4.0:Analysis result - correlation network
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Module-based correlation network(MCN) centered on pmr5
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List of experiments correlated with "pmr5"
Download transcriptome of top 30
Score
Experiment
Correlation from
pmr5
Correlation to
pmr5
Control Experiment
Genotype
Treatment
Tissue
Link to
original data
Experimental
Category
Data set
Details
1
pmr5
1.00
>More info
1.00
>More info
Col-0
rosette
Original data
GEO bulk
2
pmr5
0.74
>More info
0.70
>More info
Col-0
Original data
GEO bulk
3
pmr5 pmr6
0.75
>More info
0.66
>More info
Col-0
Original data
GEO bulk
4
camta3-1
0.59
>More info
0.53
>More info
WT
Original data
GEO bulk
5
Elevated CO2 leaf primordia
0.60
>More info
0.49
>More info
Ambient CO2 leaf primordia
leaf primordia
Original data
6
bri1-116
0.32
>More info
0.73
>More info
Col
seedling
Original data
GEO bulk
7
3x(p)
0.37
>More info
0.67
>More info
2x
two week old seedlings
Original data
8
3x(m)
0.38
>More info
0.63
>More info
2x
two week old seedlings
Original data
9
S58-2
0.53
>More info
0.47
>More info
wt
Original data
GEO bulk
10
Col ozone 3h
0.39
>More info
0.61
>More info
Col clean-air 3h
ozone
Original data
GEO bulk
11
CMV-WT
0.51
>More info
0.48
>More info
Mock-At
Aerial tissues
Original data
GEO bulk
12
Col BTH
0.29
>More info
0.67
>More info
Col
rosettes
Original data
GEO bulk
13
UV Stress 24 h (shoot)
0.42
>More info
0.53
>More info
Stress mock 24 h (shoot)
Original data
Stress treatments
14
vtc2 (I)
0.42
>More info
0.51
>More info
Col (I)
rosette
Original data
GEO bulk
15
CT101 ozone
0.65
>More info
0.27
>More info
CT101 ctrl
350 ppb ozone exposure for 2hr
whole rosette
Original data
16
Laer pretreat JA Flg22 0h
-0.21
>More info
-0.70
>More info
Laer pretreat water control
leaf discs
Original data
GEO bulk
17
C24 ozone
0.60
>More info
0.30
>More info
C24 ctrl
350 ppb ozone exposure for 2hr
whole rosette
Original data
18
E.orontii Infection 3 day
0.20
>More info
0.70
>More info
Uninfection 3 day
Original data
Elicitor treatments
19
flu dark 8hours/30 minute light
0.36
>More info
0.53
>More info
col dark 8hours/30 minute light
Original data
GEO bulk
20
Day Time Treatment
-0.35
>More info
-0.54
>More info
Day Time Control
1hr white light pulse
aerial rosette
Original data
21
AAF-OX
0.36
>More info
0.51
>More info
Col-0
Rosette leaf
Original data
GEO bulk
22
Col-0 ozone- (control genotype tga2 tag5 tga6)
0.64
>More info
0.22
>More info
Col-0 ctrl (control genotype tga2 tag5 tga6)
350 ppb ozone exposure for 2hr
Original data
23
+1.6 mM Tween 20 1 h.
0.26
>More info
0.60
>More info
+distilled water 1 h.
Original data
GEO bulk
24
Ws 100mM NaCl
0.67
>More info
0.18
>More info
Ws 0mM NaCl
100mM NaCl
leaf
Original data
GEO bulk
25
Ws leaf 100mM NaCl
0.67
>More info
0.18
>More info
Ws leaf 0mM NaCl
leaf
Original data
GEO bulk
26
opr3 JA 0.5 h
0.14
>More info
0.71
>More info
opr3 0 h
Original data
GEO bulk
27
Col leaf 100mM NaCl
0.51
>More info
0.33
>More info
Col leaf 0mM NaCl
leaf
Original data
GEO bulk
28
Col leaf 100mM NaCl
0.51
>More info
0.33
>More info
Col leaf 0mM NaCl
leaf
Original data
GEO bulk
29
Col 100mM NaCl
0.51
>More info
0.33
>More info
Col 0mM NaCl
100mM NaCl
leaf
Original data
GEO bulk
30
Col-0 RNAi-MBS2/mbs1-1 HL 3h
-0.23
>More info
-0.59
>More info
Col-0 WT HL 3h
HL stress (1 µE m−2 s−1)
whole seedlings without root
Original data
31
Heat shock optimum
0.16
>More info
0.65
>More info
Heat shock baseline
Photosynthesis at optimum temperature
leaf first fully expanded
Original data
GEO bulk
32
Col(gl) 0mM NaCl
0.51
>More info
0.29
>More info
Col 0mM NaCl
0mM NaCl
leaf
Original data
GEO bulk
33
Col(gl) leaf 0mM NaCl
0.51
>More info
0.29
>More info
Col leaf 0mM NaCl
leaf
Original data
GEO bulk
34
petiole in D
0.30
>More info
0.50
>More info
petiole in WL
petioles
Original data
GEO bulk
35
Col-0 INA 48h
0.22
>More info
0.57
>More info
Col-0 MOCK 48h
Original data
GEO bulk
36
ckh1 CK0
0.53
>More info
0.24
>More info
WT (Ler) CK0
cultured for 3 days on CIM containing 100 ng/ml 2 4-D in the absence of kinetin.
tissue culture
Original data
GEO bulk
37
Shoot apex inflorescence (after bolting)
0.12
>More info
0.65
>More info
Control for tissue data
Original data
Developmental series; organs / tissues at different ages
38
Infected pft1 leaf
0.21
>More info
0.56
>More info
Infected Col-0 leaf
F. oxysporum
leaf
Original data
GEO bulk
39
OsSAP11 expressing
-0.24
>More info
-0.53
>More info
WT
seedlings
Original data
GEO bulk
40
Laer pretreat GA Flg22 1h
0.05
>More info
0.71
>More info
Laer pretreat water control
leaf discs
Original data
GEO bulk
41
Col0-PsmES4326-24hpi
0.15
>More info
0.61
>More info
Col0-mock-24hpi
leaf
Original data
GEO bulk
42
Leafminer damaged seedlings
0.20
>More info
0.56
>More info
Healthy seedlings
leaves
Original data
GEO bulk
43
seedling 1.5h after HZE atm-1
0.22
>More info
0.54
>More info
seedling day 1 unirradiated atm-1
1.5h
Original data
44
Atwrky40 high light
0.62
>More info
0.13
>More info
Col0 high light
high light for 1h at 1000 μE m-2s-1
leaf
Original data
GEO bulk
45
wavy
0.17
>More info
0.57
>More info
WT
Original data
GEO bulk
46
camta1-2
0.17
>More info
0.57
>More info
Col-0-WT
Original data
GEO bulk
47
Col upon hypoxia 6 hrs
0.52
>More info
0.21
>More info
Col upon normoxia
hypoxia
seedling roots
Original data
GEO bulk
48
PNO8 12 h
0.20
>More info
0.53
>More info
Mock 12 h
Original data
Effect of other inhibitors on seedlings
49
leaf blade in FRD
0.23
>More info
0.50
>More info
leaf blade in WL
leaf blades
Original data
GEO bulk
50
ptpks2
-0.09
>More info
-0.64
>More info
Col-WT
leaves
Original data
GEO bulk
51
Red Light 4 h
0.17
>More info
0.55
>More info
White Light 4 h
Original data
Light treatments
52
IAA7mII over-expressor IAA Treated
0.03
>More info
0.69
>More info
empty vector IAA Treated
Original data
GEO bulk
53
vtc1-1
-0.12
>More info
-0.60
>More info
Col-0
whole plant
Original data
GEO bulk
54
HARAP aerobic
-0.15
>More info
-0.57
>More info
WT aerobic
aerobic
Original data
GEO bulk
55
Shoot dark control 7h
0.19
>More info
0.51
>More info
Shoot light control
7 h non-submerged dark condition
whole shoot
Original data
GEO bulk
56
tetraploid
0.13
>More info
0.57
>More info
diploid
Original data
GEO bulk
57
low CO2 + light
0.14
>More info
0.54
>More info
normal CO2 + light
Original data
GEO bulk
58
A. halleri highZn-root
-0.59
>More info
-0.09
>More info
A. petraea highZn-root
Original data
GEO bulk
59
siliques AtHb1 control
0.14
>More info
0.52
>More info
siliques WT control
control
silique
Original data
GEO bulk
60
(Col-0)+100 uM As
0.50
>More info
0.15
>More info
(Col-0)+0 uM As
treated with 100 uM As
Roots
Original data
GEO bulk
61
(Col-0)+200 uM As
0.54
>More info
0.10
>More info
(Col-0)+0 uM As
treated with 200 uM As
Roots
Original data
GEO bulk
62
12m.KNO3
0.11
>More info
0.53
>More info
To.
KNO3
14 day old Roots
Original data
GEO bulk
63
sni1
0.12
>More info
0.52
>More info
WT
Original data
GEO bulk
64
Elevated CO2 AMPLE N DAY
0.00
>More info
0.64
>More info
Ambient CO2 AMPLE N DAY
Youngest Most Fully Expanded Leaf
Original data
65
15m.KNO3
0.11
>More info
0.52
>More info
To.
KNO3
14 day old Roots
Original data
GEO bulk
66
hrpA fliC 7h
0.10
>More info
0.53
>More info
Mock 7h
hrpA fliC
Original data
GEO bulk
67
cpr5scv1
0.03
>More info
0.58
>More info
WT(COL)
Original data
GEO bulk
68
t-zeatin 0.5 h
-0.05
>More info
-0.55
>More info
Mock 0.5 h
Original data
Basic hormone treatment of seedlings
69
root columella root cap pH4.6
0.53
>More info
0.06
>More info
root columella root cap pH5.7
Original data
GEO bulk
70
Rose Bengal 0.5 uM
0.08
>More info
0.51
>More info
Control RB and PER
Rose Bengal
Original data
71
mkk2 24h BTH rep
0.03
>More info
0.54
>More info
Col-0 24h BTH rep
Original data
GEO bulk
72
WT+chitooctaose
0.00
>More info
0.57
>More info
WT+water
chitooctaose
seedlings
Original data
GEO bulk
73
seed germinating in countinuous light 24h SL
-0.11
>More info
0.67
>More info
Control for tissue data
seed
Original data
GEO bulk
74
4C 1h
0.03
>More info
0.53
>More info
4C 0h
Original data
GEO bulk
75
Mutant coi1(leaf)
-0.02
>More info
-0.53
>More info
Col-0 (leaf)
Original data
GEO bulk
76
A. thaliana-A. lyrata hybrid
-0.03
>More info
-0.52
>More info
A. thaliana
mature leaves before flowering
Original data
GEO bulk
77
short 17-degree-
0.07
>More info
-0.61
>More info
control short
Original data
GEO bulk
78
WT drought
-0.06
>More info
0.57
>More info
WT control
All aerial tissue
Original data
GEO bulk
79
Red/FR Light45min
-0.56
>More info
0.06
>More info
FarRed Light 45min
Original data
Light treatments
80
Leaf wounded
-0.65
>More info
0.15
>More info
Leaf control
vegetative leaf
Original data
GEO bulk
81
whole roots -Fe 6 hour
-0.02
>More info
0.52
>More info
whole roots standard
Original data
GEO bulk
82
35S:RPS4 rrs1-11 T0
-0.04
>More info
0.54
>More info
35S:RPS4 T0
leaves
Original data
83
chito-octamer
-0.03
>More info
0.52
>More info
Col Mock
Original data
GEO bulk
84
sid2-1 cold
0.13
>More info
-0.62
>More info
WT cold
3 week cold
entire aerial part
Original data
GEO bulk
85
Atwrky40
0.56
>More info
-0.08
>More info
Col0
none
leaf
Original data
GEO bulk
86
short 14-degree-
0.15
>More info
-0.62
>More info
control short
Original data
GEO bulk
87
leaf blade in D
-0.06
>More info
0.52
>More info
leaf blade in WL
leaf blades
Original data
GEO bulk
88
Mh0 UV
-0.50
>More info
0.05
>More info
Mh0 mock
UV
seedling
Original data
89
-Sulfate 24 h
0.16
>More info
-0.57
>More info
Mock 24 h (1500uM sulfate)
Original data
Response to sulfate limitation
90
cat2-long-day 2d
0.12
>More info
-0.52
>More info
Col0-LD2
transferred to air (400 ppm) for 2 days in long day regime (16h light/8h dark)
rosette leaf material
Original data
GEO bulk
91
P.syringae vir 4 h (leaf)
-0.12
>More info
0.51
>More info
Mock 4 h (leaf)
Original data
Elicitor treatments
92
WT Root Hypoxia
0.50
>More info
-0.12
>More info
WT Root Normoxia (mock)
Hypoxia
Root
Original data
GEO bulk
93
myb61 xylem
-0.13
>More info
0.51
>More info
wt xylem
xylem
Original data
GEO bulk
94
triploid female excess
0.23
>More info
-0.61
>More info
tetraploid
Original data
GEO bulk
95
ara1/2mut
-0.28
>More info
0.61
>More info
Col-3
Original data
GEO bulk
96
CCA1-ox 6am non-polysomal
-0.19
>More info
0.51
>More info
WT 6am non-polysomal
aerial part
Original data