4.0:Analysis result - correlation network
Home    Method    Manual    History   
Module-based correlation network(MCN) centered on ckh2 CK0
  Help> How to read results

>>Show Interactive view (test)
List of experiments correlated with "ckh2 CK0"  Help Download transcriptome of top 30
Score Experiment Correlation from
ckh2 CK0		 Correlation to
ckh2 CK0		 Control Experiment Genotype Treatment Tissue Link to
original data		 Experimental
Category		 Data set
Details
1 ckh2 CK0 1.00 >More info 1.00 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D in the absence of kinetin. tissue culture Original data GEO bulk
2 ckh2 CK25 0.94 >More info 0.91 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
3 ckh2 CK200 0.90 >More info 0.80 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
4 ckh1 CK0 0.80 >More info 0.79 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D in the absence of kinetin. tissue culture Original data GEO bulk
5 ckh1 CK25 0.79 >More info 0.61 >More info WT (Ler) CK25 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
6 WT (Ler) TSA 0.68 >More info 0.52 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and 100 ng/ml TSA. tissue culture Original data GEO bulk
7 ckh1 CK200 0.72 >More info 0.44 >More info WT (Ler) CK200 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and high level (200 ng/ml) of kinetin. tissue culture Original data GEO bulk
8 WT (Ler) CK25 0.52 >More info 0.61 >More info WT (Ler) CK0 cultured for 3 days on CIM containing 100 ng/ml 2 4-D and low level (25 ng/ml) of kinetin. tissue culture Original data GEO bulk
9 atmyc2 cop1 Seedling Dark 0.61 >More info 0.48 >More info WT Seedling Dark Original data GEO bulk
10 bri1-116 0.36 >More info 0.73 >More info Col seedling Original data GEO bulk
11 WT Root Hypoxia 0.36 >More info 0.73 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
12 Cs shoot -0.23 >More info -0.84 >More info control shoot Original data GEO bulk
13 Stem tissue 2 days NAA 0.38 >More info 0.67 >More info Stem tissue T0 Stem tissue with NAA treatment Stem tissue with NAA treatment Original data GEO bulk
14 root - 01% oxygen - 2h 0.28 >More info 0.73 >More info root - 21% oxygen - 2h Original data GEO bulk
15 seedlings + TSA 0.57 >More info 0.42 >More info control seedlings 10-day old whole seedling Original data GEO bulk
16 35S:ORE1-protoplast 6h -0.43 >More info -0.54 >More info WT none mesophyll cell protoplasts Original data GEO bulk
17 IAA 0.5 h 0.35 >More info 0.60 >More info Mock 0.5 h Original data Basic hormone treatment of seedlings
18 P.p 2.5hai 0.37 >More info 0.58 >More info At-Control roots Original data GEO bulk
19 csn4-1 mutant 0.59 >More info 0.34 >More info WT dark Original data GEO bulk
20 Col-0 Root 100 mM ATP 30 min 0.53 >More info 0.39 >More info Col-0 Root MES buffer 30 min Roots of 5 day-old seedlings Original data
21 P.p 6hai 0.51 >More info 0.40 >More info At-Control roots Original data GEO bulk
22 MPK6 ox Root Hypoxia 0.36 >More info 0.55 >More info WT Root Normoxia (mock) Hypoxia Root Original data GEO bulk
23 root - 01% oxygen - 48h 0.30 >More info 0.61 >More info root - 21% oxygen - 48h Original data GEO bulk
24 cop1 Seedling Dark 0.50 >More info 0.40 >More info WT Seedling Dark Original data GEO bulk
25 (Col-0)+200 uM As 0.36 >More info 0.53 >More info (Col-0)+0 uM As treated with 200 uM As Roots Original data GEO bulk
26 toc1-1-49hr 0.54 >More info 0.34 >More info WT-untreated-49hr none seedlings aerial tissue Original data GEO bulk
27 csn5 (csn5a-2 csn5b) dark 0.55 >More info 0.32 >More info WT dark Original data GEO bulk
28 Heat shock optimum 0.21 >More info 0.65 >More info Heat shock baseline Photosynthesis at optimum temperature leaf first fully expanded Original data GEO bulk
29 Col BTH 0.18 >More info 0.67 >More info Col rosettes Original data GEO bulk
30 AtGATA2ox 0.50 >More info 0.34 >More info Col seedling Original data GEO bulk
31 root - 04% oxygen - 30min 0.26 >More info 0.58 >More info root - 21% oxygen - 30min Original data GEO bulk
32 TAMM27 roots 2hr KNO3 nitrogen 0.51 >More info 0.32 >More info Col0 roots 2hr KNO3 nitrogen root Original data GEO bulk
33 Shoot apex inflorescence (after bolting) 0.18 >More info 0.65 >More info Control for tissue data Original data Developmental series; organs / tissues at different ages
34 siliques AtHb1 control 0.31 >More info 0.52 >More info siliques WT control control silique Original data GEO bulk
35 Ws HS 0.31 >More info 0.52 >More info Ws control heat shocked seedling Original data GEO bulk
36 root - 04% oxygen - 48h 0.22 >More info 0.61 >More info root - 21% oxygen - 48h Original data GEO bulk
37 glk1 glk2 GLK1-GR +DEX 4h 0.23 >More info 0.60 >More info glk1 glk2 GLK1-GR mock 4h dexamethasone whole seedlings Original data GEO bulk
38 seed germinating in countinuous light 24h SL 0.15 >More info 0.67 >More info Control for tissue data seed Original data GEO bulk
39 phr1 Shoot-Pi 0.51 >More info 0.30 >More info WT Root-Pi shoots Original data GEO bulk
40 E2Fa-Dpa 0.56 >More info 0.25 >More info WT Original data GEO bulk
41 (Col-0)+100 uM As 0.29 >More info 0.51 >More info (Col-0)+0 uM As treated with 100 uM As Roots Original data GEO bulk
42 aln-1 -0.63 >More info -0.14 >More info Col-0 Aerial part of seedlings Original data
43 sdg2 0.53 >More info 0.23 >More info wt seedling Original data GEO bulk
44 Col-0 wt Hypoxic 0.26 >More info 0.50 >More info Col-0 wt Aerobic hypoxic treatment Original data GEO bulk
45 Aerobic e1 ate2 0.21 >More info 0.53 >More info Aerobic Col-0 aerobic (normal) conditions seedlings Original data GEO bulk
46 root - 01% oxygen - 30min 0.22 >More info 0.51 >More info root - 21% oxygen - 30min Original data GEO bulk
47 35S:VND7-VP16-GR+CHX -0.12 >More info -0.61 >More info harboring empty vector+CHX 10mM cycloheximide (CHX) 6hrs whole seedlings Original data GEO bulk
48 MPK6 ox Shoot Hypoxia 0.09 >More info 0.63 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
49 Leafminer damaged seedlings 0.15 >More info 0.56 >More info Healthy seedlings leaves Original data GEO bulk
50 eto1-4 0.15 >More info 0.55 >More info Col-0 whole seedling Original data GEO bulk
51 oas-a1.1 Cd 18h 0.20 >More info 0.50 >More info Cd 18h root Root Original data GEO bulk
52 Cor hrpS 10h 0.12 >More info 0.58 >More info Mock 10h Cor hrpS Original data GEO bulk
53 opr3 OPDA 0.5 h 0.14 >More info 0.53 >More info opr3 0 h Original data GEO bulk
54 AtMYB30-ox T0 -0.12 >More info -0.55 >More info WT T0 Original data GEO bulk
55 WT Shoot Hypoxia 0.09 >More info 0.57 >More info WT Shoot Normoxia (mock) Hypoxia Shoot Original data GEO bulk
56 bbx24 in Simulated Shade -0.51 >More info -0.13 >More info WT in simulated shade shade seedling Original data
57 Col-0 2HS 0.12 >More info 0.52 >More info Col-0NS 2 h hypoxia stress (2HS) 7-day-old seedlings Original data
58 tunicamycin -0.12 >More info -0.51 >More info DMF Original data GEO bulk
59 Col0-PsmES4326-24hpi 0.02 >More info 0.61 >More info Col0-mock-24hpi leaf Original data GEO bulk
60 2hr continuous KNO3 ECR cell -0.09 >More info -0.53 >More info 2hr KCl control ECR cell Epidermis&Cortex root cells Original data GEO bulk
61 Laer pretreat GA Flg22 1h -0.10 >More info 0.71 >More info Laer pretreat water control leaf discs Original data GEO bulk
62 WT 2-4h Xanthomonas 0.08 >More info 0.53 >More info WT T0 Original data GEO bulk
63 IAA7mII over-expressor IAA Treated -0.10 >More info 0.69 >More info empty vector IAA Treated Original data GEO bulk
64 amiRAP aerobic -0.08 >More info -0.50 >More info WT aerobic aerobic Original data GEO bulk
65 short 17-degree- -0.02 >More info -0.55 >More info control short Original data GEO bulk
66 sng1 0.01 >More info 0.56 >More info WT aerial region Original data GEO bulk
67 24h light (+Lincomycin) -0.50 >More info 0.03 >More info 24h light (-Lincomycin) seedlings Original data GEO bulk
68 NJ15 -0.16 >More info 0.60 >More info mock sprayed with 1 µM NJ15 and were gravistimulated by turning then 9° relative to the first direction for 8h after grown vertically for 4 days on MS plates Seedlings Original data
69 CCA1-ox 6am non-polysomal -0.08 >More info 0.51 >More info WT 6am non-polysomal aerial part Original data
70 root - 04% oxygen - 2h -0.33 >More info 0.72 >More info root - 21% oxygen - 2h Original data GEO bulk
71 roottip hypoxia total -0.17 >More info 0.55 >More info roottip control total Original data GEO bulk
72 SHR-GR Time 3H Dex 0.28 >More info -0.63 >More info SHR-GR Time 0H Dex Dex media for 3 hours Original data GEO bulk
73 root - 08% oxygen - 2h -0.27 >More info 0.61 >More info root - 21% oxygen - 2h Original data GEO bulk
74 Red/FR Light45min -0.28 >More info 0.61 >More info FarRed Light 45min Original data Light treatments
75 root - 08% oxygen - 30min -0.39 >More info 0.50 >More info root - 21% oxygen - 30min Original data GEO bulk