 Blue Light 4 h -0.02 >More info -0.53 >More info White Light 4 h Original data Light treatments
102 clf-28 swn-7 -0.04 >More info -0.51 >More info Col whole plant Original data GEO bulk
103 ahg1-1 0.09 >More info -0.52 >More info ABA control Original data GEO bulk
104 BI-1-3h IAA 0.51 >More info -0.08 >More info BI-1-0h IAA whole plant Original data GEO bulk
105 CCA1-ox 6am non-polysomal -0.09 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
106 HARAP aerobic -0.50 >More info 0.09 >More info WT aerobic aerobic Original data GEO bulk
107 MYB51 OE 0.53 >More info -0.13 >More info WT for ATR1/MYB51 Original data GEO bulk
108 piffq 2d WL 0.18 >More info -0.56 >More info WT 2d WL whole seedling Original data GEO bulk
109 frb1 mutant 0.54 >More info -0.16 >More info WT whole seedling Original data GEO bulk
110 pab nonpolysome 0.13 >More info -0.50 >More info WT nonpolysome seedling shoot/aerial seedling Original data
111 A2hsfa1-ox in quadruple mutant 0.51 >More info -0.19 >More info hsfa1 quadruple mutant whole seedling Original data GEO bulk
112 WT 3H Cold 0.50 >More info -0.24 >More info WT control Original data GEO bulk